XLOC_020711


Basic Information

Item Value
gene id XLOC_020711
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 2061685 ~ 2223987 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042266
TTGCCGCACTGATCACATTTGTGTttcttctctccggtgtggatcatcatgtgctGATGAAGGTTTGATAACTGTgtgaagctcttcccacactgactacatgtgtacggtttctctccggtgtgagtcaTCTCATGTACTTTCAGTACACTTAAGTGACCGAATCTCttgttgcagtgtgaacacacgtactgtctctctccagtgtggatcatctggTGCAGTCTCAAGTGCGCAGCTGTaacaaaactcttcccacactccaAGCACACAAACTCTTTCACaccggtgtggatcttctgatgtctTCTTAAACTCGACTGTcgtgtaaaactctttccacacacagAGCACACAAACTCTTTCACACCGGTGTGGGTTTTCTGGTGTTGTTTCAAATTTGACAGCACCGtataactctttccacactcagaacATGAATAGGGCCTCTCGTTTGTATGAACTCTAAGATGATCCTTCagctttgaaaaaataaaaaatgttttgccgCACTGATCACACCTGTGtgatttctctccagtgtggatcatctcaTGTCTTTTCAGGTTTCCCAAACGATTGAATCtcatgtcgcagtgtgaacacgtgtaaggtttctctccagtgtggatcatcatatGAAGGTGGACATCATGTTTGCTCTtcaagctctttccacactgagtgcaggtgaaacctTTTCCAGCTGTTCCCTCCATTAAAATACTATGTTCGATCTTCAATtgagtttcactttcacttttgacatgatgtttc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042266 True 777 lncRNA 0.43 2 2061685 2223987

Neighbor

gene id symbol gene type direction distance location
XLOC_020708 NA coding downstream 40212 1960038 ~ 2021473 (-)
XLOC_020709 NA coding downstream 47352 1994728 ~ 2014333 (-)
XLOC_020707 NA coding downstream 58743 1944933 ~ 2002942 (-)
XLOC_020706 NA coding downstream 100980 1924305 ~ 1960705 (-)
XLOC_020705 NA coding downstream 243469 1799199 ~ 1818216 (-)
XLOC_020717 NA coding upstream 774 2224761 ~ 2228252 (-)
XLOC_020718 NA coding upstream 10002 2233989 ~ 2275936 (-)
XLOC_020719 NA coding upstream 29551 2253538 ~ 2259552 (-)
XLOC_020720 NA coding upstream 33936 2257923 ~ 2267553 (-)
XLOC_020721 NA coding upstream 42219 2266206 ~ 2348036 (-)

Expression


Co-expression Network