il34 (il-34)


Basic Information

Item Value
gene id il34
gene name il-34
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 68980410 ~ 69003899 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021617980.2
CAAGGTGGAGCTGGAGACGACCATATGGACATTGCGCAATTGATCAATATTCTCTCGTTTTGGAGTTCTGGGCCAAAGAAAGTGAGGCTTCAGGGATTTTCCCAAATTCGCGTTCGCCTAAAACGGGGGTTTTACTCTGGGTGTTGCTGCGCGCAGGTCATCTATTAAAGATGACATTGTTTCAATATCACTGACCAGTCACGCACGCGTGGTTTCCCAGCCTTGTAAGTAAGTCGTTTGTGTGAACCATGTGTGCTTTTGGTCgctgctgctgatggtcattctgAAGATCACAGAGTGTTGAAGTTGCGAGTTTATGTGGAGTTACTGCTGGGATTGTGCAGGCTAACAAGGAGCGAGAAGGACCTTGTGGTGCTCTGGAAAAGTGTGTGATCTGAGTCGGAGGCCTCCAGCGTGTTTAAACGGGCATAAATTGGAGTATGGTCCGGTCAACAGCCTGGCTCCTGGGAGCTCTATTGGGTTTGATATGTGTACTACCTCTTGTTTTGATGACACCCAGAACTGCCCAGTGCACGTCTTTGAAGACATTGGAAAACAAACTCATAGGCAGAAGACGTAACATGAAACACAATTTACCCATTAATTACACCATCAGAGTTCACTATGAGGAGGTCTTCAAACTCAGCAATATCAGCAAGCTGAGGGCGAGGGTGGAGGATCTGGAAGACGGGGACCTGCAGGATGTGTGGCTGTTGGTCAACCGGGAGGTGTTGAAGAGGATTCTGAGGGTCTTGCCAGTGAGACACCCCTCCTACAAGTACACCACCGACCTGGAGGATCTCTTCAGGAAGGTCCAGCAGGTGTTCCCACCACAGACTGATGAGAGAGAGCCACCAGAGCGAATAGAGGAGATCTACAAAAGGGTTAAGGAGATTGACTCAAAAGGCTGGAGGTTCGTGACCCCCAAATCTCTGTTGGATAACTGCTATCGGACAATGCACTGTCTCTTCAAAGACTGCTTTTCCAGtgaagacagagagcaagacTATTGTGGCTTACCTCACTGGCGGAAGGGCAGAAAGAGACTACAGTAAACCTGAGAAGGGCGCTATTGTTTTCATAtgtatatttataatatattgTCTACTGATGTTTATGTTCTGTGTTTTGATTGCGGGTTCTAGATGTGTTTAGACAGTTGTATGGTATAGGGCAGGTGACTATGCTCAAGCAGAGCGCGATATAGCATTTCTATTttaattattttatatttttttgcaatCAGGGAACACTTATGGCTGACATAGGTATTAGCAACCGTTGCCCATAAAAGTAAGAACACAAACATAGCCAGCTACTCTCATCTCTGACTGTTTGTCTTTATGAATATTATAGTAAATGTGtttgtttaaaaatgttttttctctgttctgTTTTTTATCAATTGCTTTAAGGTGTTTTGCTGACTTGCAGGCATAGTCAGTGAATTCCAGCCACTCATTTGTTTGGCATTATGCACATCGATGCTGAAATAAAGATATTATTTCTGAAAATCTATTCCAGGTTCAACGAGTTAATTTCTGCAGTATGATTGCTTGTGGTCAGATTACATCAGATGTTTATGTAAACGAGattgtttacatgcacactaataattggatattaaactgattatggcagtagaCAGATTACGCAATAATCATGTCACAccttactctgtttatcttaatcGGTTTGAGGTCAAAATGGAAAAACTTAAAACggctggttttctgagcaatctttcaaattattaggacatgtaaacaccttaatcGGTGTTCCAGTAGTGTATTTGATCCGCGCATGTGCTAGCACCAGCCGAGCGAGTCTCCTTTAGCGATGGCTAAAGTTAGCTGTAGTTTTCTAATGGCTGTTTAAATAAAACTGAAGCATGGATTCGTTTTTCCTGACCCATAGACTACTTTCCGGGTGAGGAAATatctaacatcaagttgtaaaatagCGAACTACTCCTTTAAGGTGTCTACCGTTTAGAATCCttagttcactgcagctagcgactggaacaagctgcaacaaaacACTAACTGGACCTTttcatctccatctcttcattcaaagattcAAATCATGGACagtttactgacagttgtggctgcttcgcgtggtATATTGTCTCTATCTTGCCCATTGTGCTGTTGTCTTTGTACCATgatttgtgctgctaccatgctgtgttttcatgtgttgctgttatgttgtcttaggtctctatgtagtgttgtggtgtctctcttgtcgtgatgtgtgttttgatatttttattaaatgtttgatttttaATCCGAGCCCCCGTCCCAGCAGGGGggcttttggtaggccgtcactgtaaataaaaatgtgttcttaactgacttgcctagttaaataaaggtaaactatATATTTTA
>XM_021617991.2
CAAGGTGGAGCTGGAGACGACCATATGGACATTGCGCAATTGATCAATATTCTCTCGTTTTGGAGTTCTGGGCCAAAGAAAGTGAGGCTTCAGGGATTTTCCCAAATTCGCGTTCGCCTAAAACGGGGGTTTTACTCTGGGTGTTGCTGCGCGCAGGTCATCTATTAAAGATGACATTGTTTCAATATCACTGACCAGTCACGCACGCGTGGTTTCCCAGCCTTGCTAACAAGGAGCGAGAAGGACCTTGTGGTGCTCTGGAAAAGTGTGTGATCTGAGTCGGAGGCCTCCAGCGTGTTTAAACGGGCATAAATTGGAGTATGGTCCGGTCAACAGCCTGGCTCCTGGGAGCTCTATTGGGTTTGATATGTGTACTACCTCTTGTTTTGATGACACCCAGAACTGCCCAGTGCACGTCTTTGAAGACATTGGAAAACAAACTCATAGGCAGAAGACGTAACATGAAACACAATTTACCCATTAATTACACCATCAGAGTTCACTATGAGGAGGTCTTCAAACTCAGCAATATCAGCAAGCTGAGGGCGAGGGTGGAGGATCTGGAAGACGGGGACCTGCAGGATGTGTGGCTGTTGGTCAACCGGGAGGTGTTGAAGAGGATTCTGAGGGTCTTGCCAGTGAGACACCCCTCCTACAAGTACACCACCGACCTGGAGGATCTCTTCAGGAAGGTCCAGCAGGTGTTCCCACCACAGACTGATGAGAGAGAGCCACCAGAGCGAATAGAGGAGATCTACAAAAGGGTTAAGGAGATTGACTCAAAAGGCTGGAGGTTCGTGACCCCCAAATCTCTGTTGGATAACTGCTATCGGACAATGCACTGTCTCTTCAAAGACTGCTTTTCCAGtgaagacagagagcaagacTATTGTGGCTTACCTCACTGGCGGAAGGGCAGAAAGAGACTACAGTAAACCTGAGAAGGGCGCTATTGTTTTCATAtgtatatttataatatattgTCTACTGATGTTTATGTTCTGTGTTTTGATTGCGGGTTCTAGATGTGTTTAGACAGTTGTATGGTATAGGGCAGGTGACTATGCTCAAGCAGAGCGCGATATAGCATTTCTATTttaattattttatatttttttgcaatCAGGGAACACTTATGGCTGACATAGGTATTAGCAACCGTTGCCCATAAAAGTAAGAACACAAACATAGCCAGCTACTCTCATCTCTGACTGTTTGTCTTTATGAATATTATAGTAAATGTGtttgtttaaaaatgttttttctctgttctgTTTTTTATCAATTGCTTTAAGGTGTTTTGCTGACTTGCAGGCATAGTCAGTGAATTCCAGCCACTCATTTGTTTGGCATTATGCACATCGATGCTGAAATAAAGATATTATTTCTGAAAATCTATTCCAGGTTCAACGAGTTAATTTCTGCAGTATGATTGCTTGTGGTCAGATTACATCAGATGTTTATGTAAACGAGattgtttacatgcacactaataattggatattaaactgattatggcagtagaCAGATTACGCAATAATCATGTCACAccttactctgtttatcttaatcGGTTTGAGGTCAAAATGGAAAAACTTAAAACggctggttttctgagcaatctttcaaattattaggacatgtaaacaccttaatcGGTGTTCCAGTAGTGTATTTGATCCGCGCATGTGCTAGCACCAGCCGAGCGAGTCTCCTTTAGCGATGGCTAAAGTTAGCTGTAGTTTTCTAATGGCTGTTTAAATAAAACTGAAGCATGGATTCGTTTTTCCTGACCCATAGACTACTTTCCGGGTGAGGAAATatctaacatcaagttgtaaaatagCGAACTACTCCTTTAAGGTGTCTACCGTTTAGAATCCttagttcactgcagctagcgactggaacaagctgcaacaaaacACTAACTGGACCTTttcatctccatctcttcattcaaagattcAAATCATGGACagtttactgacagttgtggctgcttcgcgtggtATATTGTCTCTATCTTGCCCATTGTGCTGTTGTCTTTGTACCATgatttgtgctgctaccatgctgtgttttcatgtgttgctgttatgttgtcttaggtctctatgtagtgttgtggtgtctctcttgtcgtgatgtgtgttttgatatttttattaaatgtttgatttttaATCCGAGCCCCCGTCCCAGCAGGGGggcttttggtaggccgtcactgtaaataaaaatgtgttcttaactgacttgcctagttaaataaaggtaaactatATATTTTA
>NM_001257301.1
GCTAACAAGGAGCGAGAAGGACCTTGTGGTGCTCTGGAAAAGTGTGTGATCTGAGTCGGAGGCCTCCAGCGTGTTTAAACGGGCATAAATTGGAGTATGGTCCGGTCAACAGCCTGGCTCCTGGGAGCTCTATTGGGTTTGATATGTGTACTACCTCTTGTTTTGATGACACCCAGAACTGCCCAGTGCACGTCTTTGAAGACATTGGAAAACAAACTCATAGGCAGAAGACGTAACATGAAACACAATTTACCCATTAATTACACCATCAGAGTTCACTATGAGGAGGTCTTCAAACTCAGCAATATCAGCAAGCTGAGGGCGAGGGTGGAGGATCTGGAAGACGGGGACCTGCAGGATGTGTGGCTGTTGGTCAACCGGGAGGTGTTGAAGAGGATTCTGAGGGTCTTGCCAGTGAGACACCCCTCCTACAAGTACACCACCGACCTGGAGGATCTCTTCAGGAAGGTCCAGCAGGTGTTCCCACCACAGACTGATGAGAGAGAGCCACCAGAGCGAATAGAGGAGATCTACAAAAGGGTTAAGGAGATTGACTCAAAAGGCTGGAGGTTCGTGACCCCCAAATCTCTGTTGGATAACTGCTATCGGACAATGCACTGTCTCTTCAAAGACTGCTTTTCCAGtgaagacagagagcaagacTATTGTGGCTTACCTCACTGGCGGAAGGGCAGAAAGAGACTACAGTAAACCTGAGAAGGGCGCTATTGTTTTCATAtgtatatttataatatattgTCTACTGATGTTTATGTTCTGTGTTTTGATTGCGGGTTCTAGATGTGTTTAGACAGTTGTATGGTATAGGGCAGGTGACTATGCTCAAGCAGAGCGCGATATAGCATTTCTATTttaattattttatatttttttgcaatCAGGGAACACTTATGGCTGACATAGGTATTAGCAACCGTTGCCC

Function

NR:

description
interleukin-34 precursor

GO:

id name namespace
GO:0008284 positive regulation of cell population proliferation biological_process
GO:0001934 positive regulation of protein phosphorylation biological_process
GO:0005615 extracellular space cellular_component
GO:0005157 macrophage colony-stimulating factor receptor binding molecular_function

KEGG:

id description
K22633 IL34; interleukin 34

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021617980.2 False 2414 mRNA 0.42 7 68980410 69003899
XM_021617991.2 False 2294 mRNA 0.42 7 68980410 69003899
NM_001257301.1 True 943 mRNA 0.46 6 68981537 68995045

Neighbor

gene id symbol gene type direction distance location
lonp2 lonp2 coding downstream 2712 68951337 ~ 68977698 (-)
cdh13 LOC106560870 coding downstream 787517 67666186 ~ 68192893 (-)
zgc:173742 LOC106560872 coding downstream 1456619 67491429 ~ 67523791 (-)
si:dkey-246g23.2 LOC106560875 coding downstream 1494384 67403141 ~ 67486026 (-)
LOC110501813 LOC106560876 coding downstream 1625688 67349284 ~ 67354722 (-)
sf3b3 sf3b3 coding upstream 5951 69009850 ~ 69059398 (-)
aars1 aars coding upstream 92843 69096742 ~ 69111871 (-)
LOC110494649 LOC106560856 coding upstream 109881 69112267 ~ 69128035 (-)
LOC110494669 arl2bp coding upstream 134717 69138616 ~ 69140982 (-)
rspry1 LOC106560854 coding upstream 137249 69141148 ~ 69166663 (-)
G177154 NA non-coding downstream 953 68978979 ~ 68979457 (-)
G176712 NA non-coding downstream 65127 68915008 ~ 68915283 (-)
G176688 NA non-coding downstream 86720 68885939 ~ 68893690 (-)
G176668 NA non-coding downstream 118959 68861177 ~ 68861451 (-)
G176664 NA non-coding downstream 123671 68856535 ~ 68856739 (-)
G177192 NA non-coding upstream 45121 69049020 ~ 69106218 (-)
G177244 NA non-coding upstream 112968 69116867 ~ 69117163 (-)
G177272 NA non-coding upstream 191642 69195541 ~ 69195986 (-)
G177207 NA non-coding upstream 306612 69310511 ~ 69311709 (-)
G174505 NA other downstream 2287560 66692408 ~ 66692850 (-)
G173696 LOC106560906 other downstream 2589644 66375226 ~ 66390766 (-)
G173675 NA other downstream 2642024 66335412 ~ 66338386 (-)
LOC110494122 LOC106560915 other downstream 2682096 66277821 ~ 66299637 (-)
G173431 NA other downstream 3058181 65921850 ~ 65922229 (-)
G177487 NA other upstream 587236 69591135 ~ 69591722 (-)
LOC110494902 LOC106560839 other upstream 689710 69648833 ~ 69767366 (-)
LOC110501848 NA other upstream 1556623 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 1765259 70769140 ~ 70773282 (-)
G179215 NA other upstream 1901473 70905372 ~ 70906254 (-)

Expression


Co-expression Network