klhdc4 (klhdc4)


Basic Information

Item Value
gene id klhdc4
gene name klhdc4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 65651079 ~ 65665571 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021568459.2
GTGAACCGCGCTTGTCTGTGGAAGTACATGTGAGTTTATTTAGCTGGACAATTTCCATGTGGTTCTGATTCAACAACTGATTCAAAGCTAATCTGTAGCTAGTACTGTCCTGTAAAAATGGGCAAAAAGGGTAAAAAAGAGCAAAAGAAAGTGAAAGGAGCAGAGAAGACAGCAGCCAAAATGGATAAAAAGATTTCAAAGCGGTCTAAACGAGAAGAGGAGGACCTGGCTGCGCTGATAGCTGAGTTTCAGTCCTTGGATGCAAAGAAGACAACGGTTGTGGAGACCGCCTGCCCGCCCCCCTCACCCAGGTTGAACGCCTCACTGTCAGCACACCCCGACAAGGATGAGCTGATCTTGTTTGGAGGCGAGTTCTTCAATGGCAAAAAGACGTACCTCTACAATGACCTGTTCTTCTATAACTTAAAGAAGAACACCTGGGTGAAGTCAgacatccccaaccctcctccaCGACGCTGTGCTCACCAGgcggTGGTAGTTCCCCAGGCAGGGGGGCAGCTGTGGTTGTTTGGAGGGGAGTTTGCGTCTCCTGACGGGGAGCAGTTCTACCACTATAAAGACCTCTGGGTTCTTCACCTCTCCACAAACACCTGGGAGCAGATCAAGGTTCCAGGTGCCCCCTCTGGTAGGAGTGGACATCGTATGGTCCTGAGTAAGAGGCAGTTGCTGGTGTTCGGAGGCTTCCACGAAAGTGCTAGGGATTTTATCTACTACAACGATGTACACGCCTTCAGTCTGGACTCCTTCACCTGGAGTCGCCTCTCCCCCTCCGGCACTGGCCCCTCCCCTCGCTCAGCCTGCCAGATGACCTCTACCCCCGATGGCTCCGGGGTCATCATCTACGGAGGATACTccaaagtgAAAGCTAAGAAAGATGTGGAAAAGGGAACCATCCACTCTGACATGTTTCTCCTCAAGAGAGATGGCAAAGAAGAACAAGAGAAGTGGTTGTGGTCCCGGGTGAGTCCCTCAGGCTCCAAGCCACCTGCCCGGTCGGGCTTCTCCCTGGCTGTGGGGCCCACGGGCCGGGCGCTGCTCTTCGGAGGGGTGTGTGACGAGGAGGAAGATGAAACTCTGGAGGGGGACTTCTACAACGACCTTTACCTGTATGACATCAACAAGCACCGCTGGTTCCCTGCTCAGCTCAAGGGCTGTAAGTCGGAGAAGAAGAAGCGTCGAAGGgggaagaagggaggggagacaggggaggggtCAGGGGAGGGTCAGGAGGAGGAAGGAGCAGCAGCACAGGGACCTGTGGAGGTCATCAAGGAGATCGTCACTGAAGACGGAACAGTCATGACCATCAAGGAAATAATCCCCGGGACACaggtggaggaagagagtgaggaagaggaggaaggtgaggaaGGTGCCTCGGCCATACTTGTCGAGCCCTGTGCTCGCTCCAGTGCCATGGCAACAGTGAAATATGGGAAGCTGTATTTGTACGGGGGCATGTTTGAGGTGGGTGACCGCCAGTTCACCCTCAACGACCTGTACTGTCTGGACCTCCACAAGATGGACCAGTGGGAGGTGCTGGTCGAGATGGACCCCAAGACCCAAGAGTGGCTGGATGACTGGTCTGACTcagaggatgatgaggagggagatgaagaggaggcTAAAGGAGGTGATGACGAAGAGGAGGAATCTGAAGAAGAAAGTGACGAACAGGATGAGGAGGATCACCCCCCAGTGCAGCCAGGTGAGGCGCTGGAAGACTTCCAGAGCCGTACAGAGCAATACTGGGTAGGCCAGGCCCGGGCCAACATGGGCCCAGAGGCTAAGGACACGAAGGTGCAGAAAGTGGGCATAGCCATGGCCAAGGTGTTCTATGAAGACCAGCAGTGAGCCAGGGTGTATGTGTATCTGCcttctttgtttgtttgtttgtgtgtgtgtgtgtgtgtgtgagacaggtgGAGAGTGATAGTTTGTCATAGGGAAAAATGAGGGTACTCATCAGTGTttcaactccagtcctcaagtaccccccccctccccccaacagcacacatttgtATTGTAGCcacggacaagcacacctgattcaacttatcaactaatcatcaagacctcaatgagttgaatcaggttagtttgtttggggctacaacaaaaatgtacgcggttgggggtactcaaggactggagttgggaaccactgatgaGTATCCTCATTCTTCCCAATGGCACATTATTAGAGTTGGAAAACACTTCTTTAAACTGAAGAGGCCAATTAAATAATTTCTCTGCTTAGTGAACATTTTCTGCCCTCATAACCATCCATGCCTTTGTACAGTAGGCCTAACTGTGCAAGAAAATATGCTGCTGTTTTGGCAGTTGGACTACACTGCAGTATGTATACTGTATCGTATTTGGAATTAGTTTCTAGTTTCATATCTTCAAGAAGATGGTCAGAAAATCCTTGTCATTGCTCACCCCCTTTGATTATTGTTTTCTAAACCAATTTGTCATTAAACATCCAACCATAATACTTC

Function

symbol description
klhdc4 Orthologous to human KLHDC4 (kelch domain containing 4).

NR:

description
kelch domain-containing protein 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021568459.2 True 2525 mRNA 0.51 12 65651079 65665571

Neighbor

gene id symbol gene type direction distance location
zcchc14 zcchc14 coding downstream 80054 65530911 ~ 65571025 (-)
det1 LOC106560940 coding downstream 142013 65487387 ~ 65509066 (-)
ntrk3a LOC106560958 coding downstream 285080 65111274 ~ 65365999 (-)
LOC110493816 LOC106560960 coding downstream 803011 64802877 ~ 64848068 (-)
LOC118937287 NA coding downstream 872040 64777758 ~ 64779039 (-)
slc7a5 slc7a5 coding upstream 19690 65685261 ~ 65715957 (-)
LOC110493906 ca5a coding upstream 65160 65730731 ~ 65752045 (-)
LOC110493917 LOC106560931 coding upstream 97150 65762721 ~ 65778516 (-)
ccdc135 drc7 coding upstream 116759 65782330 ~ 65792797 (-)
usb1 usb1 coding upstream 156086 65821657 ~ 65829740 (-)
G173201 jph3 non-coding downstream 30707 65608539 ~ 65620372 (-)
G173239 NA non-coding downstream 75764 65574375 ~ 65575315 (-)
G173214 NA non-coding downstream 125951 65524422 ~ 65525128 (-)
G173309 NA non-coding upstream 28213 65693784 ~ 65694028 (-)
G173326 NA non-coding upstream 56550 65722121 ~ 65722321 (-)
G173328 NA non-coding upstream 58388 65723959 ~ 65724172 (-)
G173349 NA non-coding upstream 134321 65799892 ~ 65803350 (-)
G173393 NA non-coding upstream 209643 65875214 ~ 65877945 (-)
G173121 NA other downstream 267206 65383437 ~ 65383873 (-)
G172141 NA other downstream 564891 65085572 ~ 65086188 (-)
tmem117 LOC106573612 other downstream 1482681 64102056 ~ 64170220 (-)
LOC110501772 LOC106560973 other downstream 1687258 63958607 ~ 63963969 (-)
G173370 LOC106560927 other upstream 167770 65833341 ~ 65839074 (-)
G173431 NA other upstream 256279 65921850 ~ 65922229 (-)
LOC110494122 LOC106560915 other upstream 612250 66277821 ~ 66299637 (-)
G173675 NA other upstream 669841 66335412 ~ 66338386 (-)
G173696 LOC106560906 other upstream 709655 66375226 ~ 66390766 (-)

Expression


Co-expression Network