gnao1a (LOC106560843)


Basic Information

Item Value
gene id gnao1a
gene name LOC106560843
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 69411769 ~ 69549683 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036954480.1
CACCAGGACCGTGGCTCGAGCATGTCTCCTGCGCTGATTGGTCCTGACGTCAGCAAGATTGTCTGAGTGCGGAGCCAAGCGCGCTCCCCTCTACATTGAGCAAGCTAAACGATGCGAGCGCTCGCATCCGTCGCCGCCGCCCAGTAGAGTTTCCCAGCCCGCGGACCAAGCACAACAACACCGAAAGAAATAGACCGTGTGAGGGCAATATACGAAGACCAGTGCTTTTTTCAAACAAGTGTCAAACGTTATCGTTTGggatttttttaaatgctttaaCTAGTCGCCgacagagcgcgagagagtgGAACGAGAGCGAGTCAGCCAGCCTAGAGAGGGATAAGGAAGAAAGAGGGAAAGTAATTGCTGGTATATTTTGGTCCTCGCCAACCGTTACTTTGGATATCAAGAAGATCAGAGGTTGTGTAGTCATGGGATGTACACTGAGCGCCGAGGAGAGAGCGGCTTTGGACAGGAGCAAGGCTATCGAGAAAAACCTAAAAGAAGATGGAGTCACTGCCGCGAAAGACGTAAAACTACTCCTGCTTGGGGCTGGGGAGTCAGGAAAAAGTACCATCGTGAAACAGATGAAGATTATCCACGAGGATGGCTTCTCTGGAGATGATGTGAAGCAGTACAAGCCTGTGGTCTACAGCAACACAATCCAGTCTCTGGCTGCCATCGTCCGTGCCATGGACACCCTTGGCCTGGAGTACGGAGACAAGGAGAGAAAAgcTGATGCTAAGATGGTGTGTGACGTGGTGAGTCGTATGGAGGACACTGAGCCCTACTCTCCTGAGCTCCTGGGGGCTATGATCCGCCTGTGGTCTGACTCCGGCATCCAGGAGTGCTTCAGCCGCGCCCGAGAATACCAGCTCAATGACTCTGCCCAATACTACCTAGACAGTTTAGACCGGATCGGTGCACCTGACTACCAGCCCACAGAGCAGGACATCCTCAGAACCCGAGTCAAGACCACTGGCATTGTAGAAACTCACTTCGTCTTCAAGAACCTGCACTTCAGGCTGTTTGATGTGGGAGGTCAGAGGTCGGAGAGGAAGAAATGGATACACTGCTTTGAGGACGTGACAGCCATTATCTTCTGTGTGGCACTGAGTGGGTACGACCAGGTGCTGCATGAAGACGAAACCACGAATCGCATGCACGAGTCTCTTATGCTGTTCGATTCCATCTGTAACAACAAATTCTTCATTGACACTTCCATCATTCTCTTCCTCAACAAGAAAGATCTGTTTGCCGAAAAGATCAAGAAATCTGCCTTGAGTATCTGTTTCCCTGAGTATACCGGTTCTAACACCTATGACGATGCAGCTGCCTACATCCAAGCACAATTTGAGAGCAAGAACCGCTCGCCTAATAAGGAGATCTACTGTCACCTGACGTGTGCCACGGATACAGGGAACATCCAGGTGGTGTTTGACGCTGTTACTGACATCATCATCGCCAACAACCTGCGAGGGTGTGGTTTGTACTAAGCCCTGATCCTCTCACCTCTGGAAATTATTCTAATTGAAAATGCAACTTGGTAAATAATGAAATTTTAAAAATAGGCATACGTATATctaaatgtatatacagtaccagtcaaaagtttggacacacctactcattcaagggtttttctttatttttactattttctagaattgtagaataatattgaagacatcgaactatgaaataacacacatggaatcatgtagaaaccaaaaaagtgttaaacaaatcgaaatagattttagattattcaaagtagccaccctttgccttgatgacagctttgcacactcttggccttctctcaactagtacaaaaaaagaaaaacccttgaatgagtaggtgtgtccaaacgtttgactggtactgtgtataatGGGGCCATACTTGCAAACATTAGAAACAgtttgcctttaaactgtttctCTGTCTCAAAATGTGCATCAGCCAATTAATATCGTTGATTAGTATCATTGTCCCATCAAATAGCCTGGCACATTTTAGCCCTATCCTAACCTCACCAGCTGTCGGGGATTATTCTGTATAACAAACTCCACAAAGACTTTTTATCCACCACGGCATTTCTTGAAATAGGTTAACCCTGGCCACCAGAGGGATATTTTAAACCTATTTGGTATGGTATGTTAGGCCTATGTACAACACTAATTCATCATGAAGTTGtttattttttcacattttatttcaccttcatttaaccaggtaggccagtgacaagttctcatttacaactgcgacctggccaaaatgaagcaaagcagtgcgacaaaaacaaca
>XM_036954495.1
CTGCCACCAGGACCGTGGCTCGAGCATGTCTCCTGCGCTGATTGGTCCTGACGTCAGCAAGATTGTCTGAGTGCGGAGCCAAGCGCGCTCCCCTCTACATTGAGCAAGCTAAACGATGCGAGCGCTCGCATCCGTCGCCGCCGCCCAGTAGAGTTTCCCAGCCCGCGGACCAAGCACAACAACACCGAAAGAAATAGACCGTGTGAGGGCAATATACGAAGACCAGTGCTTTTTTCAAACAAGTGTCAAACGTTATCGTTTGggatttttttaaatgctttaaCTAGTCGCCgacagagcgcgagagagtgGAACGAGAGCGAGTCAGCCAGCCTAGAGAGGGATAAGGAAGAAAGAGGGAAAGTAATTGCTGGTATATTTTGGTCCTCGCCAACCGTTACTTTGGATATCAAGAAGATCAGAGGTTGTGTAGTCATGGGATGTACACTGAGCGCCGAGGAGAGAGCGGCTTTGGACAGGAGCAAGGCTATCGAGAAAAACCTAAAAGAAGATGGAGTCACTGCCGCGAAAGACGTAAAACTACTCCTGCTTGGGGCTGGGGAGTCAGGAAAAAGTACCATCGTGAAACAGATGAAGATTATCCACGAGGATGGCTTCTCTGGAGATGATGTGAAGCAGTACAAGCCTGTGGTCTACAGCAACACAATCCAGTCTCTGGCTGCCATCGTCCGTGCCATGGACACCCTTGGCCTGGAGTACGGAGACAAGGAGAGAAAAgcTGATGCTAAGATGGTGTGTGACGTGGTGAGTCGTATGGAGGACACTGAGCCCTACTCTCCTGAGCTCCTGGGGGCTATGATCCGCCTGTGGTCTGACTCCGGCATCCAGGAGTGCTTCAGCCGCGCCCGAGAATACCAGCTCAATGACTCTGCCCAATACTACCTAGACAGTTTAGACCGGATCGGTGCACCTGACTACCAGCCCACAGAGCAGGACATCCTCAGAACCCGAGTCAAGACCACTGGCATTGTAGAAACTCACTTCGTCTTCAAGAACCTGCACTTCAGGCTGTTTGATGTGGGAGGTCAGAGGTCGGAGAGGAAGAAATGGATACACTGCTTTGAGGACGTGACAGCCATTATCTTCTGTGTGGCACTGAGTGGGTACGACCAGGTGCTGCATGAAGACGAAACCACGAACCGCATGCATGAGTCTATGAAGCTGTTCGACAGCATCTGTAACAACAAATGGTTCACAGACACCTCCATCATTCTATTTCTCAACAAGAAGGACATATTCGAGCAGAAAATTAAGAAATCTCCCCTTAGTATCTGCTTCCCGGAGTACACAGGTTCTAACACCTATGACGATGCAGCTGCCTACATCCAAGCACAATTTGAGAGCAAGAACCGCTCGCCTAATAAGGAGATCTACTGTCACCTGACGTGTGCCACGGATACAGGGAACATCCAGGTGGTGTTTGACGCTGTTACTGACATCATCATCGCCAACAACCTGCGAGGGTGTGGTTTGTACTAAGCCCTGATCCTCTCACCTCTGGAAATTATTCTAATTGAAAATGCAACTTGGTAAATAATGAAATTTTAAAAATAGGCATACGTATATctaaatgtatatacagtaccagtcaaaagtttggacacacctactcattcaagggtttttctttatttttactattttctagaattgtagaataatattgaagacatcgaactatgaaataacacacatgga
>XM_036954484.1
CTGCCACCAGGACCGTGGCTCGAGCATGTCTCCTGCGCTGATTGGTCCTGACGTCAGCAAGATTGTCTGAGTGCGGAGCCAAGCGCGCTCCCCTCTACATTGAGCAAGCTAAACGATGCGAGCGCTCGCATCCGTCGCCGCCGCCCAGTAGAGTTTCCCAGCCCGCGGACCAAGCACAACAACACCGAAAGAAATAGACCGTGTGAGGGCAATATACGAAGACCAGTGCTTTTTTCAAACAAGTGTCAAACGTTATCGTTTGggatttttttaaatgctttaaCTAGTCGCCgacagagcgcgagagagtgGAACGAGAGCGAGTCAGCCAGCCTAGAGAGGGATAAGGAAGAAAGAGGGAAAGTAATTGCTGGTATATTTTGGTCCTCGCCAACCGTTACTTTGGATATCAAGAAGATCAGAGGTTGTGTAGTCATGGGATGTACACTGAGCGCCGAGGAGAGAGCGGCTTTGGACAGGAGCAAGGCTATCGAGAAAAACCTAAAAGAAGATGGAGTCACTGCCGCGAAAGACGTAAAACTACTCCTGCTTGGGGCTGGGGAGTCAGGAAAAAGTACCATCGTGAAACAGATGAAGATTATCCACGAGGATGGCTTCTCTGGAGATGATGTGAAGCAGTACAAGCCTGTGGTCTACAGCAACACAATCCAGTCTCTGGCTGCCATCGTCCGTGCCATGGACACCCTTGGCCTGGAGTACGGAGACAAGGAGAGAAAAgcTGATGCTAAGATGGTGTGTGACGTGGTGAGTCGTATGGAGGACACTGAGCCCTACTCTCCTGAGCTCCTGGGGGCTATGATCCGCCTGTGGTCTGACTCCGGCATCCAGGAGTGCTTCAGCCGCGCCCGAGAATACCAGCTCAATGACTCTGCCCAATACTACCTAGACAGTTTAGACCGGATCGGTGCACCTGACTACCAGCCCACAGAGCAGGACATCCTCAGAACCCGAGTCAAGACCACTGGCATTGTAGAAACTCACTTCGTCTTCAAGAACCTGCACTTCAGGCTGTTTGATGTGGGAGGTCAGAGGTCGGAGAGGAAGAAATGGATACACTGCTTTGAGGACGTGACAGCCATTATCTTCTGTGTGGCACTGAGTGGGTACGACCAGGTGCTGCATGAAGACGAAACCACGAACCGCATGCATGAGTCTATGAAGCTGTTCGACAGCATCTGTAACAACAAATGGTTCACAGACACCTCCATCATTCTATTTCTCAACAAGAAGGACATATTCGAGCAGAAAATTAAGAAATCTCCCCTTAGTATCTGCTTCCCGGAGTACACAGGCACGGACACCTTCATGGAGGCGGTGGGCCACATACAGTCTCAGTACGAGAGCAGGAACAAGTCCCTCCAGAAGGAAGTGTATGCCCACATCACCTGTGCCACCGACACCAACAACATCCAGTTTGTGTTTGACGCTGTCACCGATGTCATCATTGCCAAAAACCTGCGTGGTTGTGGCCTGTATTAACCCAGAGGATAGACCCAGTGTGTCCCTGGATAGACCCTTCTCCTCCACTTTTCCCTCAGTCTTTTATGGTTTTAGATTAGTTTatatattaaaacattttaaatcagTTGTAGAAAGAGACAGCTGTATTTTAGGCCTCAGACTTTGCAAATCACAAGGAGAGATGAAGTCAGGAAAAAGAGAGGACTCTTGAATGGAACAATTAGTTTTAGTTTGATAAAGAATATACATTTTGACAATTTGATACAAAAGTCATTTTAGTGGTAGATTATTTCTGTATGTTTGGCAATATGCTGCATTGTGCAAGTGTTTTAGTAAAACAATGTTACACAACAGTAATAATTGCCTAACTGGAATTGGGTCACCACCATAAACAATAATATACAGTTTACAAGGAAAACTGCTCATCTTTACCAACAAAGTATCTCTTTTGCTTATTGAGTAGTAGTCATCTGATATGAGAGGAATTTGTGCCTGGACAGTTTTGTGAAACACATTGAAGTGGGAATTGGAGTTGAAGAGTTGGAGATGTGTTTGTGGCTAGTGGAAGATGTTACCGTGTAAATAATGTGAATTTCAGGATTCTTTTGTTGAAATATTATTTGTTCCGCTTATATGTCGTGTGTGTTCTAAGATTTTTGTATTGGATGGCTTTTTTGGGCTATTGTCTAATATTTGTACGATTCAATGATTCGGTGTGAAATGTGTAAGATTTGAAAGTACAGCCAAAGATGTTTTGAGCCCTTTACACTGCACTGGTCTCACTGAAGGGTACATTTACCCAAACAGTGTATTTGCGTAACTAATTGTAACCCATTTATAATGGAAATTGGTAGCAGTGGTAATCTTCATAAAAGTCACTGCCTGTTGAGTTAGAGCTGTAGAAATATTCACCCGTCATATTTAGTCCAGATTTTCTTGTTGAGGTTTAGGTGCCTCAGCAGTCTCAATCAAGCACTGGGAGTTGTTTGACTTACATTGATGGTGATTGGCCTGGCTATGTCAGTAACTCATTTGCCTTACCGGTGCCAATGCTATATTCTTAATGGGAGCGCCAATCGGATAAGCAGGGggtgtttaatgtgtgtgtgtgtgaggtcaaATAAGTTAGTATCtgtttgtagtatactgtaagaGAGAGCGTTTGTAGGATGAGGTTATCCAGGAAACAGCTGTTCCGTTCCTCATTACACAGAACCTCAGGAAGGACACCAAATGTCACAACACCCTCCCTGTCATTTGCCAGATAATGCCAAACCACTCTAAGAAGAGGAAAAACCTGTTGGTTTCTTGCCAAATAAAACCCTGCTCCCTGAGGTTTGATTCCGTCCTCCTCTTTTAGCTGTGCTCTTGTCATGGCTGTAGGAAGCTCTCTTCGAAATCACTAATTTGTCACACCCATGCAGGTGCTGGGTGAGTGGGGGTAGGGCAGATGTTTCCATGACGATCGTTCTCAGCACCACGCCTGCCTTAGCTGGCAGGTGCAGCCTCTTGTGTGTCAGGTGACTCTGACAGCCACTGCGTTGATTCTCTGGGCTCTGTGAAAGATTTGTTGACTGTACTGCAGTACACTACAACACCATTGCAGTAAGTTACTGTGTTGCTTCGGGTAGGTGCGCTGCAGGAAGCAAAGGCTGTGCCAGCTCCACAACAGGACATGGTCTCTGAGTTCTCATGGGCAGAAGAAATCTCATTCTGTGCCAAATCTGTTGAGACGGTGTTGGTGTGCCACATTTTATGATGAATAAAAAGCTTGTCCGTGCTGCGGTGTCGGGAGGCAGAGTCACAGCTGGAGTTTTCTATACCAGAGGCTAAACTAAGATGGAAGCCTTCAGAAGTCTAgcagggcatgtgtgtgtgtcccagagcACCCAACCAGATGGTCTCTCTGCTCATTGTATAGCTTGGCCTTACATCTGACTGATGGCCTATAAAGCCTGTGTCCTTGGTCCAGGGAATGAAGGGTAATAAGATCAGGGAACGGCAGGCAGAGAGAACGCTGGTAATAGAGTTTATGTGCACAGCAGTGAGGCTGATGGATAATGGAGTCTTAGGGCTAAGGTAAAGAGACAGATTGGTAAGTGTATCTGCTGGAGAGAAACTATGGGAGGTACAATATGTGGCCCTGAGTAAACTGGAtctccagtcagagagagagagagagagagagagagagagagagagagagagag

Function

NR:

description
guanine nucleotide-binding protein G(o) subunit alpha isoform X2

GO:

id name namespace
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0007212 dopamine receptor signaling pathway biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0003924 GTPase activity molecular_function
GO:0031821 G protein-coupled serotonin receptor binding molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function

KEGG:

id description
K04534 GNAO, G-ALPHA-O; guanine nucleotide-binding protein G(o) subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036954480.1 False 2314 mRNA 0.46 8 69411769 69549679
XM_036954495.1 False 1719 mRNA 0.48 8 69412368 69549683
XM_036954484.1 True 3692 mRNA 0.46 8 69416072 69549683

Neighbor

gene id symbol gene type direction distance location
LOC110494854 LOC106560844 coding downstream 22076 69353662 ~ 69389693 (-)
LOC110494832 LOC106560845 coding downstream 69703 69331023 ~ 69342066 (-)
nup93 nup93 coding downstream 102865 69276978 ~ 69308904 (-)
slc12a3 LOC106560848 coding downstream 137222 69266405 ~ 69274547 (-)
herpud1 herp1 coding downstream 146164 69251287 ~ 69265605 (-)
LOC110492400 NA coding upstream 28486 69578169 ~ 69584892 (-)
LOC110494902 LOC106560839 coding upstream 99150 69648833 ~ 69767366 (-)
LOC110494926 LOC106560838 coding upstream 226244 69775927 ~ 69827479 (-)
LOC110501833 LOC106560836 coding upstream 284949 69834632 ~ 69870691 (-)
LOC110494911 LOC106560835 coding upstream 321118 69870801 ~ 69892079 (-)
G177333 NA non-coding downstream 45917 69365112 ~ 69365852 (-)
G177323 NA non-coding downstream 84941 69326308 ~ 69326828 (-)
G177322 NA non-coding downstream 85509 69325550 ~ 69326260 (-)
G177315 NA non-coding downstream 91825 69319561 ~ 69319944 (-)
G177207 NA non-coding downstream 100060 69310511 ~ 69311709 (-)
G177486 NA non-coding upstream 40984 69590667 ~ 69591051 (-)
G177834 NA non-coding upstream 80170 69629853 ~ 69638176 (-)
G177835 NA non-coding upstream 81251 69630934 ~ 69638886 (-)
G177837 NA non-coding upstream 85142 69634825 ~ 69642865 (-)
G177838 NA non-coding upstream 85873 69635556 ~ 69643319 (-)
G174505 NA other downstream 2718919 66692408 ~ 66692850 (-)
G173696 LOC106560906 other downstream 3021003 66375226 ~ 66390766 (-)
G173675 NA other downstream 3073383 66335412 ~ 66338386 (-)
LOC110494122 LOC106560915 other downstream 3113455 66277821 ~ 66299637 (-)
G173431 NA other downstream 3489540 65921850 ~ 65922229 (-)
G177487 NA other upstream 41452 69591135 ~ 69591722 (-)
LOC110501848 NA other upstream 1010839 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 1219475 70769140 ~ 70773282 (-)
G179215 NA other upstream 1355689 70905372 ~ 70906254 (-)

Expression


Co-expression Network