Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110533853 |
| gene name | LOC106561194 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 72250884 ~ 72253809 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ras-related and estrogen-regulated growth inhibitor-like protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021618405.2 | False | 1574 | mRNA | 0.41 | 4 | 72250884 | 72253809 |
| TU205289 | True | 290 | TUCP | 0.50 | 1 | 72253438 | 72253727 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495604 | LOC106573778 | coding | upstream | 185685 | 72059717 ~ 72065199 (+) |
| LOC110495562 | LOC106561144 | coding | upstream | 242621 | 71995694 ~ 72008263 (+) |
| LOC118937292 | NA | coding | upstream | 268063 | 71961719 ~ 71982821 (+) |
| LOC118941481 | NA | coding | upstream | 290785 | 71944685 ~ 71960099 (+) |
| LOC110495533 | lysmd4 | coding | upstream | 478638 | 71766251 ~ 71772246 (+) |
| LOC110495632 | LOC106561195 | coding | downstream | 82993 | 72336802 ~ 72343356 (+) |
| tln2b | LOC106561152 | coding | downstream | 634508 | 72888317 ~ 73030225 (+) |
| LOC110495666 | LOC106573503 | coding | downstream | 802319 | 73056128 ~ 73069598 (+) |
| lactb | LOC106561153 | coding | downstream | 818608 | 73072417 ~ 73075269 (+) |
| tmem266 | LOC106561154 | coding | downstream | 830480 | 73084289 ~ 73146123 (+) |
| G180809 | NA | non-coding | upstream | 1008 | 72249643 ~ 72249876 (+) |
| G180502 | LOC100380853 | non-coding | upstream | 171429 | 72079074 ~ 72079455 (+) |
| G180501 | NA | non-coding | upstream | 174725 | 72075933 ~ 72076159 (+) |
| G180481 | NA | non-coding | upstream | 198344 | 72052304 ~ 72052540 (+) |
| G180483 | NA | non-coding | upstream | 204252 | 72043386 ~ 72046632 (+) |
| G180844 | NA | non-coding | downstream | 17184 | 72270993 ~ 72271320 (+) |
| G180855 | NA | non-coding | downstream | 25394 | 72279203 ~ 72279529 (+) |
| G180865 | NA | non-coding | downstream | 34207 | 72288016 ~ 72288241 (+) |
| G180893 | NA | non-coding | downstream | 59527 | 72313336 ~ 72313614 (+) |
| G180895 | NA | non-coding | downstream | 61868 | 72315677 ~ 72315985 (+) |
| igf1ra | igf1r | other | upstream | 1442980 | 70794530 ~ 70905277 (+) |
| G177812 | NA | other | upstream | 2137444 | 70107286 ~ 70113440 (+) |
| G177067 | NA | other | upstream | 2793451 | 69456558 ~ 69457433 (+) |
| G176725 | lonp2 | other | upstream | 3292998 | 68956263 ~ 68957886 (+) |
| G181995 | NA | other | downstream | 1087571 | 73341380 ~ 73342277 (+) |
| LOC110501876 | LOC106561170 | other | downstream | 1322956 | 73456669 ~ 73580075 (+) |
| G182139 | LOC106561173 | other | downstream | 1353083 | 73606892 ~ 73610237 (+) |
| G182144 | NA | other | downstream | 1368727 | 73622536 ~ 73624518 (+) |
| G183361 | NA | other | downstream | 2275840 | 74529649 ~ 74535026 (+) |
