LOC110497874 (btbd11)


Basic Information

Item Value
gene id LOC110497874
gene name btbd11
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 83241269 ~ 83344652 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036957002.1
AGGATCTTACTGCGTAAAACACAGACCACTGTAGCTGCTCTATGTGCTATGATGGAAACACTTCGAAGTTTTAGTTCGGATTGAGAAATATCAACTTGATTCGTTTCCACTGAAGGCAACGGGATAAAATATTGACACGTCAAAATACATCGCAGTCGGGCTTTAATTGCGTTCATTTAATTGCATTGGGCGACGTTGTGAGACATTTTGAGCCATTCATTCCAAAGTCCTCTTTACAGTATGAGGTGCAGTTATGGCAAGCAGTAGTAAGAAGTCAGTGGCGAGGACCCTGGAGGATCTGACGCTTGATTCTGGTTATGGTGGAGCAGCAGACTCCTTTAGGTCTTCCAGTGCTTCACTGTGCTGTTCCGAGGCACATATACCTTATGCGCATGGGGGGAATGTTTGGCATTTAACCGACTCCATGCACAGTCGCCACAACAGCCTGGACACGGTCAACACAGTCTTGGTCGAAGACTCCGATATCCTGGATTGCTCCGGACAGTGCGCTAAACTACCCGAGCTCGAGGACGTGCCATGGAGCCTCGGGGAAGTAGAGAGCGCACTGAACAAGGACGAAGAGTTGAGGCTGGGGGTCGTGTCACAGGAGATCCTGGCTAGGCTCTCGGTCCTCATAAGCCGCGCACTCGTGAGGGTCGCCAAGGAAGCGCAGCGCCTGAGTTTGCGCTATGCCAAATGCACCAAATACGAGATTCAAAGTGCCATAAAGGTTGTCATGTCTTGGACAGTCTCGGTGAACTGCATCACCGCCGCACTCAGTGCCTTGTCTATGTACAACATGAGCACCGAGGACAAGTTCAGCCGCGGAAAGTCACTCAGATGCGGACTCATTTTCAACGTGGGGAAGTTCTTCAGGTGGATGGTGGACAGCCGAGTTGCGGTGAGGATCCACGAGCACGCTGCCATCTACCTGACAGCTTGCATGGAGAGTCTTTTCCGAGAGGTGTACGCACGCGCACTGCGCAGCGCACTTGTGGAGAAAGATAATGGGATCCCTAAATTCACTGTTGAGTCCCTCGAACAGGCCATCAACAACGATTCGGAGTTATGGGGGTTCCTGCAGCAGTATCAATACCTCATTTGTGGGAAGAATGCAAGTGGTGTGCTCAGCCTACCAGAGAGCCTGACTCTGCATCGGGACCAGCAGCGGTCAGGGAAAAGTGGGGAGGGCCACTCCTACAGTCAGTCGGAGCTGCGCTCCATCGAGCAGTGCCTGCTAGCCACACGGGTGGGCAGCATCTCAGAACTCAGTGACCTGGTCTCCCGGGCCATGCACCACCTCCAGCCGCTGCATGTGAAGAACCATAGCAACGGGACGCCCATCCACCAGAAGAGCAGCCCAGTACACTGGGAGCCTGAGGCGCTCTACACTCTCTGCTACTTCATGCACTGTCCCCAGGTGGAATGGGAGAACCCCAACGTAGAACCCTCTAAGGTTACCCTGCAGACAGAGAGGCCGTTCCTGGTTCTACCTCCTCTGATGGAGTGGCTCAGGGTGTCGGTGGCCCACGCAGAGCACCGCCGTAGCTTCTCAGTGGACAGTGACGACGTCCGGCAGGCCGCCAGGCTGCTGCTGCCAGGGGTGGACTGTGAACCACGCCAGCTCAAGACAGATGACTTCTGTGCATCCAGGAAGTTGGATGCAGCATCCACAGAGGCTAAGTTCCTCCAGGACCTGGGATTCCGTATGCTCAACTGTGGCCGGACCGACCTGGTCAAGCAGGCTGTCAATTTGCTGGGGCCTGACGGCATCAACAGCATGAGTGAACAGGGAATGACCCCTCTGATGTACTCCTGTGTGAGAGGGGATGAAGCAATGGTCCAGATGCTGCTGGACGCTGGAGCCGACATCAACAGTGAGGTGCCAAACACAGTGCACAAGTACCCCTCAGTCAACCCCGAAACGCGCCTGGGGACACCACTCACTTTCGCCGTGTTACACGGACATGTCCCTGTCGTGCAGCTGCTCCTGGATGCCCGGGCCAACGTAGAGGGCTCCCTACAGGACGGTATGGAGAACTACACAGAGACCCCGCTACAGCTTGCCTCCGCTGCAGGTAACTTTGAGCTGGTCAGTTTGCTgttggagagaggagcagaccccATGGTGGGAACCGTGTATCGTAACGGTATCTCTACTGCCCCTCATGGAGACATGAACTCCTACAGTCTAGCTGCAGCACATGGACACAGGAATGTGTTCCGCAAGCTGCTGTCCCAGAcggagaaggggaaaggggacGTGCTGTCCCTGGAGGAGATCCTTgctgaggggacagaggaagaaAGGGGCCTGGAGGAGAGGAACCCCTCCCAGCTGGACCTGGTCCGGACCGGCAAGGCCAAGCTCAAGGCCCTGAGAGAGGCCATGTACCACAGCTCTGAACACGGACATGTGGATATCACCATCGACATACGCAGCCTAGgGGTCCCCTGGACGCTGCACACCTGGCTGGAGTCTCTGCGGACGTGTTTCCTGCAGCATCGGAGACCACTGATCCAGGGCCTGCTCAAGGAGTTCAGCTgtattgaggaggaggagtacACACAGGAGCTCATCACCCACGGCCTGCCACTCTTGTTTCAGATCCTACGAGCCAGCAAGAATGAGGTGATCAGCCAGCAGCTGTCTCTGATCTTCACCCAGTGCTACGGACCGTACCCCATCCCCAAACTCCCTGAGATAAAGAGGAAACAGACCTCACGCCTGGATCCTCATTTCCTAAACAACAAGGAGATGTCAGATGTGACCTTCTTGGTGGAGGGGAAGCCATTCTACGCCCACAAAGTCCTGCTCTTCACCGCCTCTGGCAGGTTTAAGTCTCTACTGGCGAACAGACCAGCTGCTGAAAACACATGTATTGAAATCAGCCACGTCAAATACAACATATTCCTGCTGGTGATGCAATACCTCTACTGTGGTGGGACGGAGCATCTGCACATCAGAAACACAGAGGTTATGGAGCTGCTGTCAGCGGCCAAGTTCTTCCAGCTGGAGGCGCTGCAGAGGCACTGTGAGATCATCTGCTCTAAGAACATCAACACAGAAACCTGTGTGGAGATCTACAGCCACACCAAGTTCCTGGATGTCCCAGATTTGGCTGTCTACATCGAGGGCTACTTCCTGAAAAACATGGTGGTGCTGATTGAGCTGGAGCCCTTCAAAACACTGTTGTACGACACGCCTCCAGACAGTCCCGCCACCGATGTACTCCTGGACCTGGAGAAGACCCTGGGCATCCGCATCCAGTCCATCCACCTGTCCTCCTCCAAGGGCTCCATTGTCTGATTGGTTGATTTATTGAGCTGCTAATGGGActggaactgtctgtctgtcaccattGACCCCAGTTCAACACATAGCTGTACTGAACCACACTCAACAGTGACACTTTTAAATTGCTTGCTGTGCTAACACGCTATTGCCATTCTCCTGCAGCCTACTGAGCTTTGGGCCGAGCACTTAGGCAAATGGACAGCGCTGGAACCCCAGAAATTGTGAAAAGGAGATTTTCATAGGGCTGAAGTAAAGCTGACTCATCACAGCAATAGTGGGACTATATCGCTGAGATGCAgtgaggaatgtgtgtgtgtgtgtgtgtgtgtctggaatcATTCGTAAAGCCCCGGCCAACATTACTTCGCTCCTTGACATTAGTCTCCAGACTGCAGTCAGACCTGCCATTACTCCACGTGTCTACTGGGCAGAATCATTGTTGGTACTTTTCTCAGCATGGTTCTGCAATCCTACATAGCTTTATAGTCTATTTATAACTGGGCCTAGCCAAACTTAACATAAGAGCAGACCTGAGTTCAATATTATTTGAAATAAAATACTTTTAGCATTTGCTCTAGTCTGCCCGGGGTGTCAGATTGGTGCAGTTTGCACTTTtgtgactattctattggttccattgtgccaggcaagctcaatcacgCCTAGATAAAGTATTTaacatgatttcaaatagtatttgaaccctggTCTACTACATGTAAGAGTGATATGtggatatactgtatgtcatgtGGTAGTATGTTTTAAGGGAGTCATGCAAAGGAGAGAGGTATTGGGAAATTCTTCAAGCTACGTTTGGGAAAGCAGAAAACACATTTCCTTCCTTCATCCGCTGTTAGAACTGTGTAAATATTGTGAATAAAACACAGAGCTTTGGCTCCTCTTGTAAGTTAATGTATATATCCTACAGATGTTTCTTCTTCTCATGCGTCTACTCATTGGATATGGCTTTATAAAATGTTGTTCTTTTCAATGTGTTATCGTTCTGTATGTTTCAAGTTGCATGTCATGAGAATGACTGTTTTGCTTGTGTTCAGTTTGGTTTAAGAGTGGCATGAGACTTTAAGAGAGGAAGCAGGAACGGTATTGAGGAGCGATATTGTCAGCATGTGTCTCTAAATGTGTAGACGTGTACTGGTGTCTTCATTTCAGGAGTGAACGGTTATGGGCCTGTATTCAAAAAGCGTCTCTGagtgggagtgctgatctagaatcaggtccccCTGTCTATAATcacattcattatgatctaaaaggataAAACTGATCCAGCACGCCTACACTGAGACACTTTATGGATAGAGGCCTAGTTCAAAAGATGATCAGGGTCTATCCTAAACCGGAGAAGCGTCATCTGTTGTGTTTTCCAGACATTGTGAAACTACATGTAAATGTGTGACTTAATATCCGTTTCCTCCATAAAGATTAATATAAAGAATGATATGAATCCTCCCTAGA
>XM_036957012.1
AGGATCTTACTGCGTAAAACACAGACCACTGTAGCTGCTCTATGTGCTATGATGGAAACACTTCGAAGTTTTAGTTCGGATTGAGAAATATCAACTTGATTCGTTTCCACTGAAGGCAACGGGATAAAATATTGACACGTCAAAATACATCGCAGTCGGGCTTTAATTGCGTTCATTTAATTGCATTGGGCGACGTTGTGAGACATTTTGAGCCATTCATTCCAAAGTCCTCTTTACAGTATGAGGTGCAGTTATGGCAAGCAGTAGTAAGAAGTCAGTGGCGAGGACCCTGGAGGATCTGACGCTTGATTCTGGTTATGGTGGAGCAGCAGACTCCTTTAGGTCTTCCAGTGCTTCACTGTGCTGTTCCGAGGCACATATACCTTATGCGCATGGGGGGAATGTTTGGCATTTAACCGACTCCATGCACAGTCGCCACAACAGCCTGGACACGGTCAACACAGTCTTGGTCGAAGACTCCGATATCCTGGATTGCTCCGGACAGTGCGCTAAACTACCCGAGCTCGAGGACGTGCCATGGAGCCTCGGGGAAGTAGAGAGCGCACTGAACAAGGACGAAGAGTTGAGGCTGGGGGTCGTGTCACAGGAGATCCTGGCTAGGCTCTCGGTCCTCATAAGCCGCGCACTCGTGAGGGTCGCCAAGGAAGCGCAGCGCCTGAGTTTGCGCTATGCCAAATGCACCAAATACGAGATTCAAAGTGCCATAAAGGTTGTCATGTCTTGGACAGTCTCGGTGAACTGCATCACCGCCGCACTCAGTGCCTTGTCTATGTACAACATGAGCACCGAGGACAAGTTCAGCCGCGGAAAGTCACTCAGATGCGGACTCATTTTCAACGTGGGGAAGTTCTTCAGGTGGATGGTGGACAGCCGAGTTGCGGTGAGGATCCACGAGCACGCTGCCATCTACCTGACAGCTTGCATGGAGAGTCTTTTCCGAGAGGTGTACGCACGCGCACTGCGCAGCGCACTTGTGGAGAAAGATAATGGGATCCCTAAATTCACTGTTGAGTCCCTCGAACAGGCCATCAACAACGATTCGGAGTTATGGGGGTTCCTGCAGCAGTATCAATACCTCATTTGTGGGAAGAATGCAAGTGGTGTGCTCAGCCTACCAGAGAGCCTGACTCTGCATCGGGACCAGCAGCGGTCAGGGAAAAGTGGGGAGGGCCACTCCTACAGTCAGTCGGAGCTGCGCTCCATCGAGCAGTGCCTGCTAGCCACACGGGTGGGCAGCATCTCAGAACTCAGTGACCTGGTCTCCCGGGCCATGCACCACCTCCAGCCGCTGCATGTGAAGAACCATAGCAACGGGACGCCCATCCACCAGAAGAGCAGCCCAGTACACTGGGAGCCTGAGGCGCTCTACACTCTCTGCTACTTCATGCACTGTCCCCAGGTGGAATGGGAGAACCCCAACGTAGAACCCTCTAAGGTTACCCTGCAGACAGAGAGGCCGTTCCTGGTTCTACCTCCTCTGATGGAGTGGCTCAGGGTGTCGGTGGCCCACGCAGAGCACCGCCGTAGCTTCTCAGTGGACAGTGACGACGTCCGGCAGGCCGCCAGGCTGCTGCTGCCAGGGGTGGACTGTGAACCACGCCAGCTCAAGACAGATGACTTCTGTGCATCCAGGAAGTTGGATGCAGCATCCACAGAGGCTAAGTTCCTCCAGGACCTGGGATTCCGTATGCTCAACTGTGGCCGGACCGACCTGGTCAAGCAGGCTGTCAATTTGCTGGGGCCTGACGGCATCAACAGCATGAGTGAACAGGGAATGACCCCTCTGATGTACTCCTGTGTGAGAGGGGATGAAGCAATGGTCCAGATGCTGCTGGACGCTGGAGCCGACATCAACAGTGAGCTGCTCCTGGATGCCCGGGCCAACGTAGAGGGCTCCCTACAGGACGGTATGGAGAACTACACAGAGACCCCGCTACAGCTTGCCTCCGCTGCAGGTAACTTTGAGCTGGTCAGTTTGCTgttggagagaggagcagaccccATGGTGGGAACCGTGTATCGTAACGGTATCTCTACTGCCCCTCATGGAGACATGAACTCCTACAGTCTAGCTGCAGCACATGGACACAGGAATGTGTTCCGCAAGCTGCTGTCCCAGAcggagaaggggaaaggggacGTGCTGTCCCTGGAGGAGATCCTTgctgaggggacagaggaagaaAGGGGCCTGGAGGAGAGGAACCCCTCCCAGCTGGACCTGGTCCGGACCGGCAAGGCCAAGCTCAAGGCCCTGAGAGAGGCCATGTACCACAGCTCTGAACACGGACATGTGGATATCACCATCGACATACGCAGCCTAGgGGTCCCCTGGACGCTGCACACCTGGCTGGAGTCTCTGCGGACGTGTTTCCTGCAGCATCGGAGACCACTGATCCAGGGCCTGCTCAAGGAGTTCAGCTgtattgaggaggaggagtacACACAGGAGCTCATCACCCACGGCCTGCCACTCTTGTTTCAGATCCTACGAGCCAGCAAGAATGAGGTGATCAGCCAGCAGCTGTCTCTGATCTTCACCCAGTGCTACGGACCGTACCCCATCCCCAAACTCCCTGAGATAAAGAGGAAACAGACCTCACGCCTGGATCCTCATTTCCTAAACAACAAGGAGATGTCAGATGTGACCTTCTTGGTGGAGGGGAAGCCATTCTACGCCCACAAAGTCCTGCTCTTCACCGCCTCTGGCAGGTTTAAGTCTCTACTGGCGAACAGACCAGCTGCTGAAAACACATGTATTGAAATCAGCCACGTCAAATACAACATATTCCTGCTGGTGATGCAATACCTCTACTGTGGTGGGACGGAGCATCTGCACATCAGAAACACAGAGGTTATGGAGCTGCTGTCAGCGGCCAAGTTCTTCCAGCTGGAGGCGCTGCAGAGGCACTGTGAGATCATCTGCTCTAAGAACATCAACACAGAAACCTGTGTGGAGATCTACAGCCACACCAAGTTCCTGGATGTCCCAGATTTGGCTGTCTACATCGAGGGCTACTTCCTGAAAAACATGGTGGTGCTGATTGAGCTGGAGCCCTTCAAAACACTGTTGTACGACACGCCTCCAGACAGTCCCGCCACCGATGTACTCCTGGACCTGGAGAAGACCCTGGGCATCCGCATCCAGTCCATCCACCTGTCCTCCTCCAAGGGCTCCATTGTCTGATTGGTTGATTTATTGAGCTGCTAATGGGActggaactgtctgtctgtcaccattGACCCCAGTTCAACACATAGCTGTACTGAACCACACTCAACAGTGACACTTTTAAATTGCTTGCTGTGCTAACACGCTATTGCCATTCTCCTGCAGCCTACTGAGCTTTGGGCCGAGCACTTAGGCAAATGGACAGCGCTGGAACCCCAGAAATTGTGAAAAGGAGATTTTCATAGGGCTGAAGTAAAGCTGACTCATCACAGCAATAGTGGGACTATATCGCTGAGATGCAgtgaggaatgtgtgtgtgtgtgtgtgtgtgtctggaatcATTCGTAAAGCCCCGGCCAACATTACTTCGCTCCTTGACATTAGTCTCCAGACTGCAGTCAGACCTGCCATTACTCCACGTGTCTACTGGGCAGAATCATTGTTGGTACTTTTCTCAGCATGGTTCTGCAATCCTACATAGCTTTATAGTCTATTTATAACTGGGCCTAGCCAAACTTAACATAAGAGCAGACCTGAGTTCAATATTATTTGAAATAAAATACTTTTAGCATTTGCTCTAGTCTGCCCGGGGTGTCAGATTGGTGCAGTTTGCACTTTtgtgactattctattggttccattgtgccaggcaagctcaatcacgCCTAGATAAAGTATTTaacatgatttcaaatagtatttgaaccctggTCTACTACATGTAAGAGTGATATGtggatatactgtatgtcatgtGGTAGTATGTTTTAAGGGAGTCATGCAAAGGAGAGAGGTATTGGGAAATTCTTCAAGCTACGTTTGGGAAAGCAGAAAACACATTTCCTTCCTTCATCCGCTGTTAGAACTGTGTAAATATTGTGAATAAAACACAGAGCTTTGGCTCCTCTTGTAAGTTAATGTATATATCCTACAGATGTTTCTTCTTCTCATGCGTCTACTCATTGGATATGGCTTTATAAAATGTTGTTCTTTTCAATGTGTTATCGTTCTGTATGTTTCAAGTTGCATGTCATGAGAATGACTGTTTTGCTTGTGTTCAGTTTGGTTTAAGAGTGGCATGAGACTTTAAGAGAGGAAGCAGGAACGGTATTGAGGAGCGATATTGTCAGCATGTGTCTCTAAATGTGTAGACGTGTACTGGTGTCTTCATTTCAGGAGTGAACGGTTATGGGCCTGTATTCAAAAAGCGTCTCTGagtgggagtgctgatctagaatcaggtccccCTGTCTATAATcacattcattatgatctaaaaggataAAACTGATCCAGCACGCCTACACTGAGACACTTTATGGATAGAGGCCTAGTTCAAAAGATGATCAGGGTCTATCCTAAACCGGAGAAGCGTCATCTGTTGTGTTTTCCAGACATTGTGAAACTACATGTAAATGTGTGACTTAATATCCGTTTCCTCCATAAAGATTAATATAAAGAATGATATGAATCCTCCCTAGA

Function

symbol description
btbd11 Predicted to enable protein heterodimerization activity. Predicted to be involved in SMAD protein signal transduction. Predicted to be integral component of membrane.

NR:

description
PREDICTED: ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X2

GO:

id name namespace
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K10483 BTBD11; BTB/POZ domain-containing protein 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036957002.1 False 4777 mRNA 0.51 17 83241269 83344652
XM_036957012.1 True 4675 mRNA 0.51 16 83241269 83344652

Neighbor

gene id symbol gene type direction distance location
LOC110497849 mterf2 coding upstream 25021 83214229 ~ 83216248 (+)
LOC110502176 cry1 coding upstream 36468 83203362 ~ 83204801 (+)
LOC110497837 tmem263 coding upstream 117473 83119221 ~ 83124965 (+)
LOC110497829 LOC106561410 coding upstream 122669 83116088 ~ 83118600 (+)
si:dkey-103i16.6 LOC106561415 coding upstream 238400 82978247 ~ 83002869 (+)
LOC110502210 LOC106561405 coding downstream 32995 83377647 ~ 83395033 (+)
LOC110497881 LOC106561403 coding downstream 56307 83400959 ~ 83408768 (+)
LOC110497890 LOC106561402 coding downstream 65561 83408936 ~ 83422350 (+)
LOC110497903 LOC106561401 coding downstream 88566 83433218 ~ 83471783 (+)
LOC110502224 LOC106561400 coding downstream 153497 83498149 ~ 83611296 (+)
G193954 NA non-coding upstream 23723 83217122 ~ 83217546 (+)
G193930 NA non-coding upstream 53846 83187193 ~ 83187423 (+)
G193923 NA non-coding upstream 60920 83180018 ~ 83180349 (+)
G193916 NA non-coding upstream 73962 83167098 ~ 83167307 (+)
G193912 NA non-coding upstream 76401 83164540 ~ 83164868 (+)
G194224 NA non-coding downstream 5265 83349917 ~ 83357420 (+)
G194228 NA non-coding downstream 21379 83366031 ~ 83368104 (+)
G194241 NA non-coding downstream 51130 83395782 ~ 83397649 (+)
G194263 NA non-coding downstream 85016 83429668 ~ 83429868 (+)
G193339 LOC106561425 other upstream 586839 82652633 ~ 82654430 (+)
LOC110497686 NA other upstream 819087 82417794 ~ 82426875 (+)
G193170 bhlh3 other upstream 837434 82401113 ~ 82403835 (+)
LOC110497665 LOC106561427 other upstream 852748 82366183 ~ 82393779 (+)
G194395 NA other downstream 214268 83558920 ~ 83559598 (+)
G195155 NA other downstream 1251758 84596410 ~ 84600324 (+)
LOC110498034 LOC106573178 other downstream 1665812 85010068 ~ 85054392 (+)
G197069 NA other downstream 2790964 86135616 ~ 86136608 (+)
G198417 LOC106561459 other downstream 3692859 87037511 ~ 87039236 (+)

Expression


Co-expression Network