Item | Value |
---|---|
gene id | LOC110496029 |
gene name | LOC106561185 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 74178483 ~ 74198686 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
uncharacterized protein LOC110496029 isoform X2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021571685.2 | False | 3547 | mRNA | 0.51 | 20 | 74178483 | 74198686 |
XM_021571668.2 | False | 3535 | mRNA | 0.51 | 21 | 74178578 | 74198686 |
XM_021571660.2 | False | 3878 | mRNA | 0.50 | 21 | 74179492 | 74198686 |
XM_021571676.2 | True | 4431 | mRNA | 0.49 | 20 | 74179492 | 74198686 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110495996 | LOC106561183 | coding | upstream | 38981 | 74126223 ~ 74139502 (+) |
LOC110495989 | LOC106573469 | coding | upstream | 67659 | 74069964 ~ 74110824 (+) |
LOC110495967 | LOC106573468 | coding | upstream | 167924 | 73999269 ~ 74010559 (+) |
LOC110495946 | LOC106561177 | coding | upstream | 193746 | 73883551 ~ 73984737 (+) |
idh2 | LOC100194640 | coding | upstream | 409952 | 73756972 ~ 73768531 (+) |
LOC110496053 | LOC106561188 | coding | downstream | 11777 | 74210463 ~ 74221530 (+) |
LOC110496089 | LOC105018423 | coding | downstream | 321090 | 74519776 ~ 74529599 (+) |
LOC110496107 | LOC106561202 | coding | downstream | 461673 | 74660359 ~ 74732682 (+) |
LOC110496116 | LOC106561204 | coding | downstream | 629581 | 74828267 ~ 74890826 (+) |
LOC110496126 | LOC106561207 | coding | downstream | 711781 | 74910467 ~ 74962990 (+) |
G183182 | NA | non-coding | upstream | 801 | 74173635 ~ 74177682 (+) |
G183176 | NA | non-coding | upstream | 22138 | 74155844 ~ 74156345 (+) |
G183175 | NA | non-coding | upstream | 22925 | 74155246 ~ 74155558 (+) |
G183168 | NA | non-coding | upstream | 36838 | 74141347 ~ 74141645 (+) |
G183152 | NA | non-coding | upstream | 48612 | 74060896 ~ 74129871 (+) |
G183226 | frmd4a | non-coding | downstream | 61687 | 74260373 ~ 74261170 (+) |
G183346 | NA | non-coding | downstream | 239727 | 74438413 ~ 74438688 (+) |
G183354 | NA | non-coding | downstream | 253852 | 74452538 ~ 74457151 (+) |
G184023 | NA | non-coding | downstream | 554680 | 74753366 ~ 74753628 (+) |
G182144 | NA | other | upstream | 553965 | 73622536 ~ 73624518 (+) |
G182139 | LOC106561173 | other | upstream | 568246 | 73606892 ~ 73610237 (+) |
LOC110501876 | LOC106561170 | other | upstream | 598408 | 73456669 ~ 73580075 (+) |
G181995 | NA | other | upstream | 836206 | 73341380 ~ 73342277 (+) |
LOC110533853 | LOC106561194 | other | upstream | 1924756 | 72250884 ~ 72253809 (+) |
G183361 | NA | other | downstream | 330963 | 74529649 ~ 74535026 (+) |
LOC110496136 | LOC106561223 | other | downstream | 838566 | 74991655 ~ 75145608 (+) |
LOC110496459 | LOC106561246 | other | downstream | 1968971 | 76167573 ~ 76181555 (+) |