XLOC_020695


Basic Information

Item Value
gene id XLOC_020695
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 1440678 ~ 1457344 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042247
cagtgtggatcttctcaTGATGTCTCAAACCGGTCTGCTGTTTAAAGCGCTTCCCACACTCAGGACACGAATAAGGCCTCTCATTTGTATGAACTCTAAGATGGTCCCTTAGCTGTGAAGCCCAAAAGAAAGTCTTGTCGCATTGATCACATCTGtgcggcctctctccagtgtggatcagccGGTGCTGCTTAAGCTGGTTTAGTTGTCTGAAATTCTCCCCGCACTGAGCACACGTGTACGGTCTCCCTCCAGTGTGGACCagcatgtgttgattaaggtgtggagagtctctgaaactcttcccgcactgagtACATACGTGTgttttctctccggtgtggatcatcGTGTGTCGATTAAGTTGGTACAACTGTctgaaactcttctcacactgcGTACATccgaatggtttctctccggtgtgaatcagCGCGTGTCGTCTAAGGTGGTGGGATTTTCTGAAACTCGCCCCGCATTGAGCACACGTGtgtggtctctctccagtgtggaccagcatgtgttgattaagggaggATAACTGTCTGAAGCTCGTCCCACACTGGGCACATgagtacggtttctctccggtgtggatcatcatgtgctGTTTAAGTCTTGATAGTCGTCTGAAACCCGTCCCACACTCGGTgcatgtgtacggtttctctccgctGTGAATCATCATGTGACGGTTAAACGTCTTTTTGCACGACAGACTCTTCCCGCACTCAGTGCAGATTAAACATTGCTTGTATTTTGTCTTCTCTTCACATGTGTGCTCCTGTGGTTTAGACATGACGGTGCGTCTGAAATAAAGGTAAGAACACTGCAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042247 True 835 lncRNA 0.49 2 1440678 1457344

Neighbor

gene id symbol gene type direction distance location
XLOC_020694 NA coding downstream 75337 1363340 ~ 1365341 (-)
XLOC_020693 BX322657.4 coding downstream 80822 1320991 ~ 1359856 (-)
XLOC_020692 NA coding downstream 123905 1315728 ~ 1316773 (-)
XLOC_020691 NA coding downstream 149822 1266991 ~ 1290856 (-)
XLOC_020690 NA coding downstream 171238 1260950 ~ 1269440 (-)
XLOC_020697 NA coding upstream 24139 1481483 ~ 1589655 (-)
XLOC_020698 NA coding upstream 40546 1497890 ~ 1525556 (-)
XLOC_020699 NA coding upstream 148321 1605665 ~ 1608245 (-)
XLOC_020700 NA coding upstream 225313 1682657 ~ 1809866 (-)
XLOC_020701 NA coding upstream 246346 1703690 ~ 1749740 (-)
XLOC_020689 CU570769.4 non-coding downstream 210656 1229906 ~ 1230022 (-)

Expression


Co-expression Network