isl2a (LOC106561155)


Basic Information

Item Value
gene id isl2a
gene name LOC106561155
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 73163759 ~ 73169203 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955095.1
ttcccacctctcacTCGAGGAATAGAAGTTGTCAGCCAGGAACGGGACGGGGCAGTCTCCCACTCCATTTCTTCAGCTATAGGCCTGCACTATCCCTCCTGTATGGTGGATATTATATTCAATTCTTCTTTCTTGGGTGATATGGGGGATCATTCCAAAAAGAAGTCTGGAATCGCAATGTGTGTGGGCTGTGGGAGTCAGATCCACGACCAGTACATCCTGCGGGTCGCCCCGGACCTGGAGTGGCATGCTGCGTGTCTGAAGTGCGCGGAATGCAGTCAGTACCTGGATGAGACGTGCACTTGCTTCGTCCGAGATGGCAAGACATACTGCAAAAGAGATTATGTAAGCAGCGATCTAGTGATGAGAGCTCGTGACAACGTGTACCACATGGAGTGTTTTAGGTGCTCCGTGTGCAGCAGGCATCTCCTGCCGGGGGATGAGTTCTCTCTGCGGGACGAGGAGCTGCTGTGTCGAGCTGATCATGGTTTACTGATGGAACAGGCCTCAGCGGGAAGTCCCCTCAGTCCGGGAATGATTCACTCCAGGTCTCTTCATATTGCAGATCCTGTGTCTGTTCGACAGCCTCCTCATCGGAACCACGTCCACAAGCAGTCTGAGAAGACCACTCGGGTGCGAACAGTATTAAACGAGAAGCAGCTTCATACCCTTCGGACCTGTTACAATGCCAACCCAAGACCAGACGCACTTATGAAAGAACAATTGGTTGAGATGACCGGTCTTAGCCCAAGGGTCATCAGAGTTTGGTTCCAGAACAAACGTTGTAAAGACAAGAAGAGATCGATATTCATGAAGCAACTTCAACAACAGCATCACAGCGATAAAACGAATCTTCAGGGACTGACGGGTACGCCTCTGGTGGCAGGCAGTCCAATTCGACACGACAACACGGTCCAAGGGAACCCAGTAGAGGTGCAGACTTACCAGCCCCCATGGAAGGCCCTGAGCGAGTTCGCCTTGCAGAGTGATCTGGACCAGCCCGCCTTCCAGCAGTTGGTGTCTTTTTCTGAATCGGGCTCCATGGGTAACTCCTCCGGCAGTGATGTGACCTCCCTGTCGTCGCAGTTGCCGGACACACCGAACAGCATGGTAGCGAGTCCGGTGGACACGTGAGACCAGCCCAACAGGTCGCTTCGAACCCCAGCATGCTCCCGCGTGTCCTGCATGAGAACTGGCCAGCTCACAGCATGGATAGGAAAATGATTTTTTATCTTACCTACAATGTCGTTGGAATTGTCTACGAGGATACCATTTTTTTTCACGGATGGACCTGTCCACAGCATTGTTCAGGATCAGATGAATTTCAAGGTACCAGTGTGCGAACCAAGGCCTATAACTAGCCTTGCAGCCTTGAGCCTCGGATCCTACATGGTTGGACATACGTGAGGATTATATCTACACTTTATTATGAGCCGCTAACTTATAATGAACATATCAGAACGTTATCCATAGTGGCCAACACGGTCATCATTGTAGTTTCATCTAAATTTCCTATGCTGGGTTGGGATCATATGGAGCCCCATGTCTGTATAGAAGTGCATGATTTCTAGAGATTATGAATATCAAGTCTTGTAAAATATTGTAATTAAGTGGATGAGAGAAATTGTTTGAGCCGTTTAAGAAAAAGTAAGTTATTATTTATTGTGAGGAAAGACAGGTAATCTTAATAAACCCATATTAATTGTTTCATGTTTAATGAACTGCATGCGAAATCTCTGCAGTAATTCATTAAAATATTGACCGAAATTTCAATTGACAAAATAAATCACTTTATGTATTTATGAAACGGCTATTTCAGCACTTTATGGTAGGTTTAGGCCTAATTTAAATTGTCACTTTTAGGATGAAAAACGTCTGAGATTTATAATAGGCCAATATAATCTCAAATTAATTTCGAAACACTCAAAATAAATGATTTGATGTCAGTTTAGAGGACACTATTTCCGAAAATGGCTAGGGTTGTTAGACCAAACCAATTTGTAGGCTTGTCAATTTAATTGTATTGGCTATTCAAAATGGATAAAGGAGCAGCCTCATAGCGGGTCAAATTCAAGCATTTGCGGCCTGTTAATCACTACCGAGGACAAATTGTTCATTGAATGGGCCTCCACATATGGATTTGCGATGTGATCATTCCAGTTTCACTTGTAAAGTCACAAGTCTAGACAGAAGACAGGGCCAGGCGGCTCTTTATCTATGCTTGGCATCACCTGCAAACGATACATTGAACGGAACCACAACAAACCCACTTCTCTGTCGCTGGAGTCAGTGCTAAAGGGGACTCTCACCCTGATAACGCTTTCTGGAGTGTCTTGGGTTTATTTTCATTTCAGCCGGAATCCCGGATAGGAATAGCCTCTGGACATGGGGTACGTCAAGCTTGCCTACGACTGACATATTGCCAACTAGACATCAACAATGTATTGTCGAGGATGAACTTTCTGAACAGAGGATGCAATAGCAGTCTAATCTATTTATCACGACATGAAACAGCAATTGACGTCTGGCATCAAATCAAAAAGCCATTAGGTCTATACTCTATCTTGCTATGTCAATTATGTCAATAATTGCTATGCATCCAGTAGCCTACTGACCAATAAATCCAGGTTT
>XM_036955085.1
ATGGTGGATATTATATTCAATTCTTCTTTCTTGGGTGATATGGGGGATCATTCCAAAAAGAAGTCTGGAATCGCAATGTGTGTGGGCTGTGGGAGTCAGATCCACGACCAGTACATCCTGCGGGTCGCCCCGGACCTGGAGTGGCATGCTGCGTGTCTGAAGTGCGCGGAATGCAGTCAGTACCTGGATGAGACGTGCACTTGCTTCGTCCGAGATGGCAAGACATACTGCAAAAGAGATTATGTAAGATTATTTGGGATTAAATGTGCAAACTGTAACATTGGCTTCTGCAGCAGCGATCTAGTGATGAGAGCTCGTGACAACGTGTACCACATGGAGTGTTTTAGGTGCTCCGTGTGCAGCAGGCATCTCCTGCCGGGGGATGAGTTCTCTCTGCGGGACGAGGAGCTGCTGTGTCGAGCTGATCATGGTTTACTGATGGAACAGGCCTCAGCGGGAAGTCCCCTCAGTCCGGGAATGATTCACTCCAGGTCTCTTCATATTGCAGATCCTGTGTCTGTTCGACAGCCTCCTCATCGGAACCACGTCCACAAGCAGTCTGAGAAGACCACTCGGGTGCGAACAGTATTAAACGAGAAGCAGCTTCATACCCTTCGGACCTGTTACAATGCCAACCCAAGACCAGACGCACTTATGAAAGAACAATTGGTTGAGATGACCGGTCTTAGCCCAAGGGTCATCAGAGTTTGGTTCCAGAACAAACGTTGTAAAGACAAGAAGAGATCGATATTCATGAAGCAACTTCAACAACAGCATCACAGCGATAAAACGAATCTTCAGGGACTGACGGGTACGCCTCTGGTGGCAGGCAGTCCAATTCGACACGACAACACGGTCCAAGGGAACCCAGTAGAGGTGCAGACTTACCAGCCCCCATGGAAGGCCCTGAGCGAGTTCGCCTTGCAGAGTGATCTGGACCAGCCCGCCTTCCAGCAGTTGGTGTCTTTTTCTGAATCGGGCTCCATGGGTAACTCCTCCGGCAGTGATGTGACCTCCCTGTCGTCGCAGTTGCCGGACACACCGAACAGCATGGTAGCGAGTCCGGTGGACACGTGAGACCAGCCCAACAGGTCGCTTCGAACCCCAGCATGCTCCCGCGTGTCCTGCATGAGAACTGGCCAGCTCACAGCATGGATAGGAAAATGATTTTTTATCTTACCTACAATGTCGTTGGAATTGTCTACGAGGATACCATTTTTTTTCACGGATGGACCTGTCCACAGCATTGTTCAGGATCAGATGAATTTCAAGGTACCAGTGTGCGAACCAAGGCCTATAACTAGCCTTGCAGCCTTGAGCCTCGGATCCTACATGGTTGGACATACGTGAGGATTATATCTACACTTTATTATGAGCCGCTAACTTATAATGAACATATCAGAACGTTATCCATAGTGGCCAACACGGTCATCATTGTAGTTTCATCTAAATTTCCTATGCTGGGTTGGGATCATATGGAGCCCCATGTCTGTATAGAAGTGCATGATTTCTAGAGATTATGAATATCAAGTCTTGTAAAATATTGTAATTAAGTGGATGAGAGAAATTGTTTGAGCCGTTTAAGAAAAAGTAAGTTATTATTTATTGTGAGGAAAGACAGGTAATCTTAATAAACCCATATTAATTGTTTCATGTTTAATGAACTGCATGCGAAATCTCTGCAGTAATTCATTAAAATATTGACCGAAATTTCAATTGACAAAATAAATCACTTTATGTATTTATGAAACGGCTATTTCAGCACTTTATGGTAGGTTTAGGCCTAATTTAAATTGTCACTTTTAGGATGAAAAACGTCTGAGATTTATAATAGGCCAATATAATCTCAAATTAATTTCGAAACACTCAAAATAAATGATTTGATGTCAGTTTAGAGGACACTATTTCCGAAAATGGCTAGGGTTGTTAGACCAAACCAATTTGTAGGCTTGTCAATTTAATTGTATTGGCTATTCAAAATGGATAAAGGAGCAGCCTCATAGCGGGTCAAATTCAAGCATTTGCGGCCTGTTAATCACTACCGAGGACAAATTGTTCATTGAATGGGCCTCCACATATGGATTTGCGATGTGATCATTCCAGTTTCACTTGTAAAGTCACAAGTCTAGACAGAAGACAGGGCCAGGCGGCTCTTTATCTATGCTTGGCATCACCTGCAAACGATACATTGAACGGAACCACAACAAACCCACTTCTCTGTCGCTGGAGTCAGTGCTAAAGGGGACTCTCACCCTGATAACGCTTTCTGGAGTGTCTTGGGTTTATTTTCATTTCAGCCGGAATCCCGGATAGGAATAGCCTCTGGACATGGGGTACGTCAAGCTTGCCTACGACTGACATATTGCCAACTAGACATCAACAATGTATTGTCGAGGATGAACTTTCTGAACAGAGGATGCAATAGCAGTCTAATCTATTTATCACGACATGAAACAGCAATTGACGTCTGGCATCAAATCAAAAAGCCATTAGGTCTATACTCTATCTTGCTATGTCAATTATGTCAATAATTGCTATGCATCCAGTAGCCTACTGACCAATAAATCCAGGTTT
>XM_036955099.1
CGACCAGTACATCCTGCGGGTCGCCCCGGACCTGGAGTGGCATGCTGCGTGTCTGAAGTGCGCGGAATGCAGTCAGTACCTGGATGAGACGTGCACTTGCTTCGTCCGAGATGGCAAGACATACTGCAAAAGAGATTATATTATTTGGGATTAAATGTGCAAACTGTAACATTGGCTTCTGCAGCAGCGATCTAGTGATGAGAGCTCGTGACAACGTGTACCACATGGAGTGTTTTAGGTGCTCCGTGTGCAGCAGGCATCTCCTGCCGGGGGATGAGTTCTCTCTGCGGGACGAGGAGCTGCTGTGTCGAGCTGATCATGGTTTACTGATGGAACAGGCCTCAGCGGGAAGTCCCCTCAGTCCGGGAATGATTCACTCCAGGTCTCTTCATATTGCAGATCCTGTGTCTGTTCGACAGCCTCCTCATCGGAACCACGTCCACAAGCAGTCTGAGAAGACCACTCGGGTGCGAACAGTATTAAACGAGAAGCAGCTTCATACCCTTCGGACCTGTTACAATGCCAACCCAAGACCAGACGCACTTATGAAAGAACAATTGGTTGAGATGACCGGTCTTAGCCCAAGGGTCATCAGAGTTTGGTTCCAGAACAAACGTTGTAAAGACAAGAAGAGATCGATATTCATGAAGCAACTTCAACAACAGCATCACAGCGATAAAACGAATCTTCAGGGACTGACGGGTACGCCTCTGGTGGCAGGCAGTCCAATTCGACACGACAACACGGTCCAAGGGAACCCAGTAGAGGTGCAGACTTACCAGCCCCCATGGAAGGCCCTGAGCGAGTTCGCCTTGCAGAGTGATCTGGACCAGCCCGCCTTCCAGCAGTTGGTGTCTTTTTCTGAATCGGGCTCCATGGGTAACTCCTCCGGCAGTGATGTGACCTCCCTGTCGTCGCAGTTGCCGGACACACCGAACAGCATGGTAGCGAGTCCGGTGGACACGTGAGACCAGCCCAACAGGTCGCTTCGAACCCCAGCATGCTCCCGCGTGTCCTGCATGAGAACTGGCCAGCTCACAGCATGGATAGGAAAATGATTTTTTATCTTACCTACAATGTCGTTGGAATTGTCTACGAGGATACCATTTTTTTTCACGGATGGACCTGTCCACAGCATTGTTCAGGATCAGATGAATTTCAAGGTACCAGTGTGCGAACCAAGGCCTATAACTAGCCTTGCAGCCTTGAGCCTCGGATCCTACATGGTTGGACATACGTGAGGATTATATCTACACTTTATTATGAGCCGCTAACTTATAATGAACATATCAGAACGTTATCCATAGTGGCCAACACGGTCATCATTGTAGTTTCATCTAAATTTCCTATGCTGGGTTGGGATCATATGGAGCCCCATGTCTGTATAGAAGTGCATGATTTCTAGAGATTATGAATATCAAGTCTTGTAAAATATTGTAATTAAGTGGATGAGAGAAATTGTTTGAGCCGTTTAAGAAAAAGTAAGTTATTATTTATTGTGAGGAAAGACAGGTAATCTTAATAAACCCATATTAATTGTTTCATGTTTAATGAACTGCATGCGAAATCTCTGCAGTAATTCATTAAAATATTGACCGAAATTTCAATTGACAAAATAAATCACTTTATGTATTTATGAAACGGCTATTTCAGCACTTTATGGTAGGTTTAGGCCTAATTTAAATTGTCACTTTTAGGATGAAAAACGTCTGAGATTTATAATAGGCCAATATAATCTCAAATTAATTTCGAAACACTCAAAATAAATGATTTGATGTCAGTTTAGAGGACACTATTTCCGAAAATGGCTAGGGTTGTTAGACCAAACCAATTTGTAGGCTTGTCAATTTAATTGTATTGGCTATTCAAAATGGATAAAGGAGCAGCCTCATAGCGGGTCAAATTCAAGCATTTGCGGCCTGTTAATCACTACCGAGGACAAATTGTTCATTGAATGGGCCTCCACATATGGATTTGCGATGTGATCATTCCAGTTTCACTTGTAAAGTCACAAGTCTAGACAGAAGACAGGGCCAGGCGGCTCTTTATCTATGCTTGGCATCACCTGCAAACGATACATTGAACGGAACCACAACAAACCCACTTCTCTGTCGCTGGAGTCAGTGCTAAAGGGGACTCTCACCCTGATAACGCTTTCTGGAGTGTCTTGGGTTTATTTTCATTTCAGCCGGAATCCCGGATAGGAATAGCCTCTGGACATGGGGTACGTCAAGCTTGCCTACGACTGACATATTGCCAACTAGACATCAACAATGTATTGTCGAGGATGAACTTTCTGAACAGAGGATGCAATAGCAGTCTAATCTATTTATCACGACATGAAACAGCAATTGACGTCTGGCATCAAATCAAAAAGCCATTAGGTCTATACTCTATCTTGCTATGTCAATTATGTCAATAATTGCTATGCATCCAGTAGCCTACTGACCAATAAATCCAGGTTT

Function

NR:

description
insulin gene enhancer protein ISL-2A isoform X2

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0048665 neuron fate specification biological_process
GO:0048675 axon extension biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955095.1 False 2631 mRNA 0.45 6 73163759 73169203
XM_036955085.1 False 2574 mRNA 0.45 6 73163861 73169203
XM_036955099.1 True 2465 mRNA 0.45 5 73164346 73169203

Neighbor

gene id symbol gene type direction distance location
tmem266 LOC106561154 coding upstream 17636 73084289 ~ 73146123 (+)
lactb LOC106561153 coding upstream 88490 73072417 ~ 73075269 (+)
LOC110495666 LOC106573503 coding upstream 94161 73056128 ~ 73069598 (+)
tln2b LOC106561152 coding upstream 133534 72888317 ~ 73030225 (+)
LOC110495632 LOC106561195 coding upstream 820403 72336802 ~ 72343356 (+)
LOC110495782 LOC106561158 coding downstream 130377 73299580 ~ 73316950 (+)
si:dkey-24l11.2 LOC106561161 coding downstream 182597 73351800 ~ 73361169 (+)
LOC110495809 LOC106561197 coding downstream 192106 73361309 ~ 73362530 (+)
LOC110495840 LOC106561167 coding downstream 231056 73400259 ~ 73405787 (+)
slc28a1 LOC106561167 coding downstream 239849 73409052 ~ 73418838 (+)
G181841 NA non-coding upstream 5906 73111501 ~ 73157853 (+)
G181854 NA non-coding upstream 31161 73132159 ~ 73132598 (+)
G181833 NA non-coding upstream 68545 73093953 ~ 73095214 (+)
G181706 NA non-coding upstream 228327 72887273 ~ 72935432 (+)
G181601 NA non-coding upstream 356584 72806900 ~ 72807175 (+)
G181887 NA non-coding downstream 24144 73193347 ~ 73194365 (+)
G181930 LOC106561156 non-coding downstream 75692 73244895 ~ 73273032 (+)
G181948 NA non-coding downstream 99824 73269027 ~ 73296683 (+)
G181989 LOC107750509 non-coding downstream 158259 73327462 ~ 73328861 (+)
G181994 NA non-coding downstream 170260 73339463 ~ 73340072 (+)
LOC110533853 LOC106561194 other upstream 910032 72250884 ~ 72253809 (+)
LOC110495604 LOC106573778 other upstream 1098564 72059717 ~ 72065199 (+)
igf1ra igf1r other upstream 2355855 70794530 ~ 70905277 (+)
G177812 NA other upstream 3050319 70107286 ~ 70113440 (+)
G177067 NA other upstream 3706326 69456558 ~ 69457433 (+)
G181995 NA other downstream 172177 73341380 ~ 73342277 (+)
LOC110501876 LOC106561170 other downstream 407562 73456669 ~ 73580075 (+)
G182139 LOC106561173 other downstream 437689 73606892 ~ 73610237 (+)
G182144 NA other downstream 453333 73622536 ~ 73624518 (+)
G183361 NA other downstream 1360446 74529649 ~ 74535026 (+)

Expression


Co-expression Network