pla2g15 (lypa3)


Basic Information

Item Value
gene id pla2g15
gene name lypa3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 65812230 ~ 65821040 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021568592.2
TGAAGATCCCTAACTAGTTGCATTGACGGGGTGCCAGGCTGTCTCCACAATTGCCATGTGATTACTTAACTCGGGTCAGAATCGGGAAAATAAGACTTGTGCAATGTAAACCCTTTGTCCTTCACAAAAGGGACCAATCTGAGGTGTGTAGCTCAAATCGTTCGCCAGCTATTGAAGTTTGGAGGTCCGAATGTCTGGCGAATAGCGAATCTCAAGCCAACTTTTCCAGGGTGGGGGACTAGTGTTATGAGTGAATGGGAGAAATGGTATCCTGTGGGTTGACTAGCCCAGCGCTCTTCCAGCTGTGTTTGTTGTTGATTTTGGTACCATACATCAAAGGCAGAACATTTGAGAAATGTCTCCCGGGCAATGCATGTCGATCGGAAAAACCTCCAGTAGTTCTAATTCCTGGGGACCTGGGGAACCAGCTGGAGGCCAAGCTGGACAAGCCCAGCGTGGTTCACTACATCTGCTACAAAAAGACTGACGCCTACTTCACATTATGGCTCAACCTGGAACTGATGGTGCCGGTGGCCATTGACTGCTGGATTGACAACATAAGACTGATTTATAACCGTACAACAAGGCAGACAGAAGCACCTCCGGGGGTAGATGTCAGAGTGCCTGGCTTTGGACAGACCTTCCCTCTGGAATACCTTGACCCTAGCAAGGGCGATGTTGGTGTGTATTTCTTCAACATAGTGCAGGCACTGGTGGAGTGGGGATACACCAGAGATGACGATGTTCGAGGAGCTCCGTATGACTGGCGTAAAGCTCCAAATGAGAACAAAGCCTACTTTTTGAGACTGCAACATATGATTGAGGAGATGGCCGTGAAGGCTAGGGGTCCGGTTGTCCTGATAGCCCACAGCATGGGGAACATGTACACCCTGTATTTCCTGAACCATCAGCCCCAGGCCTGGAAGGATCGCTACATCAAGGCCTTTGTGTCCCTGGGTGCACCTTGGGCTGGTGTGGCTAAAACCCTGAGAGTTGTGGCTTCTGGTGATAATAACCGTATCCCAGTCATCAGTTCACTAGAGATCCGCTCACAGCAGCGCTCTGCGGTCTCAACCACATGGCTGTTCCCATACGCACATTCCTGGCCTGCTGACAAGGTGCTAATCCAAACACCCACCACCAACTACACAGTGAAGGACTACCAACGCTTCTTCAAGGATATCGACTTTGAAGATGGCTGGGAGATGCGTCAAGACACTGAACCACTGGTCAGTGCACTAGAGCCCCCTGGGGTGGCCATACACTGTCTTTATGGCAGCGGAGTGGCCACAGCAGAGGGTTTTCTCTACACTATCTTTCCTGATACAGACCCCACACTGATTCTCGGAGATGGGGATGGGACGGTCAACCTGCTGAGTGCCACCCAGTGCAAGCGTTGGATAGGCCACCAGACACAGCCTGTCCATATGTTTGAACTGGAGGGGAATGAGCATGTGGCCATGTTGCGCAACTTTACCACAGTAACCTACATCAAGACTGTGCTCTTTGGCCCTTGAGCAACCTTAACCAACTACTGCCCCTCGTCTTGCTGTCTTAAGTGACAAATTCACAAAGATAAAGAACGGGGATAGTACAAAGAGAGAACTGATAGGCATTTGCACACATGACGGTCTCAGAGCCTGAGGAGGAATTGATGACGGCACTGAATGTTTTATCCTATTTTAAATGATCCCCTCAGCAGACATTTGCTGTTTTTCCAAATTTGTACTATGTTAATTGATAATATTTGTAAAGGTCTTTCCCCAATTAACTCAGATTTCCAGGTTGTAACAGTTTACTAGGTGAATTAGCAGCCGTAAGCTGATGAATTAATAAAATCAGGGTCTTGTTGTCGATGCTGGATTGCTTACAGGACAGGAAGACGTGGTCTGATCACCTTGATTGTAACTATGCCATTGCGCTATGGTTGGACTTGAACAATATATTGCTGGAACTATCATGATCTGTGTGTTGTGACGATTAAGTAAAATATAATGTTAAACATTGCATTAAGCCA

Function

NR:

description
group XV phospholipase A2-like

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0008374 O-acyltransferase activity molecular_function

KEGG:

id description
K06129 LYPLA3; lysophospholipase III

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021568592.2 True 2017 mRNA 0.48 6 65812230 65821040

Neighbor

gene id symbol gene type direction distance location
lcat LOC106560930 coding upstream 10258 65792589 ~ 65801972 (+)
jph3 jph3 coding upstream 163570 65593468 ~ 65648660 (+)
map1lc3b map1lc3b coding upstream 275448 65531126 ~ 65536787 (+)
LOC110493825 LOC106560959 coding upstream 787365 64866284 ~ 65024865 (+)
akap13 LOC106560961 coding upstream 1052837 64666135 ~ 64759393 (+)
znf319b LOC106560927 coding downstream 9075 65830115 ~ 65839097 (+)
LOC110493986 csnk2a2 coding downstream 31465 65852505 ~ 65865705 (+)
LOC110493994 fa2h coding downstream 63753 65884793 ~ 65917366 (+)
LOC110494001 LOC106560924 coding downstream 122119 65943159 ~ 65958750 (+)
LOC110494008 LOC106560923 coding downstream 154705 65975745 ~ 66031253 (+)
G172525 NA non-coding upstream 77802 65730812 ~ 65734428 (+)
G172536 NA non-coding upstream 93565 65718453 ~ 65718665 (+)
G172535 NA non-coding upstream 93937 65717922 ~ 65718293 (+)
G172531 NA non-coding upstream 99792 65711596 ~ 65712438 (+)
G172510 NA non-coding upstream 127736 65684102 ~ 65684494 (+)
G172581 NA non-coding downstream 19262 65840302 ~ 65840526 (+)
G172582 NA non-coding downstream 21208 65842248 ~ 65845537 (+)
G172583 NA non-coding downstream 25957 65846997 ~ 65847232 (+)
G172586 NA non-coding downstream 27913 65848953 ~ 65849166 (+)
G172592 NA non-coding downstream 48289 65869329 ~ 65870268 (+)
G170150 LOC106560975 other upstream 1933997 63873248 ~ 63878233 (+)
G170131 NA other upstream 1981910 63820461 ~ 63830320 (+)
G169130 NA other upstream 3026587 62785358 ~ 62785643 (+)
G172639 NA other downstream 114556 65935596 ~ 65936133 (+)
LOC110494096 LOC106561115 other downstream 441586 66262594 ~ 66266024 (+)
G173938 LOC106573687 other downstream 920780 66741820 ~ 66742213 (+)
LOC110494451 zfpm1 other downstream 1134484 66900017 ~ 66995521 (+)
LOC110494472 utp4 other downstream 1417850 67232278 ~ 67239902 (+)

Expression


Co-expression Network