Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110501774 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 63968729 ~ 63971324 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| complement C1q-like protein 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110501774 | True | 896 | mRNA | 0.49 | 3 | 63968729 | 63971324 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501772 | LOC106560973 | coding | downstream | 4760 | 63958607 ~ 63963969 (-) |
| nuak1b | LOC106560975 | coding | downstream | 64611 | 63873240 ~ 63904118 (-) |
| appl2 | LOC106560977 | coding | downstream | 207316 | 63745050 ~ 63761413 (-) |
| LOC118941165 | NA | coding | downstream | 250562 | 63717837 ~ 63718167 (-) |
| LOC118944230 | NA | coding | downstream | 455859 | 63512730 ~ 63512870 (-) |
| tmem117 | LOC106573612 | coding | upstream | 130732 | 64102056 ~ 64170220 (-) |
| LOC110493646 | irak4 | coding | upstream | 208957 | 64180281 ~ 64188853 (-) |
| tesmin | LOC106560967 | coding | upstream | 418827 | 64390151 ~ 64400478 (-) |
| LOC110493697 | LOC106561117 | coding | upstream | 434736 | 64406060 ~ 64410316 (-) |
| ppp6r3 | NA | coding | upstream | 479978 | 64451302 ~ 64469833 (-) |
| G170356 | NA | non-coding | downstream | 64651 | 63509607 ~ 63904078 (-) |
| G170625 | NA | non-coding | downstream | 108866 | 63859632 ~ 63859863 (-) |
| G170573 | NA | non-coding | downstream | 224443 | 63741903 ~ 63744286 (-) |
| G170520 | NA | non-coding | downstream | 233379 | 63733310 ~ 63735350 (-) |
| G170569 | NA | non-coding | downstream | 237031 | 63731314 ~ 63731698 (-) |
| G171118 | NA | non-coding | upstream | 32948 | 64004272 ~ 64011133 (-) |
| G171136 | LOC106560972 | non-coding | upstream | 113064 | 64084388 ~ 64085551 (-) |
| G171265 | NA | non-coding | upstream | 230588 | 64201912 ~ 64202219 (-) |
| G171279 | NA | non-coding | upstream | 250050 | 64221374 ~ 64222667 (-) |
| G171378 | NA | non-coding | upstream | 407683 | 64379007 ~ 64381802 (-) |
| LOC110493507 | LOC106560984 | other | downstream | 817878 | 63146769 ~ 63224837 (-) |
| G168141 | NA | other | downstream | 2453073 | 61515237 ~ 61515656 (-) |
| G168078 | NA | other | downstream | 2477058 | 61490434 ~ 61491671 (-) |
| LOC110493186 | mlkl | other | downstream | 2668637 | 61290149 ~ 61303507 (-) |
| G172141 | NA | other | upstream | 1114248 | 65085572 ~ 65086188 (-) |
| G173121 | NA | other | upstream | 1412113 | 65383437 ~ 65383873 (-) |
| zcchc14 | zcchc14 | other | upstream | 1563147 | 65530911 ~ 65571025 (-) |
| G173370 | LOC106560927 | other | upstream | 1862017 | 65833341 ~ 65839074 (-) |
