Item | Value |
---|---|
gene id | LOC110495809 |
gene name | LOC106561197 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 73361309 ~ 73362530 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
cholesterol 25-hydroxylase-like protein 1, member 1 |
id | name | namespace |
---|---|---|
GO:0006633 | fatty acid biosynthetic process | biological_process |
GO:0055114 | oxidation-reduction process | biological_process |
GO:0016021 | integral component of membrane | cellular_component |
GO:0005506 | iron ion binding | molecular_function |
GO:0016491 | oxidoreductase activity | molecular_function |
id | description |
---|---|
K10223 | CH25H; cholesterol 25-hydroxylase |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021571258.2 | True | 1222 | mRNA | 0.46 | 1 | 73361309 | 73362530 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
si:dkey-24l11.2 | LOC106561161 | coding | upstream | 140 | 73351800 ~ 73361169 (+) |
LOC110495782 | LOC106561158 | coding | upstream | 44359 | 73299580 ~ 73316950 (+) |
isl2a | LOC106561155 | coding | upstream | 192106 | 73163759 ~ 73169203 (+) |
tmem266 | LOC106561154 | coding | upstream | 215186 | 73084289 ~ 73146123 (+) |
lactb | LOC106561153 | coding | upstream | 286040 | 73072417 ~ 73075269 (+) |
LOC110495840 | LOC106561167 | coding | downstream | 37729 | 73400259 ~ 73405787 (+) |
slc28a1 | LOC106561167 | coding | downstream | 46522 | 73409052 ~ 73418838 (+) |
malt3 | LOC106561168 | coding | downstream | 73604 | 73436134 ~ 73454862 (+) |
trnah-gug-2 | NA | coding | downstream | 92902 | 73455432 ~ 73455503 (+) |
LOC110501876 | LOC106561170 | coding | downstream | 94139 | 73456669 ~ 73580075 (+) |
G181994 | NA | non-coding | upstream | 21237 | 73339463 ~ 73340072 (+) |
G181989 | LOC107750509 | non-coding | upstream | 32448 | 73327462 ~ 73328861 (+) |
G181948 | NA | non-coding | upstream | 64626 | 73269027 ~ 73296683 (+) |
G181930 | LOC106561156 | non-coding | upstream | 88277 | 73244895 ~ 73273032 (+) |
G181887 | NA | non-coding | upstream | 166944 | 73193347 ~ 73194365 (+) |
G181965 | NA | non-coding | downstream | 3049 | 73365579 ~ 73366983 (+) |
G182020 | NA | non-coding | downstream | 51132 | 73413662 ~ 73414721 (+) |
G182124 | NA | non-coding | downstream | 211075 | 73573605 ~ 73573921 (+) |
G182037 | NA | non-coding | downstream | 224574 | 73587104 ~ 73587665 (+) |
G182154 | LOC108230026 | non-coding | downstream | 273097 | 73635627 ~ 73636093 (+) |
G181995 | NA | other | upstream | 19032 | 73341380 ~ 73342277 (+) |
LOC110533853 | LOC106561194 | other | upstream | 1107582 | 72250884 ~ 72253809 (+) |
LOC110495604 | LOC106573778 | other | upstream | 1296114 | 72059717 ~ 72065199 (+) |
igf1ra | igf1r | other | upstream | 2553405 | 70794530 ~ 70905277 (+) |
G177812 | NA | other | upstream | 3247869 | 70107286 ~ 70113440 (+) |
G182139 | LOC106561173 | other | downstream | 244362 | 73606892 ~ 73610237 (+) |
G182144 | NA | other | downstream | 260006 | 73622536 ~ 73624518 (+) |
G183361 | NA | other | downstream | 1167119 | 74529649 ~ 74535026 (+) |
LOC110496107 | LOC106561202 | other | downstream | 1349051 | 74660359 ~ 74732682 (+) |