XLOC_020691


Basic Information

Item Value
gene id XLOC_020691
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 1266991 ~ 1290856 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042244
CTGGACTGTCTTATGTTACCCATATTCAAATCCTGCTAATTCAAAGAGAGAAACAAAGCAAGAAGAGACTAATTGATGGCACATACAGAAGGAAGAGGGGAGGGTACCGCTTCCAGACCCAGAATCATCAGTCAACAACTTCTTAATATTCTGATCACCATCAGGCAACCATTGATTTGCTGTGTTATCAAAAGAAATAATGTATCTTATAttttaaccctgctgaaaaatccagcttaaaccagcctaggctggttggctggttttagctggttgaccagcctggttttagaggggttttggccgtttccagccatttccagcctggtcttagctgagatgaccagctaaaagtcacaaggcgttaaacgttgacggaaaacgcgagcaaaaaatgtCTCGGTGTGCACAGACCTTTACTCTGCTGAAATCAATACAATATATGTTTGTATCCTGGTTTATGCAGTAATCATGAAGAAGCAAATAATCAAGAGGAATCCACACATCTGCAGCACCAGTGTTTTCTGATGTGAAACACTCGTTACACACGAGAAACTGTTTTGCTGCATTGATGTCACGTGTgctgcttttctccagtgtggattttcatgtgtttCTGAAGATGCGACCACCGTGTGTAACTCTTCAGACACTGATCAcacgtgtacggtttctctccagtgtgaatcctctcatgtgcgTTCAGGGTTCCCGACTGTCTGaagctcttgtcgcagtgtgaacacctgtacggtttctctccagtgtgaatcatctggTGCCGTTTCAAATATTCAGCTCTAATAAAAGTCTTCTGACACTCAAagcacacaaactctctcacaccagtgtggatcttctgatgctGTTTCAACAAACCAGCTgtgataaaagtcttctcacactgaCAGCACACGTACTCTTtcactccagtgtggatcttctgatggtCTTTTAAACTTGACTGACgtccaaaactcttcccacactcagagCATGAATACGGTTTCTCTTTTGTATGAACTCTAAGATGGATCTTCAGGTCTGCAGCCCTCAAAAACGTTTTGTCGCATCGATCACATGTGtgtggtctctctccagtgtggatcatcatgtgctCATTAAAGTGTGTTGATCtactgaaactcttcccgcactgagtgcatgtgaacggtttctctccagtgtggatcagcatGTGTTTTTTGAAGTTTGATAaatgtctgaaactcttcccacactgagtgcatgtgtacgGTTTCCctccagtgtggatcagcatGTGTGATTTAAGCGCTGATgattgtctgaaactcttccctgtggatgcGCATGTGTATTTTAAGCGCTGATgattgtctgaaactcttcccacactgagtgcatgtgtacggcttctctccagtgtgaatcctcatgtgaaaCTGGAAACTTGGTTTGCATcccaaactcttcccacactcagtgcAGGTGAAACACTTCTTGTCTTTTcctttcattattaaaaataccTTTAGTCAATAAATGAGGGATTTTCTCAGCTTTTGCAAGTCCATCATCTTCTCTCTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042244 True 1569 lncRNA 0.43 2 1266991 1290856

Neighbor

gene id symbol gene type direction distance location
XLOC_020688 ampd2a coding downstream 21765 1205787 ~ 1245226 (-)
XLOC_020689 CU570769.4 coding downstream 36969 1229906 ~ 1230022 (-)
XLOC_020687 NA coding downstream 84512 1182084 ~ 1182479 (-)
XLOC_020686 NA coding downstream 98700 1156430 ~ 1168291 (-)
XLOC_020685 si:ch1073-15f12.3 coding downstream 187218 1073413 ~ 1079773 (-)
XLOC_020692 NA coding upstream 24872 1315728 ~ 1316773 (-)
XLOC_020693 BX322657.4 coding upstream 30135 1320991 ~ 1359856 (-)
XLOC_020694 NA coding upstream 72484 1363340 ~ 1365341 (-)
XLOC_020695 NA coding upstream 149822 1440678 ~ 1457344 (-)
XLOC_020696 NA coding upstream 159002 1449858 ~ 1453031 (-)
XLOC_020684 NA non-coding downstream 243460 1018345 ~ 1023531 (-)
XLOC_020676 NA non-coding downstream 506105 739300 ~ 760886 (-)
XLOC_020697 NA non-coding upstream 190627 1481483 ~ 1589655 (-)

Expression


Co-expression Network