lactb (LOC106561153)


Basic Information

Item Value
gene id lactb
gene name LOC106561153
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 73072417 ~ 73075269 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571075.2
ttaacccactgttccccggtaggccgtcaatgttaataagaatttgatcttaactgacttgcctagttaaataaaggttaataatgTTTtaagcaaagttcaagggggttgtactacagtatagtaGCGGTAATGCAACATCTAGTGGATGCCAAACGCCGTTAAACCTCATCGAATAAGAAAAATAAGCGTTTGAAATTGATCTGAGCTCCCAATTCGTCATTTGGCTAGTACTGTCTGGATCGGGGATTGATTGATTTTGTCTGACGCAAGCAGGGGACTCAGGAAATGTTTCAAACTCGATTCGATTGTAGCGATTTTCTACAGTAAAACAAACGTCAGTCGGTCGATAGGCTACAGAAAAGTAAATATGTCGCGGTTATTTTACTCGCCATTCAAGCGTTTTTGTGTCAAGTGTAAAGATTTTCCTGCAGTGACCGCGCGTTGTTATTCCTCTTTGTTGACTCCAATTCGGTGCCCCCAGCTGTCAAAACAACAGACCTTTGTCGTGTTACAACAGCAGCAGAGAAAATGTTTCGGACCTTCACGCCTAACTTCTCGGTTTTACTCAAGGTCAAAGTTTTGGATTGGGGGAATAGGTGCGGGCATTGTTTTAGCTTTGGGATTGAAATATCACACTGACATAGCTGAGCTCTCATGTGAAGAGGACTTCCAACATACTGGAAGATATGGTGCTGCCATTCAAGTTAGCAGAGACCTTGTTCAGCGGATAAAGGTACAGGATGAGGTTGGGGCTCCAGGGCTGGTGGTCGGTGTGTCTGTGGATGGCTCTCAAGTCTGGTGCGAAGGACTTGGCTATGCTGACTTAGAGAACCGTGTGCCCTGTGGACCAAAGACAGTGCTGAGGATCGCCAGCATCAGTAAACCCCTAACTACAGCAGCAGCAGCCCGCCTGTGGGAGGAGGGGAAGCTTGACCTCGATGCCCCTGTCCAGAAATACGTCCCTGAGTTCCCCCAAAAACAGTTTGAGGGAGAAGAAGTGATAATAACTCCACGGTTGATTCTCTCTCATCTGAGTGGCATACGGCACTACGAGAAGGATGCCAAGAAagtgagggaggacagggagaaggCCAAACGACATTTAAAACTGCCTGGTAAAGAGGAAAAGAGCTTGTCTGAAAACAAACCCAAGACCGAGGACAGCAGCACCAAGAGCAAGGAAAACAAACCGGCTCAGAAGAAAAAAGAGTTTGAGCAAGAAGAGTACTACCTGAAAGACCGCTTTGAAAGTGTCATTCATGCCTTGGACCTGTTCAAAGACGACACTCTCGTTTTCAAACCTGGCACCACCTTCCTGTACTCAACCCACGCCTTCACCCTCCTCAGTGCCGTGGTGGAGAGAGCTGCTGGCCAGCACTTCCTGGATCACATGATGAAGATGTTCAGGGAACTGGGCATGCTCAACACTGTGCCAGATGAGAATGACCCCATTATCTATAACCGCTCAAGgtttTATCATTTCAATAAGAAAGGACGCATAGTAAACTGCCCTTACGTGGATAACTCCTATAAATGGGCAGGAGGTGGCTTTCTCTCCACTGTGGGAGACCTGCTCCTGTTTGGGAATGCTCTGCTCTTCAGCTACCAAGTGGCCAACCTGAAGGACTGCACAGACCTCCTGCCTGGCTTCCTCAAACCAGAGACAGCCCAGGCTCTGTGGGCCCCTGTGGACAAGACAGAGACCTCCTGGGATAAGGATGGGCTGTATGCACAGGGCTGGCTGGTGGTGGAGAAGGAGCAGAAGTATGGCCAGTGCAGGAGGCGCAGGCATTATGTCTCTCACACAGGGGGCGCCGTGGGGGCCAGCAGTGTCCTGCTGGTTTTGCCCAGTAAGACAGTCCAGCATCCCGAAGGACAGACTACAGCCCTACCTCAGGGAATAGTGGTGACCATCATCACTAACATGCAGTCTGTGGGACTCAACAGCACAGCACTGAAAATCGCCCACGAGTTTGACAAAGCTAGAGGCTAATAAGAGTTTATATTCTTTACAAATATAGAAGGATAAAACTACCGCAAAGTGTCAAGGCACTACAATATCTTTACTAATGGCAGTGGATGAATGATTTATCAGCAGCACTCTTTTGTATATTTGAATTTGATACTGCTTTTATACATTTCAGCCCATTTTGTTGAGTAATAAAAGACAATGTTTGACATGGG
>XM_021571084.2
taacccactgttccccggtaggccgtcaatgttaataagaatttgatcttaactgacttgcctagttaaataaaggttaataatgTTTtaagcaaagttcaagggggttgtactacagtatagtaGCGGTAATGCAACATCTAGTGGATGCCAAACGCCGTTAAACCTCATCGAATAAGAAAAATAAGCGTTTGAAATTGATCTGAGCTCCCAATTCGTCATTTGGCTAGTACTGTCTGGATCGGGGATTGATTGATTTTGTCTGACGCAAGCAGGGGACTCAGGAAATGTTTCAAACTCGATTCGATTGTAGCGATTTTCTACAGTAAAACAAACGTCAGTCGGTCGATAGGCTACAGAAAAGTAAATATGTCGCGGTTATTTTACTCGCCATTCAAGCGTTTTTGTGTCAAGTGTAAAGATTTTCCTGCAGTGACCGCGCGTTGTTATTCCTCTTTGTTGACTCCAATTCGGTGCCCCCAGCTGTCAAAACAACAGACCTTTGTCGTGTTACAACAGCAGCAGAGAAAATGTTTCGGACCTTCACGCCTAACTTCTCGGTTTTACTCAAGGTCAAAGTTTTGGATTGGGGGAATAGGTGCGGGCATTGTTTTAGCTTTGGGATTGAAATATCACACTGACATAGCTGAGCTCTCATGTGAAGAGGACTTCCAACATACTGGAAGATATGGTGCTGCCATTCAAGTTAGCAGAGACCTTGTTCAGCGGATAAAGGATGAGGTTGGGGCTCCAGGGCTGGTGGTCGGTGTGTCTGTGGATGGCTCTCAAGTCTGGTGCGAAGGACTTGGCTATGCTGACTTAGAGAACCGTGTGCCCTGTGGACCAAAGACAGTGCTGAGGATCGCCAGCATCAGTAAACCCCTAACTACAGCAGCAGCAGCCCGCCTGTGGGAGGAGGGGAAGCTTGACCTCGATGCCCCTGTCCAGAAATACGTCCCTGAGTTCCCCCAAAAACAGTTTGAGGGAGAAGAAGTGATAATAACTCCACGGTTGATTCTCTCTCATCTGAGTGGCATACGGCACTACGAGAAGGATGCCAAGAAagtgagggaggacagggagaaggCCAAACGACATTTAAAACTGCCTGGTAAAGAGGAAAAGAGCTTGTCTGAAAACAAACCCAAGACCGAGGACAGCAGCACCAAGAGCAAGGAAAACAAACCGGCTCAGAAGAAAAAAGAGTTTGAGCAAGAAGAGTACTACCTGAAAGACCGCTTTGAAAGTGTCATTCATGCCTTGGACCTGTTCAAAGACGACACTCTCGTTTTCAAACCTGGCACCACCTTCCTGTACTCAACCCACGCCTTCACCCTCCTCAGTGCCGTGGTGGAGAGAGCTGCTGGCCAGCACTTCCTGGATCACATGATGAAGATGTTCAGGGAACTGGGCATGCTCAACACTGTGCCAGATGAGAATGACCCCATTATCTATAACCGCTCAAGgtttTATCATTTCAATAAGAAAGGACGCATAGTAAACTGCCCTTACGTGGATAACTCCTATAAATGGGCAGGAGGTGGCTTTCTCTCCACTGTGGGAGACCTGCTCCTGTTTGGGAATGCTCTGCTCTTCAGCTACCAAGTGGCCAACCTGAAGGACTGCACAGACCTCCTGCCTGGCTTCCTCAAACCAGAGACAGCCCAGGCTCTGTGGGCCCCTGTGGACAAGACAGAGACCTCCTGGGATAAGGATGGGCTGTATGCACAGGGCTGGCTGGTGGTGGAGAAGGAGCAGAAGTATGGCCAGTGCAGGAGGCGCAGGCATTATGTCTCTCACACAGGGGGCGCCGTGGGGGCCAGCAGTGTCCTGCTGGTTTTGCCCAGTAAGACAGTCCAGCATCCCGAAGGACAGACTACAGCCCTACCTCAGGGAATAGTGGTGACCATCATCACTAACATGCAGTCTGTGGGACTCAACAGCACAGCACTGAAAATCGCCCACGAGTTTGACAAAGCTAGAGGCTAATAAGAGTTTATATTCTTTACAAATATAGAAGGATAAAACTACCGCAAAGTGTCAAGGCACTACAATATCTTTACTAATGGCAGTGGATGAATGATTTATCAGCAGCACTCTTTTGTATATTTGAATTTGATACTGCTTTTATACATTTCAGCCCATTTTGTTGAGTAATAAAAGACAATGTTTGACATGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K17382 LACTB; serine beta-lactamase-like protein LACTB, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571075.2 False 2187 mRNA 0.47 6 73072417 73075269
XM_021571084.2 True 2180 mRNA 0.47 6 73072418 73075269
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110495666 LOC106573503 coding upstream 2819 73056128 ~ 73069598 (+)
tln2b LOC106561152 coding upstream 42192 72888317 ~ 73030225 (+)
LOC110495632 LOC106561195 coding upstream 729061 72336802 ~ 72343356 (+)
LOC110533853 LOC106561194 coding upstream 818608 72250884 ~ 72253809 (+)
LOC110495604 LOC106573778 coding upstream 1007218 72059717 ~ 72065199 (+)
tmem266 LOC106561154 coding downstream 9020 73084289 ~ 73146123 (+)
isl2a LOC106561155 coding downstream 88490 73163759 ~ 73169203 (+)
LOC110495782 LOC106561158 coding downstream 224311 73299580 ~ 73316950 (+)
si:dkey-24l11.2 LOC106561161 coding downstream 276531 73351800 ~ 73361169 (+)
LOC110495809 LOC106561197 coding downstream 286040 73361309 ~ 73362530 (+)
G181706 NA non-coding upstream 136985 72887273 ~ 72935432 (+)
G181601 NA non-coding upstream 265242 72806900 ~ 72807175 (+)
G181600 NA non-coding upstream 265717 72806371 ~ 72806700 (+)
G181040 NA non-coding upstream 609205 72456880 ~ 72463212 (+)
G181013 NA non-coding upstream 630535 72433857 ~ 72441882 (+)
G181833 NA non-coding downstream 18684 73093953 ~ 73095214 (+)
G181841 NA non-coding downstream 36232 73111501 ~ 73157853 (+)
G181854 NA non-coding downstream 56890 73132159 ~ 73132598 (+)
G181859 NA non-coding downstream 61518 73136787 ~ 73407337 (+)
G181887 NA non-coding downstream 118078 73193347 ~ 73194365 (+)
igf1ra igf1r other upstream 2264513 70794530 ~ 70905277 (+)
G177812 NA other upstream 2958977 70107286 ~ 70113440 (+)
G177067 NA other upstream 3614984 69456558 ~ 69457433 (+)
G181995 NA other downstream 266111 73341380 ~ 73342277 (+)
LOC110501876 LOC106561170 other downstream 501496 73456669 ~ 73580075 (+)
G182139 LOC106561173 other downstream 531623 73606892 ~ 73610237 (+)
G182144 NA other downstream 547267 73622536 ~ 73624518 (+)
G183361 NA other downstream 1454380 74529649 ~ 74535026 (+)

Expression

lactb(LOC106561153) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
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lactb(LOC106561153) Expression in each Bioproject

Bar chart with 21 bars.
lactb(LOC106561153) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
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Co-expression Network