Item | Value |
---|---|
gene id | XLOC_020667 |
gene name | bysl |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007133.7 |
NCBI id | CM002906.2 |
chromosome length | 39133080 |
location | 550828 ~ 557965 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
bysl | Predicted to enable snoRNA binding activity. Predicted to be involved in rRNA processing. Predicted to be part of preribosome, small subunit precursor. Predicted to be active in cytoplasm and nucleolus. Is expressed in several structures, including alar plate midbrain region; musculature system; nervous system; pectoral fin bud; and segmental plate. Orthologous to human BYSL (bystin like). |
id | name | namespace |
---|---|---|
GO:0006364 | rRNA processing | biological_process |
GO:0030688 | preribosome, small subunit precursor | cellular_component |
GO:0005634 | nucleus | cellular_component |
GO:0005730 | nucleolus | cellular_component |
GO:0005737 | cytoplasm | cellular_component |
GO:0030515 | snoRNA binding | molecular_function |
id | description |
---|---|
ko03009 | Ribosome biogenesis |
id | description |
---|---|
ZDB-GENE-040426-1287 | Predicted to enable snoRNA binding activity. Predicted to be involved in rRNA processing. Predicted to be part of preribosome, small subunit precursor. Predicted to be active in cytoplasm and nucleolus. Is expressed in several structures, including alar plate midbrain region; musculature system; nervous system; pectoral fin bud; and segmental plate. Orthologous to human BYSL (bystin like). |
ensembl_id | ENSDARG00000001057 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00040868 | True | 1504 | mRNA | 0.59 | 7 | 550828 | 557965 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_020666 | ccnd3 | coding | downstream | 3068 | 537717 ~ 547760 (-) |
XLOC_020665 | dstyk | coding | downstream | 44306 | 472327 ~ 506522 (-) |
XLOC_020664 | NA | coding | downstream | 154928 | 392619 ~ 395900 (-) |
XLOC_020663 | CABZ01072989.1 | coding | downstream | 158604 | 387073 ~ 392224 (-) |
XLOC_020662 | ora3 | coding | downstream | 167873 | 381143 ~ 382955 (-) |
XLOC_020668 | tmcc2 | coding | upstream | 33844 | 591809 ~ 600016 (-) |
XLOC_020669 | cdkn1a | coding | upstream | 45417 | 603382 ~ 607812 (-) |
XLOC_020670 | srsf3b | coding | upstream | 55300 | 613265 ~ 622967 (-) |
XLOC_020671 | apobec2a | coding | upstream | 83377 | 641342 ~ 651719 (-) |
XLOC_020672 | NA | coding | upstream | 101952 | 659917 ~ 697504 (-) |
XLOC_020657 | NA | non-coding | downstream | 235448 | 313710 ~ 315380 (-) |
XLOC_020646 | NA | non-coding | downstream | 449381 | 101082 ~ 101447 (-) |
XLOC_020641 | NA | non-coding | downstream | 514712 | 27146 ~ 36116 (-) |
XLOC_020673 | NA | non-coding | upstream | 142248 | 700213 ~ 704907 (-) |
XLOC_020675 | NA | non-coding | upstream | 175279 | 733244 ~ 735244 (-) |
XLOC_020676 | NA | non-coding | upstream | 181335 | 739300 ~ 760886 (-) |
XLOC_020684 | NA | non-coding | upstream | 460380 | 1018345 ~ 1023531 (-) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
grasscarp (Ctenopharyngodon idella) | CI01111264_00004416_00006717 | BYSL | coding | CI01111264 | null | 4416 ~ 6717 (+) |
bowfin (Amia calva) | AMCG00014035 | NA | coding | CM030125.1 | CM030125.1 | 49697861 ~ 49703373 (-) |