XLOC_020676



Basic Information


Item Value
gene id XLOC_020676
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 739300 ~ 760886 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042237
TTCAGCTGCAGGGGGGCTTGTCGGCGTCTGATTGGCTGACGGTCGTATCCTGGCAGATCTCAGGACAGTAGAAAGTATTGACGGGGAAGCAtgggatcggcataggaccgcaagGCGGGAAGCGAACTCGAGTCGCCGAGAGCACCGCAGTGCACatgtcgacacactaaccactacaccactggccgTAAGGAATTTTAAAATGCGTTTTTCGCTCAAGttcaaaaaatactaatttttaaACTTGCAATGTCAAAAAAACATGCTGTGAATAATCTAGTGACGCGATTCTTCATGTCTGGCGTGGACCTAGCGTAAATGTTGGACTGTGTCATCGGCTGTGCTACTATGGAGGAGCGGAGCTAAAGATTTCTTTTAGGGCGTTTGCTCATTTCAGCCCTCTGATTGGTGGCCTTTCggcacagcatcatgggtaatgtagttcttCAGCACAAATTCAGCTGTTTGGGGTAGTCTACACACATACTGGTATGAGTTTTTCTcttttatgtaataaacaaattgtGTTCACagtagtgttgtcatgatactggaattcggtaccaatcgatacaaaaat

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042237 True 580 lncRNA 0.46 2 739300 760886

Neighbor


gene id symbol gene type direction distance location
XLOC_020675 NA coding downstream 4056 733244 ~ 735244 (-)
XLOC_020674 arl8a coding downstream 20685 710759 ~ 718615 (-)
XLOC_020673 NA coding downstream 34393 700213 ~ 704907 (-)
XLOC_020672 NA coding downstream 41796 659917 ~ 697504 (-)
XLOC_020671 apobec2a coding downstream 87581 641342 ~ 651719 (-)
XLOC_020677 rbbp5 coding upstream 9115 770001 ~ 784110 (-)
XLOC_020678 TMEM263 coding upstream 51962 812848 ~ 817479 (-)
XLOC_020679 cry4 coding upstream 58770 819656 ~ 834106 (-)
XLOC_020680 dram2b coding upstream 95983 856869 ~ 866196 (-)
XLOC_020681 cept1b coding upstream 105795 866681 ~ 881725 (-)
XLOC_020664 NA non-coding downstream 343400 392619 ~ 395900 (-)
XLOC_020657 NA non-coding downstream 423920 313710 ~ 315380 (-)
XLOC_020684 NA non-coding upstream 257459 1018345 ~ 1023531 (-)
XLOC_020686 NA non-coding upstream 395544 1156430 ~ 1168291 (-)
XLOC_020687 NA non-coding upstream 421198 1182084 ~ 1182479 (-)
XLOC_020689 CU570769.4 non-coding upstream 469020 1229906 ~ 1230022 (-)
XLOC_020690 NA non-coding upstream 500064 1260950 ~ 1269440 (-)

Expression



Co-expression Network