LOC110496976 (hras)


Basic Information

Item Value
gene id LOC110496976
gene name hras
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 78366116 ~ 78393964 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956249.1
TGGGCGTGGGCTCCAACAGACTTGACTTCATCCTCTCCGTCTTCGAAGCACATTGTGCGCTATGATTTAGCCTCGCGTACAACATTGAACGAATGCTGTAAAAATTGGGCTAAAAAGTATGAGTTCTGGAATAATAACATATTTATGTTGTCGAACACTGTTGTGAGACATTCGTTGAGAAAACGggcctaccatttgtatttctatTCTTGGAACACTCAGAAGCTACTGAGTTGAAACATTGTTTCCAGTAGACCAAGTCACGCTCCTGATTATTGGGTAGAGCTCTGCTTGTTtgtgtgtggggAGCAGTGAGGATGACTGAGTACaagttggtggtggtgggggctgGAGGTGTGGGGAAGAGTGCACTCACTATCCAGCTCATCCAGAACCACTTTGTGGATGAATACGACCCCACCATagagGACTCATACAGGAAGCAGGTGGTGATTGATGGGGAGACATGTCTGCTGGACATCCTGGACACTGCAGGTCAGGAGGAGTACAGCGCTATGAGGGACCAGTACATGAGGACAGGGGAGGGCTTCCTCTGTGTCTTCGCCATCAACAACACCAAGTCCTTTGAGGACATCCAccagtacagGGAACAGATCAAGCGTGTGAAGGACTCTGACGACGTGCCCATGGTCCTGGTGGGTAATAAATGTGACCTCCCATCGCGTACCGTGGACACGCGGCAAGCACAGGAACTGGCCCGCAGCTACGGAATTCCCTACATCGAGACCTCTGCCAAGACACGACAGGGGGTGGAGGACGCCTTCTACACGCTAGTGAGAGAGATCAGGCAGCACAAGCTGAGGAAGCTCAACCCTCCGGATGAGAGTGGACAGGACTGCATGAGCTGCCGCTGTGTGGTGTCGTGATGGAGGTTACCAGTTCGGGGTGAGGAGTGGACCTAGTGGCAGAATGGACTTAAAGAATGATGGTGGAGGATGAAACAACAACTAACTTTGAAACGGAAGAGTACAGTCTAAGAAAAGCAGACACACCACCAGGCTGACTGTACCATAGACATTTGGGAGAGGGGGATCTTGCCCCTGCCAGGCCAGGCTAGACTAGGCTGTCTGTCCCCTCTTTGAGTCCGCCTGCCAGAGCAACACCACTAATGACTGTTTCTCACCAGTGTGATCATGCTGGGCAGCTCCAATGAGTTCCTGCTAAGTTATTGTTTTACAGTCTCAACACTGGTCTTAAAGGGAGGTGTCACCAATCCAATCCCTGGTGAGTCCCCTTCACCAACACCTCAAAACCCTGATTTTACATTTGACCCCCTGGAAAGACTGGACAGTAGTAGCCTAAATCCCCATCCCTAATTTAACCTCCCCCCGCCTCCTTGTTCCTCTCTAGAGGGGCTCTGCAGTAACCTCATTATTACGGATACAAGTATGGGGATGGAGCATGACAAAAGACACGCCAGATAGGATTTCTTTTTTTTACGGTTAGTCTAGCTGTCAAACCTTTCTTTTTTTTACGGTTAGTCTAGCTGTCAAACCTTTTTTTTACGGTTAGTCTAGCTGTCAaacctttcttttttttaaagactttTTTGTGATCGAAGGTTTTGAAGGTGATCATACTCGGCACTGTAAAGTAAGCCAGGATGTTTATTTTGTGTGATGGGTTGTTGCTATTTTAAGACCTGTCACCGTGAGGAAGTCCTTATTCGGGGCCCTTACGAGGGCATGGCTGTGGATCAGACCGATGGATGGACTCATTTTCCCAGAGTGCCATTGCCTTCCCCCACAgaagtgtgtgtgcgcgcactcgTCAGTGTGCTAAAGAGTTCCCTTTGTGGAGTAATATAGTACTAGATATTGTAGGTTCTGGTGCAATAGGAATGTTTACTGTCTTACTAGGTTTAAGAATTGGGAATAAACCATCTCTCTCATCCCTATTTATTATTTGCTTGTATTTCTTGGGTGGAGAAGGGAGGGGTACATGAGTGATGTTTTACTTGCTGTTGCCTTCAAGGTTTGGCTGAATGATAGTTTGAGGGATGGGAGACTAACGTCATTCCTTGGTCCATGCAGTGCCATTATTTACCATGGGATGGTTATGTAGTGAAAGATTATTCTTGCACAGCCTTTCAGGGAAGTGGAACAAATACCCTTTGAGATTGTGCTATTTTAAAACACTGTTGGCATCCATTTCTTTCCTATTCCTTTGCTTAGACAACAGTATGTTGTTTAGTATAGTTTTACATTTCTAGATTGCAAGTATCGGTCCTCACTGTGTTTTTAAGGCTCAGGAAACGGGAATGTCTAGAAATGTCTCGCCTTTGTATCTTATGTTCCAGGATGAAATCTGTGAAATTGAAATTCTAATGCACAAGACCTGCCTTAAATGAATGGTAATATGTGGGATAAAACTGTTTTGGCCTCCTAAAATAAccttctctctcattctactCGCTACTGCCTCCTCAGTTGGATCTTTGGTTCCCTGAGAAGATAATTTAATTCAAGCTGGTCATGTACGAGCCAACTTCATTTGCAAGAAAAGTCAGAGGAAAACGTTCTTCACTTTAGGGGTTCGCTTGTGATATTCCtcaattacatttgaatcatttagcagacgctcttatccagataTGTCTGGATATTGAATGGTGTAGATAGACCTACTACCTTTTGCGCTCTATACAACACTAACCGCAGCATAGGGCTGCCAATACAAATGAacactgcttggtcctgtttAACTTGCCTTATTATTTGTTAGCTAGTACTTCATGCCTTAGAGTAGTAAGTTTGCCTGAAGCAGGTGTTTCTGTGGTGGTCTGTCTGCTTTCCTCTGTGGATAACTGTTGTGAATCACTGGTGGTGATTGGAGATCTGCTCCTTCTGGGATTTGTTTATCTTTCCCTTGATTAACAGACATGAGGAAAAACGAACTCTGAAACAGTCCAACCAGATGAGATTCTGTACAGCATGCCCTGTCTGATTAGCTAatggtttttgtgtgtgttagtcCAAACTAAGTTTGCCATAATTAAACAATCTTAATTCAATAAGTGTTCTTTTTACCTTCTAAGAGCCGCTGGCTTTTTATTTCCCCCTCCTGTTTTTGAAGGTACTTACCCCCACAGTTCAGCCACAGTGACCCATATACTGTAGGACATTGTGATGCCTCATTAGACTTCAGTCAAAGCCAACACCTTGACGTCTTGTCTAGAAGATAGACCTTAACATAATCACTTTATTCTGTCGCTAGAAATGCTTAATTTCACTGACTTTTTGCTGCTATCATACATGTGAGTGGTGTTCCTTAGTATACGTACAGTACGTGCTCTTGTATGTGGTTTTCCAGGAGCTGCCCCCCTCCAACAAACACTCTTCTGAATTACCCCATCTTACCTGAACACAATTACACCAGTTGGCAATTACACCAGTAAGAGATTTTTTGACCTGCTCCCTCCACCATGAGGGCCCTTCAGTCAGACAATACTCCCCAAGATCATCTCACCTTTCCTGGGTTGCTACCCTTCATATGTTGGACCCAGGGgatgaatgggtctgaatatgAAGATACTGCACACAGGCTTGACCGTTACCTCTGACAACAGCCACTATACCTCTTCTGGCTCTGTCTGGGTGGAACACCTCTACTGTGTTGTGTGGACCACAGATTATATTCTGGAGCTCTGAGGGATTCAGGGATGATGTTGGTCTTCTGTGTGTTTTATTCTCAATTTATTGTTGATGATTTTGGGGTCTTAACTGTGAAAAAGTGTGTTTTTAAcagaaaatattatttgtgttgtATTAGTATAGGGCACTCCATAACCATAAAGTAAAGATACTCTGTACCTTGAAAAATAAATAGCCCATCTTAAACAAATGTAGGTCTTTGTCCCCATAATGATCTACTGTgtaatgttaaacaaatcagaccTGCTATGTAACTTGTTTATCAAGTAGACCTCTGGTGTTAGATGTGAACTGTACAGTTGTCTGAACTATAGTTGGCTGTTATATTCTACATCTCACACAATGTCCCTTGTCTGTCTATACTCTGTGCTTTGACTGACTGCCAGTTATGAGCACACATCTAAAGGTAAATGTTTAGAAATTGGACATCAGTTGTCATTGAGGAATACAAGGCCAGCAGGCCATGTCTGAAGGGAGGGGAGACTTTTTGGGGGTCAAAAACATGGGGAAAACCCCCCAGTGTCCAAGGACTGAAACCAAAAAGGGCTTGCTTCTCCCTTGTAAAACTGTAGTGTGAACATGTGAGAGAGGATGTGGGATTGGAAGTTTGATTGTGAAAATAAACTATTTAAGATGTATTTACTCTAACAAAATGGCAAATGTGCAGCAGGGCAGGAATAAAGGTGTCAAGATGAACTTA
>XM_036956246.1
gtgcTCACCGGGGCGGTTCATACAGGGCTGGGCGTGGGCTCCAACAGACTTGACTTCATCCTCTCCGTCTTCGAAGCACATTGTGCGCTATGATTTAGCCTCGCGTACAACATTGAACGAATGCTGTAAAAATTGGGCTAAAAAGTATGAGTTCTGGAATAATAACATATTTATGTTGTCGAACACTGTTGTGAGACATTCGTTGAGAAAACGggcctaccatttgtatttctatTCTTGGAACACTCAGAAGCTACTGAGTTGAAACATTGTTTCCAGTAGACCAAGTCACGCTCCTGATTATTGGGTAGAGCTCTGCTTGTTcagtgtgtgtggggAGCAGTGAGGATGACTGAGTACaagttggtggtggtgggggctgGAGGTGTGGGGAAGAGTGCACTCACTATCCAGCTCATCCAGAACCACTTTGTGGATGAATACGACCCCACCATagagGACTCATACAGGAAGCAGGTGGTGATTGATGGGGAGACATGTCTGCTGGACATCCTGGACACTGCAGGTCAGGAGGAGTACAGCGCTATGAGGGACCAGTACATGAGGACAGGGGAGGGCTTCCTCTGTGTCTTCGCCATCAACAACACCAAGTCCTTTGAGGACATCCAccagtacagGGAACAGATCAAGCGTGTGAAGGACTCTGACGACGTGCCCATGGTCCTGGTGGGTAATAAATGTGACCTCCCATCGCGTACCGTGGACACGCGGCAAGCACAGGAACTGGCCCGCAGCTACGGAATTCCCTACATCGAGACCTCTGCCAAGACACGACAGGGGGTGGAGGACGCCTTCTACACGCTAGTGAGAGAGATCAGGCAGCACAAGCTGAGGAAGCTCAACCCTCCGGATGAGAGTGGACAGGACTGCATGAGCTGCCGCTGTGTGGTGTCGTGATGGAGGTTACCAGTTCGGGGTGAGGAGTGGACCTAGTGGCAGAATGGACTTAAAGAATGATGGTGGAGGATGAAACAACAACTAACTTTGAAACGGAAGAGTACAGTCTAAGAAAAGCAGACACACCACCAGGCTGACTGTACCATAGACATTTGGGAGAGGGGGATCTTGCCCCTGCCAGGCCAGGCTAGACTAGGCTGTCTGTCCCCTCTTTGAGTCCGCCTGCCAGAGCAACACCACTAATGACTGTTTCTCACCAGTGTGATCATGCTGGGCAGCTCCAATGAGTTCCTGCTAAGTTATTGTTTTACAGTCTCAACACTGGTCTTAAAGGGAGGTGTCACCAATCCAATCCCTGGTGAGTCCCCTTCACCAACACCTCAAAACCCTGATTTTACATTTGACCCCCTGGAAAGACTGGACAGTAGTAGCCTAAATCCCCATCCCTAATTTAACCTCCCCCCGCCTCCTTGTTCCTCTCTAGAGGGGCTCTGCAGTAACCTCATTATTACGGATACAAGTATGGGGATGGAGCATGACAAAAGACACGCCAGATAGGATTTCTTTTTTTTACGGTTAGTCTAGCTGTCAAACCTTTCTTTTTTTTACGGTTAGTCTAGCTGTCAAACCTTTTTTTTACGGTTAGTCTAGCTGTCAaacctttcttttttttaaagactttTTTGTGATCGAAGGTTTTGAAGGTGATCATACTCGGCACTGTAAAGTAAGCCAGGATGTTTATTTTGTGTGATGGGTTGTTGCTATTTTAAGACCTGTCACCGTGAGGAAGTCCTTATTCGGGGCCCTTACGAGGGCATGGCTGTGGATCAGACCGATGGATGGACTCATTTTCCCAGAGTGCCATTGCCTTCCCCCACAgaagtgtgtgtgcgcgcactcgTCAGTGTGCTAAAGAGTTCCCTTTGTGGAGTAATATAGTACTAGATATTGTAGGTTCTGGTGCAATAGGAATGTTTACTGTCTTACTAGGTTTAAGAATTGGGAATAAACCATCTCTCTCATCCCTATTTATTATTTGCTTGTATTTCTTGGGTGGAGAAGGGAGGGGTACATGAGTGATGTTTTACTTGCTGTTGCCTTCAAGGTTTGGCTGAATGATAGTTTGAGGGATGGGAGACTAACGTCATTCCTTGGTCCATGCAGTGCCATTATTTACCATGGGATGGTTATGTAGTGAAAGATTATTCTTGCACAGCCTTTCAGGGAAGTGGAACAAATACCCTTTGAGATTGTGCTATTTTAAAACACTGTTGGCATCCATTTCTTTCCTATTCCTTTGCTTAGACAACAGTATGTTGTTTAGTATAGTTTTACATTTCTAGATTGCAAGTATCGGTCCTCACTGTGTTTTTAAGGCTCAGGAAACGGGAATGTCTAGAAATGTCTCGCCTTTGTATCTTATGTTCCAGGATGAAATCTGTGAAATTGAAATTCTAATGCACAAGACCTGCCTTAAATGAATGGTAATATGTGGGATAAAACTGTTTTGGCCTCCTAAAATAAccttctctctcattctactCGCTACTGCCTCCTCAGTTGGATCTTTGGTTCCCTGAGAAGATAATTTAATTCAAGCTGGTCATGTACGAGCCAACTTCATTTGCAAGAAAAGTCAGAGGAAAACGTTCTTCACTTTAGGGGTTCGCTTGTGATATTCCtcaattacatttgaatcatttagcagacgctcttatccagataTGTCTGGATATTGAATGGTGTAGATAGACCTACTACCTTTTGCGCTCTATACAACACTAACCGCAGCATAGGGCTGCCAATACAAATGAacactgcttggtcctgtttAACTTGCCTTATTATTTGTTAGCTAGTACTTCATGCCTTAGAGTAGTAAGTTTGCCTGAAGCAGGTGTTTCTGTGGTGGTCTGTCTGCTTTCCTCTGTGGATAACTGTTGTGAATCACTGGTGGTGATTGGAGATCTGCTCCTTCTGGGATTTGTTTATCTTTCCCTTGATTAACAGACATGAGGAAAAACGAACTCTGAAACAGTCCAACCAGATGAGATTCTGTACAGCATGCCCTGTCTGATTAGCTAatggtttttgtgtgtgttagtcCAAACTAAGTTTGCCATAATTAAACAATCTTAATTCAATAAGTGTTCTTTTTACCTTCTAAGAGCCGCTGGCTTTTTATTTCCCCCTCCTGTTTTTGAAGGTACTTACCCCCACAGTTCAGCCACAGTGACCCATATACTGTAGGACATTGTGATGCCTCATTAGACTTCAGTCAAAGCCAACACCTTGACGTCTTGTCTAGAAGATAGACCTTAACATAATCACTTTATTCTGTCGCTAGAAATGCTTAATTTCACTGACTTTTTGCTGCTATCATACATGTGAGTGGTGTTCCTTAGTATACGTACAGTACGTGCTCTTGTATGTGGTTTTCCAGGAGCTGCCCCCCTCCAACAAACACTCTTCTGAATTACCCCATCTTACCTGAACACAATTACACCAGTTGGCAATTACACCAGTAAGAGATTTTTTGACCTGCTCCCTCCACCATGAGGGCCCTTCAGTCAGACAATACTCCCCAAGATCATCTCACCTTTCCTGGGTTGCTACCCTTCATATGTTGGACCCAGGGgatgaatgggtctgaatatgAAGATACTGCACACAGGCTTGACCGTTACCTCTGACAACAGCCACTATACCTCTTCTGGCTCTGTCTGGGTGGAACACCTCTACTGTGTTGTGTGGACCACAGATTATATTCTGGAGCTCTGAGGGATTCAGGGATGATGTTGGTCTTCTGTGTGTTTTATTCTCAATTTATTGTTGATGATTTTGGGGTCTTAACTGTGAAAAAGTGTGTTTTTAAcagaaaatattatttgtgttgtATTAGTATAGGGCACTCCATAACCATAAAGTAAAGATACTCTGTACCTTGAAAAATAAATAGCCCATCTTAAACAAATGTAGGTCTTTGTCCCCATAATGATCTACTGTgtaatgttaaacaaatcagaccTGCTATGTAACTTGTTTATCAAGTAGACCTCTGGTGTTAGATGTGAACTGTACAGTTGTCTGAACTATAGTTGGCTGTTATATTCTACATCTCACACAATGTCCCTTGTCTGTCTATACTCTGTGCTTTGACTGACTGCCAGTTATGAGCACACATCTAAAGGTAAATGTTTAGAAATTGGACATCAGTTGTCATTGAGGAATACAAGGCCAGCAGGCCATGTCTGAAGGGAGGGGAGACTTTTTGGGGGTCAAAAACATGGGGAAAACCCCCCAGTGTCCAAGGACTGAAACCAAAAAGGGCTTGCTTCTCCCTTGTAAAACTGTAGTGTGAACATGTGAGAGAGGATGTGGGATTGGAAGTTTGATTGTGAAAATAAACTATTTAAGATGTATTTACTCTAACAAAATGGCAAATGTGCAGCAGGGCAGGAATAAAGGTGTCAAGATGAACTTA

Function

symbol description
hras Enables GTPase activity; guanyl ribonucleotide binding activity; and protein C-terminus binding activity. Involved in several processes, including positive regulation of MAPK cascade; regulation of GTPase activity; and regulation of protein localization to membrane. Located in several cellular components, including Golgi apparatus; cytosol; and nucleoplasm. Is active in glutamatergic synapse. Implicated in several diseases, including Costello syndrome; autistic disorder; carcinoma (multiple); epidermal nevus; and large congenital melanocytic nevus. Biomarker of Alzheimer's disease; endometrial carcinoma; glioblastoma; liver disease (multiple); and urinary bladder cancer.

NR:

description
PREDICTED: GTPase HRas isoform X1

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K02833 HRAS; GTPase HRas

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956249.1 False 4374 mRNA 0.44 6 78366116 78393936
XM_036956246.1 True 4405 mRNA 0.44 6 78366116 78393964

Neighbor

gene id symbol gene type direction distance location
LOC110496911 LOC106561320 coding downstream 24540 78301573 ~ 78344271 (-)
LOC110496900 LOC106561323 coding downstream 95896 78267071 ~ 78270220 (-)
LOC110496855 LOC106561324 coding downstream 147500 78151133 ~ 78218616 (-)
LOC118942057 NA coding downstream 223648 78129577 ~ 78142468 (-)
LOC110496836 LOC100286559 coding downstream 262840 78079493 ~ 78103276 (-)
LOC110497044 irf7b coding upstream 167014 78560978 ~ 78565956 (-)
LOC110497066 LOC106561314 coding upstream 316934 78710898 ~ 78853465 (-)
LOC110497088 trim44 coding upstream 532487 78926451 ~ 78998262 (-)
LOC110497116 fjx1 coding upstream 653468 79047432 ~ 79049962 (-)
LOC110502122 LOC106561308 coding upstream 849648 79243612 ~ 79276976 (-)
G188067 LOC106561319 non-coding downstream 12206 78349980 ~ 78353910 (-)
G187880 NA non-coding downstream 69880 78295820 ~ 78296236 (-)
G187809 NA non-coding downstream 168843 78138268 ~ 78197273 (-)
G187767 NA non-coding downstream 289730 78076139 ~ 78076386 (-)
G188210 NA non-coding upstream 140556 78534520 ~ 78534808 (-)
G188238 LOC106561315 non-coding upstream 184453 78578417 ~ 78580141 (-)
G188240 NA non-coding upstream 190456 78584420 ~ 78585120 (-)
G188283 LOC105030512 non-coding upstream 240631 78634595 ~ 78634833 (-)
G188295 NA non-coding upstream 249287 78643251 ~ 78643460 (-)
G187579 LOC106561332 other downstream 662627 77702899 ~ 77703489 (-)
G187490 NA other downstream 895019 77470393 ~ 77471675 (-)
LOC110496628 rabl2b other downstream 1194477 77166074 ~ 77171661 (-)
si:dkey-234i14.6 LOC106561240 other downstream 2042226 76321757 ~ 76341834 (-)
G186197 LOC106561241 other downstream 2072724 76273524 ~ 76293392 (-)
G188257 NA other upstream 222618 78616582 ~ 78617307 (-)
G189093 slc1a2 other upstream 829266 79223230 ~ 79224998 (-)
G189256 NA other upstream 971885 79365849 ~ 79366569 (-)
G189806 NA other upstream 1366075 79760039 ~ 79760627 (-)
G190857 NA other upstream 2158163 80552127 ~ 80552484 (-)

Expression


Co-expression Network