Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944149 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 78931423 ~ 78931476 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039456.1 | True | 54 | mRNA | 0.46 | 1 | 78931423 | 78931476 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497055 | LOC106561315 | coding | upstream | 351233 | 78578149 ~ 78580190 (+) |
| LOC110502110 | LOC106561316 | coding | upstream | 374155 | 78537027 ~ 78557268 (+) |
| LOC110496993 | LOC106561317 | coding | upstream | 412352 | 78467699 ~ 78519071 (+) |
| lrrc56 | lrrc56 | coding | upstream | 479860 | 78394108 ~ 78451563 (+) |
| LOC110496927 | LOC106561319 | coding | upstream | 578778 | 78348080 ~ 78352645 (+) |
| LOC110497132 | pamr1 | coding | downstream | 172098 | 79103574 ~ 79151359 (+) |
| LOC110497158 | LOC106573351 | coding | downstream | 245552 | 79177028 ~ 79235909 (+) |
| LOC110497165 | lrrc4c | coding | downstream | 985446 | 79916922 ~ 80048182 (+) |
| rag2 | rag2 | coding | downstream | 1792884 | 80724360 ~ 80727535 (+) |
| furinb | LOC106561302 | coding | downstream | 1848583 | 80780059 ~ 80977313 (+) |
| G188577 | NA | non-coding | upstream | 67448 | 78863738 ~ 78863975 (+) |
| G188384 | NA | non-coding | upstream | 200928 | 78727674 ~ 78730495 (+) |
| G188376 | NA | non-coding | upstream | 219594 | 78711046 ~ 78711829 (+) |
| G188374 | NA | non-coding | upstream | 226434 | 78704705 ~ 78704989 (+) |
| G188369 | NA | non-coding | upstream | 238265 | 78692893 ~ 78693158 (+) |
| G188721 | NA | non-coding | downstream | 69618 | 79001094 ~ 79006319 (+) |
| G188745 | NA | non-coding | downstream | 112678 | 79044154 ~ 79044383 (+) |
| G188888 | NA | non-coding | downstream | 166189 | 79097665 ~ 79097880 (+) |
| G188890 | NA | non-coding | downstream | 169924 | 79101400 ~ 79101723 (+) |
| G188945 | NA | non-coding | downstream | 243730 | 79175206 ~ 79175428 (+) |
| G187320 | LOC106561323 | other | upstream | 661378 | 78267289 ~ 78270045 (+) |
| G187260 | NA | other | upstream | 753840 | 78137513 ~ 78177583 (+) |
| LOC110502077 | LOC106561326 | other | upstream | 882623 | 78047373 ~ 78066844 (+) |
| G191052 | NA | other | downstream | 1823665 | 80755141 ~ 80756647 (+) |
| G191057 | accs | other | downstream | 1833856 | 80765332 ~ 80766714 (+) |
| LOC110497314 | cfap44 | other | downstream | 2134078 | 81058184 ~ 81080502 (+) |
| LOC110497320 | paf | other | downstream | 2152352 | 81083756 ~ 81086188 (+) |
| LOC110497665 | LOC106561427 | other | downstream | 3434809 | 82366183 ~ 82393779 (+) |
