LOC110497573


Basic Information

Item Value
gene id LOC110497573
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 81567914 ~ 81580865 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002469688.2
AGAGCTCGGAGGACTAGTGAAGGAGACGGACTAACCCGGAGAAGACCGTGCGTATTTATCCAATGATTGGATCGACAGATGAAGAGTGAGACCGCGAATTAGCCAGACATACGCACTTGGAGGGAAGATAGAACTGAAGACTAAATAAAAGGGATTCCAAAAATATATTTCTTTATCTTGGACCTAAAACACAAGTGTCTGATGAAGCACGCCATCACTACCCGCTCACCAATCCGTCATGAGTCTGAGGCAGCAAGATAAAGTAGTCTACGAAAATGTGAACCGGAGGTCGTTTTCTGTCTTTGGTTATCTAGCTGTATGAGTGTTAAATACCTGTCATAAAGCTAGATAACCGAAAGTAGAAATTACTTCCACATTCTTGTTCCGGTGGAAAATAAGGCCTAGGGTATGCCTAAAACTAAGTTAAGCCTTTTGACAAGTTTCGTCAAGTTCCACCTCAAAGGCGACTCATTCACAACATGGTGTGATCAAGGAGCTCAAATAGGGGACAGAATCATCAAAAAAAGCAAATGAGGAGGAGAATTGCCACACAATACCCCACCCCCTTTACCCACTGGCCTCTAATGCCATCTGTACTGCAAAATGGGAGACAAGAGACACTGTGCCTATGCCAAGATGGGGACAAAGCCAGATCTCCAGAGGATGGGCACgctgagagcagagaggagccaTCTTGGGAGACATTGCTGCAGCACCTAAGATGGCTGGGCTGGCATACGACGTTTGGATGTGGAGTGGTCAGTAGGGAGGGAGATTCTGCATACTCTATTGGTGTTCCTGGTACAGTATGGACCAAACCACTAAACAACAATCAGACTATTGGAAACCATCTCTGTCACTGTCATACAAAGTTTATACAACCAGAGGACCACGACAAGGAAGAGGGAagatttgtgcaatttagttttatttgtgtgtttttttgttagcaatagggtaatagtgtaatgatttgattatttttttaaattgtatttatatactacaatgtgtttctatttgtctttgttacttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002469688.2 True 1036 mRNA 0.43 4 81567914 81580865

Neighbor

gene id symbol gene type direction distance location
LOC110497556 LOC100380647 coding downstream 92369 81414069 ~ 81475545 (-)
LOC110497549 LOC106561290 coding downstream 175290 81389924 ~ 81392624 (-)
LOC110497515 LOC106561283 coding downstream 194294 81358946 ~ 81373620 (-)
LOC110497525 LOC106561292 coding downstream 209294 81350503 ~ 81358620 (-)
LOC110497501 hakai coding downstream 226100 81338424 ~ 81341814 (-)
trnar-ucg-2 NA coding upstream 4108 81584973 ~ 81585045 (-)
fanci fanci coding upstream 7294 81588076 ~ 81612943 (-)
ces2b LOC106561275 coding upstream 70864 81651729 ~ 81690079 (-)
LOC110497629 rask coding upstream 759759 82340624 ~ 82353376 (-)
LOC110497676 bhlh3 coding upstream 820234 82401099 ~ 82405402 (-)
G192259 NA non-coding downstream 22592 81545107 ~ 81545322 (-)
G192258 NA non-coding downstream 24506 81543160 ~ 81543408 (-)
G192257 NA non-coding downstream 25536 81542117 ~ 81542378 (-)
G192255 NA non-coding downstream 28559 81538173 ~ 81539355 (-)
G192224 NA non-coding downstream 72446 81495156 ~ 81495468 (-)
G192304 NA non-coding upstream 64812 81645677 ~ 81646841 (-)
G192306 NA non-coding upstream 67553 81648418 ~ 81649132 (-)
G192308 NA non-coding upstream 70367 81651232 ~ 81651436 (-)
G192382 NA non-coding upstream 193537 81774402 ~ 81775886 (-)
cart2 LOC105018397 other downstream 374069 81192528 ~ 81194099 (-)
G191669 LOC100380853 other downstream 646499 80915679 ~ 80921415 (-)
G190857 NA other downstream 1015430 80552127 ~ 80552484 (-)
G189806 NA other downstream 1807287 79760039 ~ 79760627 (-)
G189256 NA other downstream 2201345 79365849 ~ 79366569 (-)
G193745 NA other upstream 1320775 82901640 ~ 82912504 (-)
G193755 NA other upstream 1424965 83005830 ~ 83007976 (-)
LOC110502187 NA other upstream 1639157 83219964 ~ 83223972 (-)
G194491 NA other upstream 2034701 83615566 ~ 83616034 (-)
G195427 NA other upstream 2300675 83881540 ~ 83904451 (-)

Expression


Co-expression Network