LOC110495986 (LOC106561179)


Basic Information

Item Value
gene id LOC110495986
gene name LOC106561179
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74018519 ~ 74067110 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571562.2
TTCGGTTTTCATAAAAACTACAGACCGTTGCTAATGGATGAAGGCACCTCTCAGCCGTAACTAGACCGAACGACTGCTTCCACACTACAGAATCAACCGGCCAGGCAGGCATCGTGGGGATAGATAGGCTGGAGGAAGATCATCTCTCTTGGAGGCCTTTACAGATGGTGTCCATTGCTCCCGGTAGTGAGATGGAGACAGAGCCCTGCCCTGGAGAGCAAGAGAAGCGGGTTGTGGAGACCAATGAGCCAGAGTTGAAGGAGGCCTACACAGGTCCTGGTGACAAGGACAGTCAGAAAGAGAAGGAACTGTCCCATGGGCCTCAGCAGGAAGATACGGAGCCCCATGGGGAGGGAGACCCCAGGACAGAATGCCAGGGTGGAGGTAATGCTGGCACTACATTAAACACCCTCTCTGTCCCAGAGAAGACAGAGACCCCCTGTGTGGAAGAGAGGAAGCTGAAGAAGACCCCCAGTTTTGCAAAAACAGTGAGGTTCTGCGAGACACAGTCtgtggaggacagggagagctcagAGGAGAGTCTCTTCCCAGACCATGAGATGGTGCAGTGGATCTCCTCCAGCTTTGAGGAGCTGTTCCTGGCTGAAGACTGGGAGGACATCACAGATGACCGCCTGTTGAGGAAGAAGGTGCTGGCGCCTGGCCCCCAGAAAGCTGAGCACCCAGCCTGGGGTCAGGAGGTCACAGTCAAAATGCAGGGAGTGCTGGAGGATCGGAGTGTGGTGGAGAAAGACCGTAAACTGGTGTTCGTCATCGGAGAGGGAGATGTCAACCAGGCCCTGGAGGAGTGTGCTATGGCCATGCAACAGGACGAGATCACATTACTGCTGGCAGATTCACAGTACACCTATGGACTTCTGGGAAGGGAGCCTGATATTCCAGCCTGGGCCCCCTTACTCTACCAGCTACAACTCCTGAACATCAGAGAGAAGCCCGACCCCCTGATTCTCCCCATGTCTGACCGTATACGCATCGGCAACCAGAAACGAGAGCGGGGGAACTTCCACTTCCAGAGGGAGGAGTACAGCATGGCTACCAGGGCCTACTGGATGGCTCTGGATGTCCTTACTACACACACTAAAGATGGTGGAAATGCTGTgctggtggagggggaggaggtgcaGGACTACCGGGTGAAGTGTCTCAACAACCTGGCAGCGGCTCAGCTGAAACTGGAGCAGTACGACGACGCACTACACACCAGCCGGGATGTTTTGTCCCTGGACCCACAAAATGTCAAAGCCCTCTTCAGAACAGGAAAGCTTCTGTCAGACAAGAGCGAATACGGGGAGGCCATGGAGATACTGAAGAAGGCTCTGAAACTGGAGCCGTCCACCAAGGCCATCCATGTTGAGCTGTCAAAGCTAGTGAAAAGGCAATCAGGAGGCAAAAACACCCAGAAGTGGCAAGCCAAACCTGCCCAGCTCCTTGGAGACAATATTGCCCCATTTCTGACTCCTAACAAGAAGCCACCTGGAATTTCATGGAAGTTCCTGCTTGGTGCTCTGGTGGTGGCCTTGGGCAGTTTAGTGACGTCAGTGGTTCTGACTGCAAGAAACTGACGTCTTCTGCAAAGGAACTGTCCAGCACATGAATAGTAAAGTGACGTGTGTCTGCTGTgaataataaataaaacactgCACTATG

Function

NR:

description
peptidyl-prolyl cis-trans isomerase FKBP8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571562.2 True 1668 mRNA 0.54 8 74018519 74067110
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110495977 NA coding downstream 4106 74010498 ~ 74014413 (-)
LOC110495933 zn710 coding downstream 243071 73768584 ~ 73775448 (-)
si:ch211-107o10.3 LOC106561176 coding downstream 268561 73739182 ~ 73749958 (-)
rasgrf1 LOC106561174 coding downstream 372383 73610274 ~ 73646136 (-)
ctsh LOC106561173 coding downstream 408402 73606889 ~ 73610117 (-)
LOC110501884 NA coding upstream 44868 74111978 ~ 74112847 (-)
LOC118941541 NA coding upstream 51956 74119058 ~ 74140876 (-)
LOC110496007 LOC106561184 coding upstream 55173 74122283 ~ 74126209 (-)
LOC110496015 LOC106561186 coding upstream 89963 74157073 ~ 74167350 (-)
LOC110501892 LOC106561189 coding upstream 174127 74241237 ~ 74433222 (-)
G183098 NA non-coding downstream 23518 73994721 ~ 73995001 (-)
G183092 NA non-coding downstream 26844 73991340 ~ 73991675 (-)
G183084 LOC106561177 non-coding downstream 31454 73981328 ~ 73987065 (-)
G182903 NA non-coding downstream 314427 73703765 ~ 73704092 (-)
G183602 NA non-coding upstream 73927 74141037 ~ 74143053 (-)
G183631 NA non-coding upstream 77475 74144585 ~ 74144786 (-)
G183672 LOC106561185 non-coding upstream 129762 74196872 ~ 74198670 (-)
G183601 LOC106561188 non-coding upstream 148207 74215317 ~ 74221649 (-)
G183096 NA other downstream 24974 73993078 ~ 73993545 (-)
G182882 NA other downstream 342096 73676212 ~ 73676423 (-)
G182708 NA other downstream 672672 73344950 ~ 73345847 (-)
LOC110495704 nrg4 other downstream 940140 73076020 ~ 73078379 (-)
G182494 NA other downstream 951795 73011478 ~ 73066724 (-)
G183538 NA other upstream 39773 74106883 ~ 74110791 (-)
G184006 LOC106561202 other upstream 663762 74730872 ~ 74732637 (-)
LOC110496186 LOC106561212 other upstream 1539117 75595366 ~ 75607735 (-)
G186002 NA other upstream 1810249 75877359 ~ 75878060 (-)
tnni1c LOC106561253 other upstream 1918049 75985156 ~ 75989573 (-)

Expression

LOC110495986(LOC106561179) Expression in all Baseline Samples

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LOC110495986(LOC106561179) Expression in each Bioproject

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LOC110495986(LOC106561179) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
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Co-expression Network