Gene
RNA
| Item | Value |
|---|---|
| gene id | gins3 |
| gene name | gins3 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 66119926 ~ 66135667 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| gins3 | Acts upstream of or within heart development. Predicted to be located in nucleus. Predicted to be part of GINS complex. Is expressed in alar plate midbrain region; nervous system; optic vesicle; pharyngeal arch; and presumptive neural retina. Orthologous to human GINS3 (GINS complex subunit 3). |
| description |
|---|
| DNA replication complex GINS protein PSF3 |
| id | name | namespace |
|---|---|---|
| GO:0007507 | heart development | biological_process |
| GO:0006260 | DNA replication | biological_process |
| GO:0005634 | nucleus | cellular_component |
| id | description |
|---|---|
| K10734 | GINS3; GINS complex subunit 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021568733.2 | True | 1433 | mRNA | 0.44 | 3 | 66119926 | 66135667 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ldhd | ldhd | coding | upstream | 35897 | 66073291 ~ 66084029 (+) |
| LOC110494008 | LOC106560923 | coding | upstream | 88673 | 65975745 ~ 66031253 (+) |
| LOC110494001 | LOC106560924 | coding | upstream | 161176 | 65943159 ~ 65958750 (+) |
| LOC110493994 | fa2h | coding | upstream | 202560 | 65884793 ~ 65917366 (+) |
| LOC110493986 | csnk2a2 | coding | upstream | 254221 | 65852505 ~ 65865705 (+) |
| LOC110494051 | LOC106560919 | coding | downstream | 9923 | 66145590 ~ 66190766 (+) |
| si:ch211-194m7.8 | LOC106560917 | coding | downstream | 72182 | 66207849 ~ 66210600 (+) |
| smpd3 | LOC106560916 | coding | downstream | 87919 | 66223586 ~ 66256972 (+) |
| LOC110494096 | LOC106561115 | coding | downstream | 126927 | 66262594 ~ 66266024 (+) |
| LOC110494104 | LOC106560914 | coding | downstream | 131183 | 66266850 ~ 66298314 (+) |
| G172658 | NA | non-coding | upstream | 148968 | 65965873 ~ 65970958 (+) |
| G172637 | NA | non-coding | upstream | 190247 | 65929364 ~ 65929679 (+) |
| G172630 | NA | non-coding | upstream | 200708 | 65918913 ~ 65919218 (+) |
| G172592 | NA | non-coding | upstream | 249658 | 65869329 ~ 65870268 (+) |
| LOC110494202 | polr2c | non-coding | downstream | 224330 | 66359803 ~ 66363985 (+) |
| G173804 | NA | non-coding | downstream | 394448 | 66530115 ~ 66530338 (+) |
| G173805 | NA | non-coding | downstream | 394785 | 66530452 ~ 66530710 (+) |
| G173806 | NA | non-coding | downstream | 395999 | 66531666 ~ 66531887 (+) |
| G173808 | NA | non-coding | downstream | 397791 | 66533458 ~ 66533659 (+) |
| G172639 | NA | other | upstream | 183793 | 65935596 ~ 65936133 (+) |
| jph3 | jph3 | other | upstream | 478950 | 65593468 ~ 65648660 (+) |
| map1lc3b | map1lc3b | other | upstream | 583139 | 65531126 ~ 65536787 (+) |
| G170150 | LOC106560975 | other | upstream | 2241693 | 63873248 ~ 63878233 (+) |
| G170131 | NA | other | upstream | 2289606 | 63820461 ~ 63830320 (+) |
| G173938 | LOC106573687 | other | downstream | 606153 | 66741820 ~ 66742213 (+) |
| LOC110494451 | zfpm1 | other | downstream | 819857 | 66900017 ~ 66995521 (+) |
| LOC110494472 | utp4 | other | downstream | 1103223 | 67232278 ~ 67239902 (+) |
| hsbp1b | LOC106561110 | other | downstream | 1350496 | 67486128 ~ 67488205 (+) |
