LOC110533844


Basic Information

Item Value
gene id LOC110533844
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 66637153 ~ 66638202 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002475052.2
tgttgttttttgtcgcactgctttgctttatcttggccaggtcaccgttgtaaatgataacttgttctcagctggcctacttggttaaataaaggtgaaatttaaaaaaataaaaaggtcagTGTGGGTTAACCGCTTTCCcctgttttacaaccctgggcccaatgttactgttgatgagcagcttatgccatttaggagccgctgccccttcaggcagtacatacAGTCTAAACCCGAaaaatatggaatcaagatctgTGATGCGGCTTCATCATATGCGTGAAACTTGCAAATGTACATGGGGAAGCCAGATGGAGGCGCCCCTGAAAAGAACCATGGGATGCGGGTTGTCCTGGACGTGGCCACAACATCACCTGCAATAACTTTTTTACTTCGAACAAGCTGGGAcaggagctcctcaagaggaagttgacgatggtaggaacagtatggaaaaaacaagccagagctcccacctcagctgttgaataCACAGAACAGGTCTATTAATTCATCTAAGTTGGGCAAGGCATTGGTAAGGCCTCAAATCCAGAGGAGGCAACATATCCCATGGACCCCAAACATTgtgaggaggattcaggaggaaGATGCTGCTACACCATCCGCCCGACCCACAAATCCAACAACTCCAATATTGGAAAATGCAGCCGGTAGCAACAAGAAGAACCGCAGCGATGTGTGGAgacccaagaaggacaggaagacacagagcACATACATCAAAGTGCAAGAAATATATttgcaacacacacagtaaaactttctccctcatgtggtgtgTAGACCAGCCTTAATTTGTGTTTCATGGGGCTCATTTACTGTATAATttctataaaatactgtatgtaaaatgtctttccaatttgttcagttcaaagcaTTAAACATCAATAGTGATGAAAAccttg

Function

NR:

description
PREDICTED: piggyBac transposable element-derived protein 4-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002475052.2 True 932 mRNA 0.44 2 66637153 66638202

Neighbor

gene id symbol gene type direction distance location
LOC110494333 LOC106560895 coding downstream 3335 66629559 ~ 66633818 (-)
LOC110494316 NA coding downstream 50570 66582120 ~ 66586583 (-)
LOC110494195 LOC106560909 coding downstream 282615 66343630 ~ 66354538 (-)
LOC110494122 LOC106560915 coding downstream 337516 66277821 ~ 66299637 (-)
si:dkeyp-50b9.1 LOC106560918 coding downstream 413803 66210436 ~ 66223350 (-)
LOC110494342 LOC106560894 coding upstream 2860 66641062 ~ 66643589 (-)
LOC110494363 klhl36 coding upstream 29672 66667874 ~ 66678769 (-)
LOC110494415 LOC106560887 coding upstream 96979 66735181 ~ 66774321 (-)
LOC110494421 LOC106560888 coding upstream 137032 66775234 ~ 66790323 (-)
ces3 LOC100380756 coding upstream 216104 66854306 ~ 66859005 (-)
G174447 NA non-coding downstream 15149 66621575 ~ 66622004 (-)
G174437 NA non-coding downstream 83241 66553555 ~ 66553912 (-)
G174436 NA non-coding downstream 83767 66553058 ~ 66553386 (-)
G174435 NA non-coding downstream 84797 66551894 ~ 66552356 (-)
G174434 NA non-coding downstream 89835 66546120 ~ 66547318 (-)
G174475 NA non-coding upstream 14329 66652531 ~ 66654391 (-)
G174508 NA non-coding upstream 57091 66695293 ~ 66695679 (-)
G174470 NA non-coding upstream 95035 66733237 ~ 66735127 (-)
G174580 NA non-coding upstream 213299 66851501 ~ 66851815 (-)
G174584 NA non-coding upstream 225499 66863701 ~ 66863937 (-)
G173696 LOC106560906 other downstream 246387 66375226 ~ 66390766 (-)
G173675 NA other downstream 298767 66335412 ~ 66338386 (-)
G173431 NA other downstream 714924 65921850 ~ 65922229 (-)
G173370 LOC106560927 other downstream 798079 65833341 ~ 65839074 (-)
G174505 NA other upstream 54206 66692408 ~ 66692850 (-)
G177487 NA other upstream 2952933 69591135 ~ 69591722 (-)
LOC110494902 LOC106560839 other upstream 3055407 69648833 ~ 69767366 (-)
LOC110501848 NA other upstream 3922320 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 4130956 70769140 ~ 70773282 (-)

Expression


Co-expression Network