idh2 (LOC100194640)


Basic Information

Item Value
gene id idh2
gene name LOC100194640
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 73756972 ~ 73768531 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571480.2
GAAAATCATAAATACCCAATGCGGATTGGGATGGTTAGTTAGaagtccctccctcctctattgtCTTTGACTGTGTGACGTAACGTCAAGCGTGGGTGGGGTGGTGCTGACTATATTGCAGTGAGCGGGGGTTCATTTCGGCCCTTCTTTGCTCGGAGTTTCACGGTTATTAAGCTGCAAGTAATTTAGGCAAATCATGGCTGGGTACTTGAAggtcctccgctctctctctagGTCGGCGACCACTCTCTCCAAAAACCCCGCTGTGCTCGCGCCAGCTGCAACCTCCCAGAGTTTGCAACAGAGGAATTATGGGGACAAACGTATCAAGGTGTCCCAGCCTGTGGTGGAAATGGACGGAGATGAGATGACTAGGATCATCTGGGAGTTCATCAAAGAGAAGCTTATCCTCTCCAACGTGGATGTGGAGCTGATGTACTACGACCTGGGTCTGCCATACCGTGATCAGACTGATGACCAGGTCACCATCGACTCTGCCATCGCCACCCAGAAGTACCATGTCGCTGTTAAATGTGCCACAATCACTCCCGATGAGCAAAGAGTAGAAGAGTTCAAACTGAAGAAGATGTGGAAGAGTCCCAACGGAACCATCAGGAACATCCTAGGTGGCACAGTCTTCCGTGAGCCAATCATCTGCAAGAACATTCCCAGGCTTGTTCCAGGTTGGACACAGCCCATCACCATTGGCAGACATGCCTTTGGTGACCAGtacagagctacagACTTTGTTATCAGCCAGCCAGGCACATTCAAGATGGTCTTCTCCCCTACTGATGGGAGCAAAGGCCAGGAGTGGGAGGTCTACAAGTTTCCTGGCGGTGGCTGTGGAATGGGCATGTACAACACAGATGAGTCTATTTCAGGCTTTGCGCACAGCTGCTTTCAGTACGCCATTGGCAAGAAGTGGCCCCTCTACCTAAGTACCAAGAACACCATTCTCAAAGCCTACGATGGTAGATTCAAGGACATCTTTGAGGAAATCTACCAGGCGAATTACAAACCAGAGTTTGACAAGCTGAAGATCTGGTACGAGCACAGGCTCATTGATGACATGGTTGCCCAGGTGCTGAAGTCTGATGGTGCCTTTGTGTGGGCCTGCAAGAACTACGATGGAGACGTACAGTCTGACATCCTGGCTCAGGGTTTCGGCTCTCTGGGTCTGATGACGTCAGTGCTGGTGTGTCCCGATGGCAAGACTATTGAGGCAGAGGCAGCCCATGGCACAGTGACCAGGCACTACCGCGAGCACCAAAAGGGAAACCCAACAAGCACCAACCCCATTGCCAGCATCTTTGCTTGGACCAGAGGGCTTGAGCACCGGGGTAAACTTGATGGCAACCCTGACCTGATCAAGTTCGCTCTGACTCTGGAGCGGGTGTGTGTGGAGACTGTTGAGAGTGGCGTTATGACTAAGGACCTCGCTGGCTGCATTCACGGCCTTTCCAAATGCAAGCTGAATGAACACTACGTCAACACTGAGGACTTCCTGGACGCCATCAAGAATAACCTGGACAGAGCCCTGGGCAAGTGAAGGACTGAAGAGTGCAACTAGCCTGAATGTGACATTGTCCTGTTTTTGTACCTAATTGTTAACTTCGGTCATACATGCATATTGTCTGAAGAAAGAAGTAATATGTAGTGTGTCAGATTGTACTGTTGATCTGTTCCATCTAGCACTCCTGTCCCTATTTCCAGGGTTCTATTTTTGTAAAGAAGTACTATATTCCGATACTGTATTATGCCTTCAAAGCAACATGAAGGCCATGTCAAGAATATTTGCTAATACATCTTGTTTGATCTTA

Function

NR:

description
isocitrate dehydrogenase [NADP], mitochondrial

GO:

id name namespace
GO:0006099 tricarboxylic acid cycle biological_process
GO:0006102 isocitrate metabolic process biological_process
GO:0051287 NAD binding molecular_function
GO:0004450 isocitrate dehydrogenase (NADP+) activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K00031 IDH1, IDH2, icd; isocitrate dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571480.2 True 1823 mRNA 0.49 11 73756972 73768531

Neighbor

gene id symbol gene type direction distance location
LOC110495913 ankrd34c coding upstream 19243 73733395 ~ 73737729 (+)
LOC110501876 LOC106561170 coding upstream 178792 73456669 ~ 73580075 (+)
trnah-gug-2 NA coding upstream 301469 73455432 ~ 73455503 (+)
malt3 LOC106561168 coding upstream 302110 73436134 ~ 73454862 (+)
slc28a1 LOC106561167 coding upstream 338134 73409052 ~ 73418838 (+)
LOC110495946 LOC106561177 coding downstream 115020 73883551 ~ 73984737 (+)
LOC110495967 LOC106573468 coding downstream 230738 73999269 ~ 74010559 (+)
LOC110495989 LOC106573469 coding downstream 301433 74069964 ~ 74110824 (+)
LOC110495996 LOC106561183 coding downstream 357692 74126223 ~ 74139502 (+)
LOC110496029 LOC106561185 coding downstream 409952 74178483 ~ 74198686 (+)
G182155 LOC106573487 non-coding upstream 119984 73636550 ~ 73636988 (+)
G182154 LOC108230026 non-coding upstream 120879 73635627 ~ 73636093 (+)
G182037 NA non-coding upstream 169307 73587104 ~ 73587665 (+)
G182124 NA non-coding upstream 183051 73573605 ~ 73573921 (+)
G183089 NA non-coding downstream 222006 73990537 ~ 73991061 (+)
G183091 NA non-coding downstream 222834 73991365 ~ 73991640 (+)
G183099 NA non-coding downstream 226624 73995155 ~ 73995604 (+)
G183100 NA non-coding downstream 227151 73995682 ~ 73995943 (+)
G182144 NA other upstream 132454 73622536 ~ 73624518 (+)
G182139 LOC106561173 other upstream 146735 73606892 ~ 73610237 (+)
G181995 NA other upstream 414695 73341380 ~ 73342277 (+)
LOC110533853 LOC106561194 other upstream 1503245 72250884 ~ 72253809 (+)
G183361 NA other downstream 761118 74529649 ~ 74535026 (+)
LOC110496107 LOC106561202 other downstream 943050 74660359 ~ 74732682 (+)
LOC110496116 LOC106561204 other downstream 1117567 74828267 ~ 74890826 (+)
LOC110496136 LOC106561223 other downstream 1268721 74991655 ~ 75145608 (+)
LOC110496459 LOC106561246 other downstream 2399126 76167573 ~ 76181555 (+)

Expression


Co-expression Network