Gene
RNA
| Item | Value |
|---|---|
| gene id | trnal-cag |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 69134783 ~ 69134865 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnal-cag | True | 83 | mRNA | 0.60 | 1 | 69134783 | 69134865 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| exosc6 | exosc6 | coding | upstream | 20978 | 69112063 ~ 69113805 (+) |
| st3gal2 | st3gal2 | coding | upstream | 41708 | 69069631 ~ 69093075 (+) |
| LOC118941448 | LOC107672167 | coding | upstream | 166226 | 68963784 ~ 68968557 (+) |
| siah1 | siah1 | coding | upstream | 187677 | 68920701 ~ 68947106 (+) |
| LOC110494586 | n4bp1 | coding | upstream | 225311 | 68883169 ~ 68909472 (+) |
| psme3ip1 | LOC106560853 | coding | downstream | 31930 | 69166795 ~ 69176697 (+) |
| LOC110494820 | NA | coding | downstream | 180703 | 69315568 ~ 69325990 (+) |
| b3gnt9 | LOC106560847 | coding | downstream | 191242 | 69326107 ~ 69332525 (+) |
| LOC110494892 | LOC106560841 | coding | downstream | 463732 | 69598438 ~ 69608770 (+) |
| LOC110494936 | LOC106560837 | coding | downstream | 692645 | 69827510 ~ 69834723 (+) |
| G176863 | LOC106560856 | non-coding | upstream | 7949 | 69126180 ~ 69126834 (+) |
| G176861 | NA | non-coding | upstream | 9118 | 69124935 ~ 69125665 (+) |
| G176859 | LOC106560856 | non-coding | upstream | 12053 | 69121532 ~ 69122730 (+) |
| G176858 | LOC106560856 | non-coding | upstream | 13444 | 69121044 ~ 69121339 (+) |
| G176857 | NA | non-coding | upstream | 13829 | 69120668 ~ 69120954 (+) |
| G176888 | NA | non-coding | downstream | 30143 | 69165008 ~ 69165317 (+) |
| G176889 | NA | non-coding | downstream | 30830 | 69165695 ~ 69165960 (+) |
| G176970 | NA | non-coding | downstream | 175664 | 69310529 ~ 69311710 (+) |
| G176987 | NA | non-coding | downstream | 210339 | 69345204 ~ 69346102 (+) |
| G176725 | lonp2 | other | upstream | 176897 | 68956263 ~ 68957886 (+) |
| G176612 | LOC100846954 | other | upstream | 273415 | 68860838 ~ 68861368 (+) |
| hsbp1b | LOC106561110 | other | upstream | 1646582 | 67486128 ~ 67488205 (+) |
| LOC110494472 | utp4 | other | upstream | 1894887 | 67232278 ~ 67239902 (+) |
| LOC110494451 | zfpm1 | other | upstream | 2162328 | 66900017 ~ 66995521 (+) |
| G177067 | NA | other | downstream | 321693 | 69456558 ~ 69457433 (+) |
| G177812 | NA | other | downstream | 972421 | 70107286 ~ 70113440 (+) |
| igf1ra | igf1r | other | downstream | 1660545 | 70794530 ~ 70905277 (+) |
| LOC110495604 | LOC106573778 | other | downstream | 2924852 | 72059717 ~ 72065199 (+) |
| LOC110533853 | LOC106561194 | other | downstream | 3118573 | 72250884 ~ 72253809 (+) |
