LOC118941541


Basic Information

Item Value
gene id LOC118941541
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74119058 ~ 74140876 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037845.1
acgcagagtagGGGGAGCATTGCAATGacagatgaggaggaggggagggttttTTCAAGGTATAAAAGGAGGTTACAATGTTTGATCTGTCCTTTTTATCCTGCGGAGCCCTCCGCTTAAGGATTTGGGACTGGTGACCCTCTGTCAGGTCACTATGAAGTTCCCACTCTGTTTGcttgctgtgtattttatttgaagaggaggagaggaggaggaggaggaaaggagatgaaAAGCCTGCTCCCAAGGGCAGGTCACTGGGTCCCTGGCCATGTCCTGGTAGGGGGTGTTGGGAGTCTGTCCCCTCGCAGGTACTGACTCTCAGCATGACCTCGCAGGACCCAGTCAGTCGGGCCTGGTGAGCAGAGCCAGGAGCTGCAGATCAGCTGATCCGCAGCGACCTTGACGCACCGACGAACCCAAGCACCAGACACCTGAAGACACCTGAGACGACTAGATGAAGCTCATCCGAAGCACAAAGCTTATACTACTTACCTGAATAATTAAACGAAATGTACCCTAGAATGCCGCCAGATGAAGAACCATTCTTTTCTTTTTTTGGTTGGCTTCTGGTTGTCTGCGTTGCTTGGTTTCGGCGGCTCATGGGGGGCCTGCTGAAGAAAACGCATTCCCAAATACACTACAATGCTGAACGCATAATTTCCATGAAAATGTAAAATTTtaaataaaaattgaaaaaaacatTGCAACATGAA
>TU208298
atgcaggCTGAGGGTGTTAGGTGCTTTCCTGTGGCTCTCAGCATTGCAATGacagatgaggaggaggggagggttttTTCAAGGTATAAAAGGAGGTTACAATGTTTGATCTGTCCTTTTTATCCTGCGGAGCCCTCCGCTTAAGGATTTGGGACTGGTGACCCTCTGTCAGGTCACTATGAAGTTCCCACTCTGTTTGcttgctgtgtattttatttgaagaggaggagaggaggaggaggaggaaaggagatgaaAAGCCTGCTCCCAAGGGCAGGTCACTGGGTCCCTGGCCATGTCCTGGTAGGGGGTGTTGGGAGTCTGTCCCCTCGCAGGTACTGACTCTCAGCATGACCTCGCAGGACCCAGTCAGTCGGGCCTGGTGAGCAGAGCCAGGAGCTGCAGATCAGCTGATCCGCAGCGACCTTGACGCACCGACGAACCCAAGCACCAGACACCTGAAGACACCTGAGACGACTAGATGAAGCTCATCCGAAGCACAAAGCTTATACTACTTACCTGAATAATTAAACGAAATGTACCCTAGAATGCCGCCAGATGAAGAACCATTCTTTTCTTTTTTTGGTTGGCTTCTGGTTGTCTGCGTTGCTTGGTTTCGGCGGCTCATGGGGGGCCTGCTGAAGAAAACGCATTCCCAAATACACTACAATGCTGAACGCATAATTTCCATGAAAATGTAAAATTTtaaataaaaattgaaaaaaacatTGCAACATGAACAAACTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037845.1 False 716 mRNA 0.49 5 74119066 74140876
TU208298 True 748 lncRNA 0.46 3 74119058 74120268

Neighbor

gene id symbol gene type direction distance location
LOC110501884 NA coding downstream 6219 74111978 ~ 74112847 (-)
LOC110495986 LOC106561179 coding downstream 51956 74018519 ~ 74067110 (-)
LOC110495977 NA coding downstream 104653 74010498 ~ 74014413 (-)
LOC110495933 zn710 coding downstream 343618 73768584 ~ 73775448 (-)
si:ch211-107o10.3 LOC106561176 coding downstream 369108 73739182 ~ 73749958 (-)
LOC110496015 LOC106561186 coding upstream 16197 74157073 ~ 74167350 (-)
LOC110501892 LOC106561189 coding upstream 100361 74241237 ~ 74433222 (-)
LOC110496063 LOC106561200 coding upstream 311656 74452532 ~ 74473316 (-)
LOC118937295 NA coding upstream 360538 74501414 ~ 74508105 (-)
LOC110496093 LOC106561201 coding upstream 392409 74533285 ~ 74594426 (-)
G183544 NA non-coding downstream 98970 74019259 ~ 74020096 (-)
G183098 NA non-coding downstream 124065 73994721 ~ 73995001 (-)
G183092 NA non-coding downstream 127391 73991340 ~ 73991675 (-)
G183084 LOC106561177 non-coding downstream 132001 73981328 ~ 73987065 (-)
G183602 NA non-coding upstream 161 74141037 ~ 74143053 (-)
G183631 NA non-coding upstream 3709 74144585 ~ 74144786 (-)
G183672 LOC106561185 non-coding upstream 55996 74196872 ~ 74198670 (-)
G183601 LOC106561188 non-coding upstream 74441 74215317 ~ 74221649 (-)
G183538 NA other downstream 8275 74106883 ~ 74110791 (-)
G183096 NA other downstream 125521 73993078 ~ 73993545 (-)
G182882 NA other downstream 442643 73676212 ~ 73676423 (-)
G182708 NA other downstream 773219 73344950 ~ 73345847 (-)
LOC110495704 nrg4 other downstream 1040687 73076020 ~ 73078379 (-)
G184006 LOC106561202 other upstream 589996 74730872 ~ 74732637 (-)
LOC110496186 LOC106561212 other upstream 1465351 75595366 ~ 75607735 (-)
G186002 NA other upstream 1736483 75877359 ~ 75878060 (-)
tnni1c LOC106561253 other upstream 1844283 75985156 ~ 75989573 (-)
adm2b adm2 other upstream 1952294 76093170 ~ 76099909 (-)
LOC110496007 LOC106561184 coding upstream 2015 74122283 ~ 74126209 (-)

Expression


Co-expression Network