Gene
RNA
| Item | Value |
|---|---|
| gene id | trnav-aac |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 69931529 ~ 69931601 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: interferon-induced protein 44-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnav-aac | True | 73 | mRNA | 0.56 | 1 | 69931529 | 69931601 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494911 | LOC106560835 | coding | downstream | 39450 | 69870801 ~ 69892079 (-) |
| LOC110501833 | LOC106560836 | coding | downstream | 60838 | 69834632 ~ 69870691 (-) |
| LOC110494926 | LOC106560838 | coding | downstream | 104050 | 69775927 ~ 69827479 (-) |
| LOC110494902 | LOC106560839 | coding | downstream | 164163 | 69648833 ~ 69767366 (-) |
| LOC110492400 | NA | coding | downstream | 346637 | 69578169 ~ 69584892 (-) |
| trnav-aac-2 | NA | coding | upstream | 4212 | 69935813 ~ 69935885 (-) |
| trnav-aac-3 | NA | coding | upstream | 8473 | 69940074 ~ 69940146 (-) |
| trnav-aac-4 | NA | coding | upstream | 12681 | 69944282 ~ 69944354 (-) |
| trnav-aac-5 | NA | coding | upstream | 16900 | 69948501 ~ 69948573 (-) |
| trnav-aac-6 | NA | coding | upstream | 21108 | 69952709 ~ 69952781 (-) |
| G177969 | NA | non-coding | downstream | 62732 | 69867581 ~ 69868797 (-) |
| G177925 | NA | non-coding | downstream | 68145 | 69831826 ~ 69863384 (-) |
| G177909 | NA | non-coding | downstream | 172544 | 69758619 ~ 69758985 (-) |
| G177901 | NA | non-coding | downstream | 183555 | 69747773 ~ 69747974 (-) |
| G177896 | NA | non-coding | downstream | 193179 | 69738105 ~ 69738350 (-) |
| G178056 | NA | non-coding | upstream | 145576 | 70077177 ~ 70077507 (-) |
| G178074 | NA | non-coding | upstream | 171541 | 70103142 ~ 70103632 (-) |
| G178075 | NA | non-coding | upstream | 173073 | 70104674 ~ 70104899 (-) |
| G178076 | NA | non-coding | upstream | 173753 | 70105354 ~ 70106158 (-) |
| G178077 | NA | non-coding | upstream | 174925 | 70106526 ~ 70106743 (-) |
| G177487 | NA | other | downstream | 339807 | 69591135 ~ 69591722 (-) |
| G174505 | NA | other | downstream | 3238679 | 66692408 ~ 66692850 (-) |
| G173696 | LOC106560906 | other | downstream | 3540763 | 66375226 ~ 66390766 (-) |
| G173675 | NA | other | downstream | 3593143 | 66335412 ~ 66338386 (-) |
| LOC110501848 | NA | other | upstream | 628921 | 70552263 ~ 70642587 (-) |
| fam169b | fam169b | other | upstream | 837557 | 70769140 ~ 70773282 (-) |
| G179215 | NA | other | upstream | 973771 | 70905372 ~ 70906254 (-) |
| ttc23 | ttc23 | other | upstream | 995089 | 70926632 ~ 70945359 (-) |
| G179310 | mef2a | other | upstream | 1066444 | 70998045 ~ 71070204 (-) |
