LOC110495632 (LOC106561195)



Basic Information


Item Value
gene id LOC110495632
gene name LOC106561195
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 72336802 ~ 72343356 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021570969.2
cacagGTCAATATGCAACGATAAAGATGCTGAGGAAGGGTGCGGAGAACAAACCTCAAAATTGCAGTATTGTACTTGAAGTCTGATAATCGCAATAGTTATCTCCAATACTATATTAAGCGGGCGTTCAACGGCTATACCATTATCTCCTATTATGAAAGCATTATAGAAAACAATTAAGAAACGCTTTTATACCATCTGCAACAACTTCAGGGGGGAAAGAACTGAAAGCGTAATCTTGTCACAAAGTTTTTTTCCTTTCACTGGGATAAGGCAAAACAAAATATTGCGGCAGCGCGATTCATGAGGAACGAACAGGTGCTTTTGAAGGGGAATTTGCCGCCACTTTAACAGGGTGACCTGCTCATATGAACACATTGCTGGAGAACCAGAGAAGATATTGTCTCTGGTGTTCCTGTGGGATATGAATGACAGCTTGAGAATGTCACATGAGATCATGATGTTTTACCAAATGATGGAACAAGCCCAGAACACCAGCTGCGAAGCACCCACCCCCATCTGCAATTCGAGTGCAAATGGAGACTCACTACAGCTGCCCACCTTCTCCACAGCAGCCAAAGTCAGAGTAATCATTACTTTCACTCTGTGTGCCATGTCAGCTGTCTGTAACCTCGCTGTGCTGTGGGCCGCCAATACCAACGGAAAGCGCAAGTCCCACGTTAGGATATTAATAATTAACTTGACTGTGGCAGACCTGCTGGTGACTTTCATCGTCATGCCTGTTGATGCTGTCTGGAATATCACAGTTCAGTGGCAGGCAGGAGACGTCGCCTGTAGGCTGCTGATGTTCATGAAACTTGTTGCCATGTACTCCTGTGCTTTTGTCACAGTGGTCATTAGCTTGGACCGCCAGTCTGCTATCCTCAACCCACTGGCCATCAATGAGGCCAAGAAGAGAAGCAAGATCATGTTGTCTGTGGCGTGGGTGATGAGTGTGATTCTGTCTGTTCCCCAGATGCTGATATTCCACAGTGTGACCATCACGGTTCCAGAGAAGTTTACCCAGTGCACTACTCGTGGGAGCTTTGTCCAACACTGGCAGGAAACCCTGTACAACATGTTCACCTTTGCTTGTCTTTTCCTGCTGCCACTGATCATCATGATCTTCTGTTACACACGTATCCTGGTAGAGATATCCAGTCGCATGACCCACGGAAACATGTCTTCTAAGGAGATACATCTCCGACGCTCTCACAACAACATTCCAAAAGCACGGATGAGGACTTTGAAGATGAGCATTGTTATCGTGACATCCTTCATCGTCTGCTGGACCCCTTACTACCTGTTGGGACTGTGGTACTGGTTCTTCCCTGACGATATGGATGAGACGGTCTCTCATTCTTTAACTCATATGCTCTTTATTTTTGGTCTCTTCAATGCCTGTTTGGACCCAATAACTTACGGCCTGTTCACCATCCATTTCCGCCATGGCCTGAAGCGCTACTGTCGGAGCACAGCCACGTTCAGCCGTGAGTCAGAGAACAACACTACCCTGACCGGCTCTTTCAGGCGCTCCCCCTTCCGCCTGACACGGCTTACCCAGCAAGGCCAGACGTCCATCACTGGCCAGATGGCAGAGGAGGAACAGGTCAAGAAAACCTGCCACTATAGCAACTACCTCACAGTtcacagcagtggagaaggtgaccCAGGTCCGGCCAGTCCTGAAAGCACTATATGAGGGATTAGAATGCGTCCTACTAAAGAACATTGCTTACCTTAATCTTCATACCTTCATCTGCTGGCTCACAATTAATACTTTGAAAAACTCATTGTTGTGCTGCATGAAATCAGATTGGATTAATTTTCACATTCAGCCAGATGGGGTTTACAGTGTAAATCATGGTTTCCCCAATAGGTTTGCGTATTTGGCTGGCAGTTGATACATACACAGTGCAATTGCAAAGTATTTAGACCacttgactgtttccacattatgttacgctacggccgtattctaaaattgattaaattaaaca

Function


NR:

description
gonadotropin-releasing hormone II receptor-like

GO: NA

KEGG:

id description
K04280 GNRHR; gonadotropin-releasing hormone receptor

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021570969.2 True 1999 mRNA 0.46 4 72336802 72343356
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110533853 LOC106561194 coding upstream 82993 72250884 ~ 72253809 (+)
LOC110495604 LOC106573778 coding upstream 271603 72059717 ~ 72065199 (+)
LOC110495562 LOC106561144 coding upstream 328539 71995694 ~ 72008263 (+)
LOC118937292 NA coding upstream 353981 71961719 ~ 71982821 (+)
LOC118941481 NA coding upstream 376703 71944685 ~ 71960099 (+)
tln2b LOC106561152 coding downstream 544961 72888317 ~ 73030225 (+)
LOC110495666 LOC106573503 coding downstream 712772 73056128 ~ 73069598 (+)
lactb LOC106561153 coding downstream 729061 73072417 ~ 73075269 (+)
tmem266 LOC106561154 coding downstream 740933 73084289 ~ 73146123 (+)
isl2a LOC106561155 coding downstream 820403 73163759 ~ 73169203 (+)
G180903 NA non-coding upstream 13292 72323230 ~ 72323510 (+)
G180902 NA non-coding upstream 14021 72322543 ~ 72322781 (+)
G180901 NA non-coding upstream 14654 72321926 ~ 72322148 (+)
G180895 NA non-coding upstream 20817 72315677 ~ 72315985 (+)
G180893 NA non-coding upstream 23188 72313336 ~ 72313614 (+)
G180943 NA non-coding downstream 4955 72348311 ~ 72348675 (+)
G180945 NA non-coding downstream 6489 72349845 ~ 72351306 (+)
G180986 NA non-coding downstream 35782 72379138 ~ 72379344 (+)
G180989 NA non-coding downstream 37321 72380677 ~ 72380890 (+)
G181024 NA non-coding downstream 63595 72406951 ~ 72407308 (+)
igf1ra igf1r other upstream 1528898 70794530 ~ 70905277 (+)
G177812 NA other upstream 2223362 70107286 ~ 70113440 (+)
G177067 NA other upstream 2879369 69456558 ~ 69457433 (+)
G181995 NA other downstream 998024 73341380 ~ 73342277 (+)
LOC110501876 LOC106561170 other downstream 1233409 73456669 ~ 73580075 (+)
G182139 LOC106561173 other downstream 1263536 73606892 ~ 73610237 (+)
G182144 NA other downstream 1279180 73622536 ~ 73624518 (+)
G183361 NA other downstream 2186293 74529649 ~ 74535026 (+)

Expression


LOC110495632(LOC106561195) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.4.
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LOC110495632(LOC106561195) Expression in each Bioproject

Bar chart with 17 bars.
LOC110495632(LOC106561195) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 8.
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Co-expression Network