Item | Value |
---|---|
gene id | LOC110496126 |
gene name | LOC106561207 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 74910467 ~ 74962990 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: semaphorin-3E-like isoform X2 |
id | description |
---|---|
K06840 | SEMA3; semaphorin 3 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036955513.1 | False | 6827 | mRNA | 0.47 | 17 | 74910467 | 74962990 |
XM_036955514.1 | False | 6824 | mRNA | 0.47 | 17 | 74910467 | 74962990 |
XM_036955515.1 | False | 6824 | mRNA | 0.47 | 17 | 74910467 | 74962990 |
XM_036955516.1 | True | 6821 | mRNA | 0.47 | 17 | 74910467 | 74962990 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110496116 | LOC106561204 | coding | upstream | 19641 | 74828267 ~ 74890826 (+) |
LOC110496107 | LOC106561202 | coding | upstream | 177785 | 74660359 ~ 74732682 (+) |
LOC110496089 | LOC105018423 | coding | upstream | 380868 | 74519776 ~ 74529599 (+) |
LOC110496053 | LOC106561188 | coding | upstream | 688937 | 74210463 ~ 74221530 (+) |
LOC110496029 | LOC106561185 | coding | upstream | 711781 | 74178483 ~ 74198686 (+) |
LOC118936821 | LOC106561223 | coding | downstream | 8248 | 74971238 ~ 74988691 (+) |
LOC110496136 | LOC106561223 | coding | downstream | 28665 | 74991655 ~ 75145608 (+) |
LOC110501950 | LOC106561208 | coding | downstream | 179012 | 75142002 ~ 75256839 (+) |
LOC110496163 | LOC106561209 | coding | downstream | 315880 | 75278870 ~ 75305291 (+) |
LOC118942025 | NA | coding | downstream | 590259 | 75553249 ~ 75554613 (+) |
G184122 | NA | non-coding | upstream | 29349 | 74878646 ~ 74881118 (+) |
G184075 | NA | non-coding | upstream | 106653 | 74803595 ~ 74803814 (+) |
G184072 | NA | non-coding | upstream | 117728 | 74792406 ~ 74792739 (+) |
G184060 | NA | non-coding | upstream | 124799 | 74785432 ~ 74785668 (+) |
G184055 | NA | non-coding | upstream | 128277 | 74781959 ~ 74782190 (+) |
G184332 | NA | non-coding | downstream | 56113 | 75019103 ~ 75034943 (+) |
G184335 | NA | non-coding | downstream | 76775 | 75039765 ~ 75045926 (+) |
G184341 | NA | non-coding | downstream | 94007 | 75056997 ~ 75057785 (+) |
G184358 | NA | non-coding | downstream | 116942 | 75079932 ~ 75080163 (+) |
G184359 | NA | non-coding | downstream | 118831 | 75081821 ~ 75082029 (+) |
G183361 | NA | other | upstream | 375441 | 74529649 ~ 74535026 (+) |
G182144 | NA | other | upstream | 1285949 | 73622536 ~ 73624518 (+) |
G182139 | LOC106561173 | other | upstream | 1300230 | 73606892 ~ 73610237 (+) |
LOC110496459 | LOC106561246 | other | downstream | 1204667 | 76167573 ~ 76181555 (+) |
G185462 | chkb | other | downstream | 1470827 | 76433817 ~ 76434615 (+) |
G185549 | LOC106561235 | other | downstream | 1571388 | 76534378 ~ 76606975 (+) |
G185718 | NA | other | downstream | 1867423 | 76830413 ~ 76832500 (+) |