Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118937294 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 72774064 ~ 72775649 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005034538.1 | True | 496 | mRNA | 0.43 | 3 | 72774064 | 72775649 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| roraa | LOC106561150 | coding | downstream | 29552 | 72456866 ~ 72744512 (-) |
| LOC118941485 | NA | coding | downstream | 464093 | 72300332 ~ 72309971 (-) |
| LOC110495618 | LOC106561149 | coding | downstream | 598617 | 72106006 ~ 72175447 (-) |
| LOC100135856 | LOC100135856 | coding | downstream | 683281 | 72070481 ~ 72090783 (-) |
| LOC110495580 | LOC106561145 | coding | downstream | 723879 | 72012258 ~ 72050185 (-) |
| c2cd4a | LOC106561196 | coding | upstream | 96322 | 72833292 ~ 72877678 (-) |
| LOC110495704 | nrg4 | coding | upstream | 300371 | 73076020 ~ 73078379 (-) |
| etfa | LOC100194695 | coding | upstream | 370572 | 73146221 ~ 73157311 (-) |
| scaper | LOC106561156 | coding | upstream | 401072 | 73176721 ~ 73292819 (-) |
| LOC100653450 | LOC106561160 | coding | upstream | 548526 | 73324175 ~ 73328878 (-) |
| G181545 | NA | non-coding | downstream | 9661 | 72764193 ~ 72764403 (-) |
| G181544 | NA | non-coding | downstream | 10387 | 72763470 ~ 72763677 (-) |
| G181529 | NA | non-coding | downstream | 16358 | 72757448 ~ 72757706 (-) |
| G181520 | NA | non-coding | downstream | 21575 | 72752264 ~ 72752489 (-) |
| G181515 | NA | non-coding | downstream | 24199 | 72749634 ~ 72749865 (-) |
| G182443 | NA | non-coding | upstream | 150076 | 72925725 ~ 72928284 (-) |
| G182487 | NA | non-coding | upstream | 211515 | 72987164 ~ 72989040 (-) |
| G182506 | NA | non-coding | upstream | 226447 | 73002096 ~ 73089478 (-) |
| G182508 | NA | non-coding | upstream | 228250 | 73003899 ~ 73004346 (-) |
| G180716 | NA | other | downstream | 662401 | 72110968 ~ 72111663 (-) |
| G179754 | NA | other | downstream | 1299085 | 71474372 ~ 71474979 (-) |
| LOC110495479 | mctp2 | other | downstream | 1631880 | 71134265 ~ 71164057 (-) |
| G179310 | mef2a | other | downstream | 1703860 | 70998045 ~ 71070204 (-) |
| ttc23 | ttc23 | other | downstream | 1829303 | 70926632 ~ 70945359 (-) |
| G182494 | NA | other | upstream | 251735 | 73011478 ~ 73066724 (-) |
| G182708 | NA | other | upstream | 569301 | 73344950 ~ 73345847 (-) |
| G182882 | NA | other | upstream | 900563 | 73676212 ~ 73676423 (-) |
