LOC110497556 (LOC100380647)


Basic Information

Item Value
gene id LOC110497556
gene name LOC100380647
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 81414069 ~ 81475545 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573719.2
CGCGCTATCACGCATGCGCAGACATCGGGTACGTGAACAACGGGAAACAGTCCATTGATCAACAGCTCAAACAGGCAAAAAAAACGCTGCTTAACCGTTGCTCTTTTTAAATCGTGAAATGATCATCTGAGTACTTTTAAATCGTTATAGAAGATAAATAGAAACCACaacgaaaagcttttttgaaggAAAGTAATTTTAGAAGTGAGGCTGAGAAACAATTTATTTGGCTAGACTGGGTGCGAGGCAAGGGCGTGTTTGAATCGCAGAGGGAGACACCCTCCTTGTTTTAGCTTGTGCATGTTATTGCATTGTGTATATTTGGTCTTTTTAACTGTTACGTTTTGGGAATCGGCTTGAAGATGGGGTGTACTCTGAGCACGGATGATAAACAGGCGCAGGAGCGCAGTAAAATGATCGACAGAAATTTACGGGACGACGGGGAAAAAGCAGCACGGGAGGTTAAACTGCTTCTGCTCGgTGCTGGGGAGTCAGGGAAGAGTACAATTGTCAAACAGATGAAgaTCATCCATGAGGCGGGCTATTCAGAGGAAGAGTGTAAGCAGTACAAAGCGGTGGTGTACAGCAACACCATCCAGTCCATAATCGCCATCATCAGAGCCATGGGGCGCCTCAAGATCGATTTCTCTGATGCAGCCAGAGCGGATGATGCTCGTCAGCTGTTTGTGCTGGCGGGATCGGCAGAGGAGGGCTTCATGACCGGCGAACTGGCCGGAGTCATCCAGCGCCTCTGGAAGGACGGGGGGGTCCAATCCTGCTTCAGCCGGTCACGAGAGTACCAGCTTAACGACTCCGCCGCCTAtTATCTGAATGACCTGGACAGGATAGCCCACGGAGCGTACGTACCCACCCAGCAGGATGTGCTGAGGACCAGGGTGAAGACCACCGGCATTGTGGAGACGCACTTCACCTTCAAAGACCTCCACTTCAAGATGTTTGATGTGGGGGGTCAGAGGTCCGAGAGGAAGAAGTGGATCCACTGCTTTGAGGGAGTCACTGCCATCATCTTCTGTGTGGCGCTGAGTGACTACGACCTGGTGCTGGCCGAGGACGAGGAGATGAACCGGATGCATGAGAGCATGAAGCTGTTTGACTCCATCTGCAACAACAAGTGGTTCACAGACACCTCCATTATCCTCTTCCTCAACAAGAAGGATCTGTTCGAGGAGAAGATCAAGAAGAGTCCTCTTACTATCTGTTACCCGGAGTACGCagGTTCCAACACGTACGAGGAGGCGGCGGCCTACATCCAGTGTCAGTTTGAGGACCTGAACAAGAGGAAGGACACCAAGGAGATCTACACCCACTTCACCTGTGCCACCGACACCAAGAATGTGCAGTTTGTCTTCGACGCAGTCACCGACGTCATCATCAAGAACAACCTGAAGGACTGTGGCCTCTTCTAGGGCAGTGTGGTGGCCAGAGTGCGCTCAGTGACTTTCTTGGGGACGTCTGTGACTGGAGGGGGGCGGATCATGGACACTTTGTAAAGGACGTCTCTTTTAACCTCTTACCTTATGTTGATCTCTGAAAGGTTTTAAAAATGCCTTGTAGAAAACGTTTGTGTAAAATATTTGTACAACTGTCACTAAGGCCGGAGTTTTtcactgtttttaaaatgtttttcttttaaGAGGTCaaggttttatttttttttaaaggggggCCTTTGCATTCTGTTTCTTCTCATTCTAGGAGAGGAATGGACACTTTTGTTTCTATTTGTAGGTACTTGTGCCTTTGCATGCCTTAGTtgcagtgtgtttgtttttgttagcTAAATTGTAATAGATGTATTTAGATGTTATAATTAATTACACCACCCTCCAAATATTATCTCTATTTGGTTCCAAATATGGTTTCCATGACTGACATCCCAGAATTATTGCATCCATGGAAATGATGGAATAGACCAATTAAGCTCTCGATTAACCAACTTGCTCTCGATAGACCAACTCACTCTTACATACTGAGAGCtgtatgtgtgtctttgtgcATGACTGTGTGTGAGTGCCTTTGCTGCATGACTGTATGCTTGAGTGAGTGAGTAGCATGCATGAATGTGTGGATATAAATACAAAGGGACTCTTTTTACTTGTCATCCTCTTTCAGTCTGGTTTTCTGGAACATGTACCAAAAAGGCACATTTAATGCGACGTCACATGGTTGGTGTGACATGTGGTAACATTCCTACACCAAATCATTATTTTAAAGAGAAACTTTGAAAAGAGGATGACAACTACAGCCTTGTAGCAGACGAGGGGGACAAAGGGAGGCGAATGGGTGTATTTGCACTGTTATGATGTTGACGATAAGTTTCATAATGGTTTCAGGTTACAAAtccccctaacccccaacccttctGTTTCCATTGGATGGGGACTAATAGTGGACTAATTTCCATTATTTTGCTAATAAAATAAATGCTGTGGTGAAACGACGACATCCTTCAACAA

Function

NR:

description
guanine nucleotide-binding protein G(i) subunit alpha-1

GO:

id name namespace
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function

KEGG:

id description
K04630 GNAI; guanine nucleotide-binding protein G(i) subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573719.2 True 2477 mRNA 0.46 9 81414069 81475545

Neighbor

gene id symbol gene type direction distance location
LOC110497549 LOC106561290 coding downstream 21445 81389924 ~ 81392624 (-)
LOC110497515 LOC106561283 coding downstream 40449 81358946 ~ 81373620 (-)
LOC110497525 LOC106561292 coding downstream 55449 81350503 ~ 81358620 (-)
LOC110497501 hakai coding downstream 72255 81338424 ~ 81341814 (-)
actr6 arp6 coding downstream 75810 81331998 ~ 81338259 (-)
LOC110497573 NA coding upstream 92369 81567914 ~ 81580865 (-)
trnar-ucg-2 NA coding upstream 109428 81584973 ~ 81585045 (-)
fanci fanci coding upstream 112614 81588076 ~ 81612943 (-)
ces2b LOC106561275 coding upstream 176184 81651729 ~ 81690079 (-)
LOC110497629 rask coding upstream 865079 82340624 ~ 82353376 (-)
G191890 NA non-coding downstream 116435 81232539 ~ 81297634 (-)
LOC118942622 NA non-coding downstream 173320 81232166 ~ 81240770 (-)
G191832 rps17 non-coding downstream 228181 81142424 ~ 81185888 (-)
G191777 paf non-coding downstream 327890 81083561 ~ 81086179 (-)
G191727 LOC106561285 non-coding downstream 361083 81049541 ~ 81052986 (-)
G192224 NA non-coding upstream 19611 81495156 ~ 81495468 (-)
G192255 NA non-coding upstream 62628 81538173 ~ 81539355 (-)
G192257 NA non-coding upstream 66572 81542117 ~ 81542378 (-)
G192258 NA non-coding upstream 67615 81543160 ~ 81543408 (-)
G192259 NA non-coding upstream 69562 81545107 ~ 81545322 (-)
cart2 LOC105018397 other downstream 220224 81192528 ~ 81194099 (-)
G191669 LOC100380853 other downstream 492654 80915679 ~ 80921415 (-)
G190857 NA other downstream 861585 80552127 ~ 80552484 (-)
G189806 NA other downstream 1653442 79760039 ~ 79760627 (-)
G189256 NA other downstream 2047500 79365849 ~ 79366569 (-)
G193745 NA other upstream 1426095 82901640 ~ 82912504 (-)
G193755 NA other upstream 1530285 83005830 ~ 83007976 (-)
LOC110502187 NA other upstream 1744477 83219964 ~ 83223972 (-)
G194491 NA other upstream 2140021 83615566 ~ 83616034 (-)
G195427 NA other upstream 2405995 83881540 ~ 83904451 (-)

Expression


Co-expression Network