alpk3a (LOC106561166)


Basic Information

Item Value
gene id alpk3a
gene name LOC106561166
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 73418615 ~ 73440795 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571322.2
CCTTGCTTGGTCAACTATGATAGTGTATAATGGTCTGATATCTCTTGTGATATTTATTTGACATACTTTCTTCCAATTTGAAATATATAGATTTTTCCTCAGACATTACCTTTAGCCTTCTCTTGTTGAATATATGTCTGAAGGCTAGCTTGGGAAAATGTGATGTGCACTTGCAGCTATTTGTAGGCCTGCTATAAATAGTGTCCTGATGGCACCACAAGCACGCCTATGATTGACAATTGCATTCAGAGTTTTGCTGCTGGGAATCAGGCTCCAAAGGACACTGAAAAGCCTATAAATGCAACTCTTACATCGGTAAGACACTGCAACTTGAAACTGGGGCTTTGATCCATGCCAAGCTGAGCATTTTTTACTCAAGGACCAGTCTTCGGTAGTAGACACTTTTCCTTTATATTTGTGGGAATATCTGTTGAGTGGACAATGACTTCCAGAAGACCACTGACCCGTTCTTACTCTGGCAATGGGAGGACCGGCGGCAGCTACAATGAGGAGGAGGTCAGCTCTTCGAATGGCCGCTTGGAGAGCTGCAACTACCTCTCCAATGTCAGGCCCGGAAACAGGAGTACATTGTTCGGTGTGATGGCTCAGCTGACTGAGGACACCCAGCCTGTATTTGAGACCACCTTAAAATCCAAGGCCGTGTCAGAGAACTGTAATGTGAAGCTGACATGTGTGGTTACAGGAAACCCAGCCCCAGAACTGACGTGGTACAGAGACGACATGGAGTTGGACCGATACTGCGGTCTTCCAAAATATGAAATTGGCCGCaatggaaaaacacacacactccaaattTACAACTGCACAGTGGATGATGCAGCCATCTATCAGGCTTCAGCCAGGAACAGCAAAGGCATTGTCTCCTGCTCTGGGGTTCTGGAGGTGGGCACCATGAGTGAGTTCAAGATCCACCAGAGGTTTTTTGGCAAGCtgaaagagaaggcagagaacAAGAAGAGGGAGTTGGAAGAGAGCAGGAGAAGGGGAAATGAGAATGTCCAGAAGGATCCTCAGGAACAGAAGCCTCTCCAGAACAGCCCGATCGCCCCTCAGAGGAAGCGCCGGACCCCAagtgccctctcttcaccaccgAATGGGGAGGAGAACACAGTCAGCCAGGGGGCAGTGGCTGTAGAACCTAATGGGGCCAGTGCTGAAGTCAGTGAACCGGCCCCAGTGACGACTACAGAGAATGGGAGCAAGACTCCCAACAATGACTTTGACAATGTGGAGATTGTCACCACCAAGCCCCCAACCACAGAAATATTTGCCAAAAAAAAGATGAAGATCTCAAATGGTATAGATTCTGGGGTTGTCAGCAGTAACAGTAGTCATACAGGACCGGGCACCAGTGAAAATGCATATGATGGAGGAATAAGTTTGGCTCAATTTCTGTCAGAGACCCTTCATTCACAGACTGCTGAAGAAAATAAGATCCCTGCACAAGTGGAGGAAACTGTGGCAATGGAGGCAATGGATACTACTACTACAGATCCTAAAACAAATGCAgaaaaacagaaagaaagagaggagaaggggagagagagggcagaaagaggaagggcggagagagagaggatgcttGGAGAAGAACAGGAAAGAGAGAAAATGTCaattgagagagcaagagaggcagagcagttgcaaAGGACAACAGGACATAACAACACTGCCTCAGAGGTCAGAATGGAGGCTAAGACGCATGTCCATAAGGAGGGAGATCCTCAAGATTACCACCACATTCAGGAAACACTTTCCAATGTGCTCCACTCAGTCAAATACTTTTTCTTTGGTAAGAGTAAGAAGGATCATGCTTCTTCTGATCATCATGTGAAAGGTCAGGAGAAGGACAGAGGTCATCCAGTTGCCCCAACACAGCCGTACCCTAGCCCTCCCCCTCCACAGGAGCCAGATGGTCACCCAGAGGTGTATAAAACCCCCACAGAGGAGACAGTGCCCATGGTGGTAGTAGCACCAAAAACTAACGTACCACACAAGCAGCTAGCGTCATTTGAGAGGTTGAACCCAGCTGAACACAAGCATGGATTTACTGTTTCACACTCAGAAGAACCCCCGCCAGCTCCCAGAAGAGCACCAGAGAGTGTGCCTGATTCACTGGAGCATGTTGAGCAGAAGGAGGTATGTCCGGAGGTGATGATCAGCAGCAGTACAGAGACAGTGCCCACATCTGGCCCTCCAGCCCTCAGTGAGGCAACTGTGGACCAGATCCAGGCAGACCCTGTCCCCCATGTGATTGTCTCAGCCCCACATGAGCCAAACATCCAAGTGTTTTCTTCCGGGACTGATCAGGTGACAAGACATGATGCCAAAACTGAAGATTTACACAAACAGGGTCCATCTGACACTCCATGGAGCCCAGACCCCAGCAGTGGAGCAAGTTCCCATATGTCAAACCGCACTAGTGTGGGTGAAAGCGGGAGTGCTCCTAACAATAATGTCTCACCCACAGTCAACCTCGGCCTGATGACAGTAACCacagaaagtgagaaagagaaggtAATACATGTGGATGAGAAGGGCATTGGAAGTGTCTATGAGACACAAAATAAATGTTATTGTGCTtttgaggagaaaggagagaaaggtgaTGTCAAAGCAGAGAATCAACCATGTCCCACTTTAAATGTGAGTgttttagaggagaggagagagaagatacaTAACAAGGAGATCCATTTCAAAAGTTTGCTCCCAGAGAGTTCAGAGAATGATGGTCAAAATACACCAGAGGAATGCCCTCCTGTGGCAGGGGGGGACCAATATCTCAACATAAAAGAGAATTCTACCTTAGCTTTGGAGGAAAGCCTTGAAAGTGCCTTAAAAGTGGAATATACTCCTGCTTTGGAGAAAACTTTTGTGGACAGTTCATTTGGCAACCTGAAGATACAAGAACAGGTGGTACCTATTGTGCAGAAAATGTCTGAGCAAAAGGATGTGAACTTAGAGAGAAACGAAGTGCTGACCCGCACAATTGAGAGACATGTTGAAACAGAAGAAAAGGTGACTGAAATAAAGGTGGAAGTGCTGGGTGAATCTAAGATCCACTCAGAGACCCAGCCTGTGAAAGGCTCTGCCATTGTGTCCCCTGTGCCACCAGTGTCAGCATCAGTTACCAGTCCAGAGGCTAATTCCACTCATCTGGGTGGATACTTTGGAAATGTACCACAGATTAGAATGGTAGATTCTGCTCTTAGAATCCCAGAAATCAAAATAATTGTGCCAGAACAACAGATAAAAGAAGAGCAAATGATTATACCAAATATAGAGATTATGGAAGCAGAAGTCAAAGAGCCTACACAGCCATTGATACCTATTACACCCAATGAACCTTCATCAGAGACAGACATTTTCCAAAAGGATGTTGCAAATGATGTGTCAGGCATAATGATAGCAGAAAACAGCTCAGCTTTTACCCCAGTGGTTATAGATGTGACACCCACTCAAGAAAGTATGTGGAATGATGAAATCATCCGACCAACAGAGAAATTGCAGGAAGTTCCACAACCAGTTGAAGAGGCAAAAACACCTACGGCAGAGCAGTCAACTAACATAAAGAATGAGTGGCTCACAAAGACGTTAATTCCTGCAATAAATGTTTCCTATACTGATGACAGTAAACTCAGGAAAATAGATCATGAATATCCACATGTCAAGCCCCCCGTCTTAGATAGAGGAAAGCCAAAGGAAGCACCCAGTGTGCCTCTGCGTGTGGTCCCTCCTATTTCTGAAAGCAAGGAGCTTCCTAAAAATGAGAATAAAGAATCAGAATCATTGGCAGATATGCTCAGGGGGGTCAAGAGTGATTTTGAAAATGTTACTTCCTATAAGTCTGACAAAACCCATAGTGAGCCACAGAAACAGACTATAGAAACAAAGGAACAGAGTATGATAGACAACATCCTCTCTGTGTCATATAAAGCCTTAATGCCAACAGAAGtaacaacaatgcaaaaagcTGTGGACATCAGTTTTACTGAAACTGAAAAAGTAAAACCACTCAAAGAGTCAAGGATAGAGTCTTACATCATTGGCGATGAACCAAGAGAAAGAAACCCTATTGAAAGGCTTGCTGTCAAACCCCCAACACCCCCCAGGAGTCCCAGCAGTCTCCGCAGGCTCACGTCAAGGACTCCCCCTGCCATTACTGTGGATGACCCTCTTAACAGTGAGAAGGCAGTATCGGAGCAGAGTGTTGGAGACACCCCAACGTCCTCCCTGTCCTGTGAGAGCAGCCCCAGGCTGAAAAGAAGGGACAGTCTGACCCTCATCCGCTCTGCCACGCCCGAAGAGCTGGCCTCTGGAGCTCGCCGCAAGATCTTCATCcccagggagggagaaggggttgGGGTAGTGGTGGCACTGGGTGTGGGTGGTAGTCCGCTGGACACCCAGGTCAAAAAGGAGGCTCCATATATGTCACCCAGTCAGGCTCGCAGGGCAGCATTCCTGCAGGCCCCAGCAGGCTCACAGACCCCACCGCTGGAGAGACGGTCCCCTCTTTTGAGCCGTAGGAAGGCCACCCTGGAGGTGCCCAAAGTTGTGGAAGAGATCAGCACTGAGGAGCCAGAGAGCCCCAAGACTGAGGTCAAACCTCCTGAGAAGGAGAAGCAGAACCCCTTCAAAGctcctcaggTTATCCGTAAGATCAGGGGAGAGCCTTTCCCAGATGCCTCAGGACACTTGAAGCTCTGGTGCCAGTTCTTCAACGTGCTCAGTGACTCCACCATCAAGTGGTACAGGGACGAGGAAGAGATAGTAGAGGTGAAAAGAAGTGGAGGAGATGAAAGCCAAGTGGCGCTGGCCATCGTCCAGACATCCAGTCGAGATTGTGGAGTGTATGGCTGCTCAATCAAGAACGAATTTGGGACAGATTCCACTGACTTCCTTCTCAGCGTAGACCTACTTTCAGAGTACTTCCTGCGGGAGGATTTAGAAGTTGGAGAAGAGATGGAAATGACTCCAATGCTATTCACCAAAGGCCTAGCAGACCCGGGCTACTGGGGGGAGAAGTTCTTTGGGCGCATCATGACACAGGAGGCCCACCTGGGAGAGGGCTGTGCACATAAGGCCTGCAGGGTGAAGGTTATCTATGGCCTAGACCCTGTGTTTGAGTCCGGAACCACCTGTATCATTAAATTACAAAGCCCCATCGCCTATGGGACCAAACAGGAGAGCAACCTTGCAGAGAAAAACATGGAAATTACTAAGCAAgagtgCAAAATCCAAAACACAGTTCGAGAGTATTGCAAAATCTTTGCAGCTGAGGCGAGGGTGATTGAAAACTTTGGCTTTTCACTGGAAGTGATCCCTCTCTATCTGGTGTACCGCCCTGCCAACTCTGTCCCTTACGCCACTGTGGAGGCTGACCTGAAGGGCATCTTCCTTAAGTACTGTATGATGGATGCCAAAGGCAGGCTGATCACCAGAGCCACCTCAGAGGTGGAAATGAAATGCTGCTCCTTCCAGCATTGGATCCACCAATGGACAAACGGCAACTTACTGGTTACTGGGCTGGAGGGTGTTGGACCGAAGATCACTAAAGTTAGAATTGTCACGAAATCAAAGGGGTATCAAGGCCTTACAGATGATGGTTATCCTAAGGTGTTTGAGCAGTTCCTGACCCAGCATCAGTGTAACTACTACTGTGGGCTCCTCAGCCTGAGAACTCTGAAGCCCATGGACACCCTGCAGCAGCCCCCCAAGATCAAAGGCTCCCGGAGCCCCTTGCTCGGCAGGAAGTTAGGCTCGTCCAGCCCTCAGCACAATAGGAAGTTGGGCTCATCCAGCCCCCAGCTGCAAAGAAAAGGACTGAACAGCCCCTTGACAACCAGAAAGGCCACCTCCAGCCCAAAGGTGCCTAGAAAGACTAgggagacagaagacaaccaGTCCACAGCCAAACCCAAGGCGGAGGAGAGTATCAAAGTTGTGGTATGAGGTAGCAACGTCCAAAGGGAATACATATCAAAGCAGCTTCCCTTTTCTTTCACGCCAACGTTCAGCTTTTTTATGTTTTCCTGTCACCCATTGCTGTATTTAGTTGGGTTGAAGCAAGGACGACCAGCATGGCCTTGAACAAAATGTTACAGAGCTTGTGCCTGAAAAGTCTTCATCCAAGAAGGAGAGACAAACAGGGAGATGAGTTCAAATCTAGGGAATAGGTCACCCTAGGGGATATTTATATAACATTACTGTGAATTTCTCAATAACCATCAGTAGTAGTGAGATACTCCCCATTCTCCAGCTTTATGCTGAAATGGTTTAAGTGAGTGGAGGAGGTACAGGACCTTTAAGAAAACTTCCAGCACTAAGGAAATGGGACACAGTTTTCTCTCACATCCAGTACAGTCCTCTTCAAAAGAAGAGacttgtgaagtggttgaaacaATGGTGCTGGATACAAAGCCGTGGCCGTAAGCAGAGCTCTAATAGCTTGATGCAGATGCAAGGGTAGTGAAGTGCACCAACTGCATTGTACATCTGGGATGTATAAGTCTTGGTCATTGAAATTGTTTTTGTTGAACAGTAATTGGATCTTGTTACTGTTGGTCGTATAGCATGCTCTACTTGTTTCTATTATGGCATTATTATGTCCTTAAACTACGCATTACAGTCTTCCGAACACTGAGCAAAGACAACACTACTCTTGCCTCTTCACTGGGAATATGTTTTTGTGCACTTTTTTTGCCAAATGTTTTCTTGCCTTTTGAAAACTGCCAGGTTTTAGTAGTTCAGTTCATTTTTGTTGAACTTTGTTCAAATCCTGTAATCTGTTCATTGGAAATGAACATGTTCACATGCTTAAGTCTGTACACCGATCCCCTTAACCTGGTTCTTTAAaggaacagtacagtacaccgaTCCCCTTAACCTGGTTCTTTAAaggaatagtacagtagaccGATCCCCTTAACCTGGTTCTTTAAaggaatagtacagtagaccGATCCCCTTAACCTGGTTCTTTAAaggaacagtacagtacaccgaTCCCCTTAACCTGGTTCTTCAAaggaacagtacagtacaccgaTCCCCTTAACCTGGTTCTTTAAaggaacagtacagtacaccgaTCCCCTTAACCTGGTTCTTTAAaggaatagtacagtagaccGATCCCCTTAACCTGGTTCTTTAAaggaacagtacagtagaccgATCCCCTTAACCTGGTTCTTTAAAGGAATAGTACAGTACACCGATCCCCTTAACCTGGTTCTTTAAaggaacagtacagtacaccgaTCCCCTTAACCTGGTTCTTCAAaggaacagtacagtacaccgaTCCCCTTAACCTGGTTCTTTAAaggaatagtacagtagaccGATCCCCTTAACCTGGTTCTTTAAAGGAACAGTACAATAGACCGATCCCCTTAACCTGGTTCTTTAAAGGAATAGTACAGTACACCGATCCCCTTAACCTGGTTCTTTAAaggaacagtacagtacaccgaTCCCCTTAACCTGGTTCTTCAAaggaacagtacagtacaccgaTCCCCTTAACCTGGTTCTTTAAaggaacagtacagtacaccgaTCCCCTTAACCTGGTTCTTCAAaggaacagtacagtacaccgaTCCCCTTAACCTGGTTCTTCAAAGGATTGACTCTTTAACTGACCTTGAGTGTTGAAGAGCAATAAAGGGATTACTGAAATAAACACTTTAACTTTGGAATGCACATGTTTGGTGCCATTTAAATGGGTCAACTCACAAAGTGAAAGAATAAGAGCTATAATATCAGAACCATGTAGAAACTGCTTTGGACCTGGCCCATGATCACAGTAAAGCAGTAGCTCACCTCCAGCTGACTTTTGTGACTGAAAATGATATGCATTCTCAACATTCACACTTCTGGGGGAGGGGTGGGATGGGGATATTGTCACTAGTTTGAAGCGTacagtatgtgaatgtgtgtgtgagtgtgtgagtgagagcgtGCAAGAGGGATTAAGAGTGTTTGATATGTTGGCAGAATGCTAATGAAATGAATGTCCCTGACACTGTAATATCTGGTATGTTATGTTGTGATTTTGTACATACAATTCATGTCAAACGTTCATATTCATATTTTCACATACTGTTTATTTAGATACAATGCAGAATTTGACTTACTGATTTACTCACTGCAAATAATCCACTCTTACAATTTCCAATCCTTATTTAGCACATTTCCGCATTTCTTTGCATTGATTTCCAATATATCTGTTCTCTGACTCTTTGAATGAAAGAGTGAATCTTTAGAACTAAAGAACTATATTTATCATAAATAAAATTGTAAAAACCCG

Function

NR:

description
alpha-protein kinase 3-like

GO: NA

KEGG:

id description
K08868 ALPK; alpha-kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571322.2 True 8344 mRNA 0.46 14 73418615 73440795

Neighbor

gene id symbol gene type direction distance location
znf592 znf592 coding downstream 33018 73378175 ~ 73385597 (-)
kti12 kti12 coding downstream 44937 73365566 ~ 73373678 (-)
LOC100653450 LOC106561160 coding downstream 89737 73324175 ~ 73328878 (-)
scaper LOC106561156 coding downstream 125796 73176721 ~ 73292819 (-)
etfa LOC100194695 coding downstream 261304 73146221 ~ 73157311 (-)
blm blm coding upstream 139101 73579896 ~ 73605873 (-)
ctsh LOC106561173 coding upstream 166094 73606889 ~ 73610117 (-)
rasgrf1 LOC106561174 coding upstream 169479 73610274 ~ 73646136 (-)
si:ch211-107o10.3 LOC106561176 coding upstream 298387 73739182 ~ 73749958 (-)
LOC110495933 zn710 coding upstream 327789 73768584 ~ 73775448 (-)
G182734 LOC106561167 non-coding downstream 7654 73408766 ~ 73410961 (-)
G182648 NA non-coding downstream 152917 73233202 ~ 73265698 (-)
G182553 NA non-coding downstream 304735 73107475 ~ 73113880 (-)
G182554 NA non-coding downstream 305170 73107133 ~ 73113445 (-)
G182552 NA non-coding downstream 305274 73107045 ~ 73113341 (-)
G182820 NA non-coding upstream 121120 73561915 ~ 73562219 (-)
G182821 NA non-coding upstream 122137 73562932 ~ 73563178 (-)
G182824 NA non-coding upstream 124487 73565282 ~ 73565492 (-)
G182826 NA non-coding upstream 126214 73567009 ~ 73567506 (-)
G182829 NA non-coding upstream 129407 73570202 ~ 73570423 (-)
G182708 NA other downstream 72768 73344950 ~ 73345847 (-)
LOC110495704 nrg4 other downstream 340236 73076020 ~ 73078379 (-)
G182494 NA other downstream 351891 73011478 ~ 73066724 (-)
c2cd4a LOC106561196 other downstream 544870 72833292 ~ 72877678 (-)
G180716 NA other downstream 1306952 72110968 ~ 72111663 (-)
G182882 NA other upstream 235417 73676212 ~ 73676423 (-)
G183096 NA other upstream 552283 73993078 ~ 73993545 (-)
G183538 NA other upstream 666088 74106883 ~ 74110791 (-)
G184006 LOC106561202 other upstream 1290077 74730872 ~ 74732637 (-)
LOC110496186 LOC106561212 other upstream 2165432 75595366 ~ 75607735 (-)

Expression


Co-expression Network