Item | Value |
---|---|
gene id | LOC110494832 |
gene name | LOC106560845 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 69331023 ~ 69342066 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: UPF0183 protein C16orf70 homolog isoform X3 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021570168.2 | False | 5620 | mRNA | 0.43 | 16 | 69331023 | 69342065 |
XM_036954461.1 | False | 5587 | mRNA | 0.43 | 16 | 69331023 | 69342065 |
XM_036954464.1 | True | 5570 | mRNA | 0.43 | 16 | 69331023 | 69342066 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
nup93 | nup93 | coding | downstream | 22119 | 69276978 ~ 69308904 (-) |
slc12a3 | LOC106560848 | coding | downstream | 56476 | 69266405 ~ 69274547 (-) |
herpud1 | herp1 | coding | downstream | 65418 | 69251287 ~ 69265605 (-) |
LOC110494745 | LOC106560849 | coding | downstream | 80741 | 69235656 ~ 69250282 (-) |
nlrc5 | LOC106560850 | coding | downstream | 101468 | 69207423 ~ 69229555 (-) |
LOC110494854 | LOC106560844 | coding | upstream | 11596 | 69353662 ~ 69389693 (-) |
gnao1a | LOC106560843 | coding | upstream | 69703 | 69411769 ~ 69549683 (-) |
LOC110492400 | NA | coding | upstream | 236103 | 69578169 ~ 69584892 (-) |
LOC110494902 | LOC106560839 | coding | upstream | 306767 | 69648833 ~ 69767366 (-) |
LOC110494926 | LOC106560838 | coding | upstream | 433861 | 69775927 ~ 69827479 (-) |
G177323 | NA | non-coding | downstream | 4195 | 69326308 ~ 69326828 (-) |
G177322 | NA | non-coding | downstream | 4763 | 69325550 ~ 69326260 (-) |
G177315 | NA | non-coding | downstream | 11079 | 69319561 ~ 69319944 (-) |
G177207 | NA | non-coding | downstream | 19314 | 69310511 ~ 69311709 (-) |
G177272 | NA | non-coding | downstream | 135037 | 69195541 ~ 69195986 (-) |
G177333 | NA | non-coding | upstream | 23046 | 69365112 ~ 69365852 (-) |
G177353 | NA | non-coding | upstream | 97781 | 69439847 ~ 69458295 (-) |
G177428 | NA | non-coding | upstream | 200309 | 69542375 ~ 69542883 (-) |
G177486 | NA | non-coding | upstream | 248601 | 69590667 ~ 69591051 (-) |
G177834 | NA | non-coding | upstream | 287787 | 69629853 ~ 69638176 (-) |
G174505 | NA | other | downstream | 2638173 | 66692408 ~ 66692850 (-) |
G173696 | LOC106560906 | other | downstream | 2940257 | 66375226 ~ 66390766 (-) |
G173675 | NA | other | downstream | 2992637 | 66335412 ~ 66338386 (-) |
LOC110494122 | LOC106560915 | other | downstream | 3032709 | 66277821 ~ 66299637 (-) |
G173431 | NA | other | downstream | 3408794 | 65921850 ~ 65922229 (-) |
G177487 | NA | other | upstream | 249069 | 69591135 ~ 69591722 (-) |
LOC110501848 | NA | other | upstream | 1218456 | 70552263 ~ 70642587 (-) |
fam169b | fam169b | other | upstream | 1427092 | 70769140 ~ 70773282 (-) |
G179215 | NA | other | upstream | 1563306 | 70905372 ~ 70906254 (-) |