XLOC_020710


Basic Information

Item Value
gene id XLOC_020710
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 2049612 ~ 2302229 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042265
CTAGATGAAAAGACAGAACAATGACAGCTTTATTTATAGCTGGGGATAATGCTAAATGTGAATTAGTGCGCAGATGTGCTTTAAATTATCGGAATTCATCAACAGACACACGTTCAGCTGTGAAATCTGATGTCTGGTGAATACAGGAGAGTTTTCAGGAAGGTAAATCTAATATGTTAAACGCTTTCCTAATGAACACGACTAAGGCTTCTCCTTTGCATGAACTCTGAGGTGGACCCTCAGTTCATAAGGCCTCAAAAATGCTTTACCGCAGTGATCACATTGGTGacttttctctccagtgtggatcagcatGTGCTGATAAAAGGATGATGACTGTCTGAAACTCTTCcaacactgagtacatgtgaacggcttctctccagtgtggatcagcatgtgttgattaagggatgacgACAGtctgaagctcttcccacactgagcacAAgtgaacggcttctctccagtgtggatcatcatgtgatgcTTGAGGCTGAATTTCtgcctgaaactctttccacactgagtgcaggtcaaACCTTTAACAGCTGCTCTATCCACTGAAATACTGTGTTCAGTCTCTGATTGAGTTTCTTCTTCACtcttgacatgatgtttctcctcatctccactcagttcttcactctcctccttcaccaTCACTTCTGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042265 True 672 lncRNA 0.43 2 2049612 2302229

Neighbor

gene id symbol gene type direction distance location
XLOC_020708 NA coding downstream 28139 1960038 ~ 2021473 (-)
XLOC_020709 NA coding downstream 35279 1994728 ~ 2014333 (-)
XLOC_020707 NA coding downstream 46670 1944933 ~ 2002942 (-)
XLOC_020706 NA coding downstream 88907 1924305 ~ 1960705 (-)
XLOC_020705 NA coding downstream 231396 1799199 ~ 1818216 (-)
XLOC_020722 NA coding upstream 164044 2466273 ~ 2482489 (-)
XLOC_020723 NA coding upstream 164110 2466339 ~ 2496857 (-)
XLOC_020724 NA coding upstream 169035 2471264 ~ 2524501 (-)
XLOC_020725 NA coding upstream 218703 2520932 ~ 2539642 (-)
XLOC_020726 NA coding upstream 226554 2528783 ~ 2538625 (-)

Expression


Co-expression Network