LOC110502133 (pdhx)



Basic Information


Item Value
gene id LOC110502133
gene name pdhx
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 79304316 ~ 79350048 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036934247.1
ATGGATGGGTCTGTTCCAGGTAACCATAGTGACAGCAACAGCCCTGTGAGTGGCGGAGAGGTCCGGCTGATGGAGGAGGGCAGTCCTGCAGTGCATCTGGGGACTCTGATCGCCCTCAtggtggaggaaggggaggactggAAGACGGTGGAGATCCCTCCCCCTGGGGTAGCCGTGCTCACCCAGGCTCCTCCTCCTGCAGCTGCAGCCCCTCCCCCTCAGATGGCCCCCTCTGCACCCCCACTACCTCCCCCCAGAgGTACCTACACAGAGATCACTGCCTCCAACGTATGGTGTGTCATTGCCCAGAGGCTAACGCAGTCCAAGACCACCATCCCCCATGCCTACGCCACCGTCGACTGTGACCTGGGTGCCATCTTGCAGCTGCGCAAGGAGCTGGCCAAAGTAGAGATCAAAGTGTCCATCAATGATTTTATCATAAAGGCAGAAGCTGCTACACTCATGGAGCTGCCGGAGGTCAACGTGACCTGGACGGGGGAGGCCCCCCAGGCGCTGGACTCCATCAGCATCTCCATCGCTGTGGCGACTGAGAAGGGCCTCATTACCCCCATCATCACAAACGCTGCTGACAAGGGAGTGCAGGAGATCTCCGCTAACGCCAAGGCACTGGCCCAAAATGCTTGGGATGGGAAGCTGCTTCCTTGTGAGTACCAGGGAGGCTCATACAGTATTTCTAACCTGGGCATGTTTTGCATCAGTGCGGTGATCAACCCTCCGCAGGTGTGTATCCTGTCCCTGGGCACCTCCAAGGCTGTGCACCGTCTGACCGAGGAGACCGGTGCCCTGAGCACCGTCACCCTGTCTAGTGACAGGTGCCTAGTGGACGACAAGCTGGCATCACGCTTCCTGGACAAGTTTTGTGTCAATCTGGAGAGGCTGCAGTGCATGTCACTAGcctgagatggagggatggagaatgggaaggaaggagagagggaacactTCCACCATGAAACTTATAGTGTGTTCTGCAAAGGAGCAGCTGTCTTATTTTAACTAAATTAACATTGCCATGGCTAGTTGTGCatatgttttattttacc

Function


symbol description
pdhx Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Predicted to be part of pyruvate dehydrogenase complex. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in pyruvate decarboxylase deficiency. Orthologous to human PDHX (pyruvate dehydrogenase complex component X).

NR:

description
pyruvate dehydrogenase protein X component, mitochondrial-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036934247.1 True 1064 mRNA 0.56 7 79304316 79350048

Neighbor


gene id symbol gene type direction distance location
LOC110502122 LOC106561308 coding downstream 27340 79243612 ~ 79276976 (-)
LOC110497116 fjx1 coding downstream 254354 79047432 ~ 79049962 (-)
LOC110497088 trim44 coding downstream 306054 78926451 ~ 78998262 (-)
LOC110497066 LOC106561314 coding downstream 450851 78710898 ~ 78853465 (-)
LOC110497044 irf7b coding downstream 738360 78560978 ~ 78565956 (-)
ehf ehf coding upstream 36235 79386283 ~ 79393989 (-)
iftap cssa10h11orf74 coding upstream 1358051 80708099 ~ 80725419 (-)
rag1 rag1 coding upstream 1377855 80727903 ~ 80734996 (-)
si:ch211-256a21.4 LOC106561345 coding upstream 1405002 80755050 ~ 80765470 (-)
accs accs coding upstream 1415907 80765955 ~ 80776358 (-)
G189090 NA non-coding downstream 68493 79231267 ~ 79235823 (-)
G189092 slc1a2 non-coding downstream 76356 79227131 ~ 79227960 (-)
G189119 NA non-coding downstream 135850 79161114 ~ 79168466 (-)
G189118 NA non-coding downstream 143815 79160228 ~ 79160501 (-)
G189238 NA non-coding upstream 3478 79353526 ~ 79353823 (-)
G189248 NA non-coding upstream 11219 79361267 ~ 79361550 (-)
G189560 NA non-coding upstream 177480 79527528 ~ 79625285 (-)
G189768 NA non-coding upstream 380892 79730940 ~ 79731329 (-)
G189827 NA non-coding upstream 434301 79784349 ~ 79784610 (-)
G189093 slc1a2 other downstream 79318 79223230 ~ 79224998 (-)
G188257 NA other downstream 687009 78616582 ~ 78617307 (-)
G187579 LOC106561332 other downstream 1600827 77702899 ~ 77703489 (-)
G187490 NA other downstream 1833219 77470393 ~ 77471675 (-)
LOC110496628 rabl2b other downstream 2132677 77166074 ~ 77171661 (-)
G189256 NA other upstream 15801 79365849 ~ 79366569 (-)
G189806 NA other upstream 409991 79760039 ~ 79760627 (-)
G190857 NA other upstream 1202079 80552127 ~ 80552484 (-)
G191669 LOC100380853 other upstream 1565631 80915679 ~ 80921415 (-)
cart2 LOC105018397 other upstream 1842480 81192528 ~ 81194099 (-)

Expression



Co-expression Network