LOC110498034 (LOC106573178)



Basic Information


Item Value
gene id LOC110498034
gene name LOC106573178
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 85010068 ~ 85054392 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036957441.1
GGTGGTGGTGCCATGTCTTCCAAGCATCAAGACTTGCTTCCTGTCTTATCATCGCATTCAACCAGAGTAAAGTTGAACTTTATATAATAAGCTGCTTTGCAATTCGACAAAGTGGCAATTAGATCAAGCAAAGCGTGAGCTCTTCTACGTTTTGGAGCTGCCTGCGCTGAAATGGGCTCATTAGAGGACAACTGCGCTATTAATAGGCTTAGTTAAATAGGCAATAGGCAATGCTTGCAATAGTTTCGTGGAAAATGAGCTGACATGAACATCTATGAGGCCTGATCAAGACATCACAGCAATAGGGACGTTGGATTATATTTTTAGAAACCAATTGTGTTCATAAATCTGATGGGAACATTTCTGCTAGTGTGCGTCGCACCTGCTCTGGAGCAGTGTACACCGCTGGAGAATATGGAATGCCGTTTAATGGATTCCTTTTGCCCAAAGGTTGCAAAGTGAAGAGTGGTTGCTTTATGCTCTCCTAGAAAGCACATGTGAGATAGGTAACTTTTGCACTCTGGATTCCAGAACACGTTTATCTGCTAAAACGGGTTGCTATTCTTGTGGGACTTTATGTACTCTTTTCATCTTTGAATTGTAAGAGCCATTTTGTAAAATGTCATGATGTGGAACATTTTTGACAAACAGAACTCCGACTAAATCCTTAaatatatgcaatttcatcctaTTTTTATCCATATCGAGACACCATCTCTGTGGCTCTTATGGGAATGAAACACTCCTCCCGCTGTATGCTCCTCAGGAGAAAAATGGCGGAGTCCGAGAGCACTGAGCAGCAGCCACAGCCAATCCGCATCATCCAGTCTCAGCGCGTGCAGCCAACCTCGCTGCCCAAGCCTGTGCCCTCCATCCACCATGTCCCACAGCCGCCCCATACGCCCCACGCTGCCTCCCTGCCCAGCTGCCCTGGCCGGGGGAAGATGGCCAAGTTCCTCAACCCTGAGGAGATGACCTCCAGGGACTACTACTTTGACTCCTACGCCCACTTTGGCATCCATGAGGAGATGCTGAAGGACGAAGTGAGGACGCTGACCTACAGAAACTCCATGTACCACAACAAGCACGCTTTTAAAGACAAAATCGTCCTTGATGTGGGCAGTGGGACTGGTATCCTGTCCATGTTTGCAGCCAAGGCAGGAGCCAAGCACGTGTATGGGATTGAATGTTCCAGTATATCGGAATACTCTGAGAAAATCATCAAGTCTAACCACCTGGACAGTGTTATCACCATCTTCAGGGGCAAGGTGGAGGAAGTGGAGCTGCCAGTAGAGAAGGTTGACATCATCATCTCCGAGTGGATGGGCTACTGTCTCTTCTACGAGTCTATGCTCAATACCGTAATCTTTGCAAGGGACAAGTGGCTGAAACCCGGCGGTCTGATGTTTCCAGACCGTGCTGCATTGTATGTGGTGGCCATCGAGGACAGGCAGTACAAGGACTTCAAAATCcactGGTGGGAGAACGTGTATGGCTTTGACATGACCTGCATCCGTAACGTGGCCATGAAGGAGCCCCTGGTGGACATAGTTGACCCCAAACAGATGGTCACCAACTCCTTCCTGATCAAGGAGGTGGACATCTATACAGTGAAGACTGAGGACTTGTCCTTCACCTCAGCCTTCTGCCTTCAGATCCAGAGGAACGACTACATCCACGCCCTTGTCACCTACTTTAACATCGAGTTCACCAAGTGTCACAAGAAGACTGGCTTCTCCACCGCCCCTGATGCTCCGTACACACACTGGAAACAGACAGTGTTCTACCTGGAGGACTACCTGACtgtgaggagaggggaagagatcaTTGGCAGCATCAACATGAAGCCCAACGACAGGAACATACGGGACTTGGATTTTACCTTTGAGTTGGATTTCAAAGGACAGTTATGTGAGGCAGCCATCTCCCACGACTACAAGATGCGTTAGCTAGGTGTCCAGCAGGGAGAACCGGTGTGCAGTGCTGCCTGCAGCCccacagagggaggcagaggcacCCCCCTTAACAACAGAcactgaggagagagaatggggtggagggagatgagagagtggGATGGAAGAATGCGAGAGGTTGGGATGGAGGGACGAGATGGTGGGAGGCAGGAATCAAagaggagatagatagatggagagaaatgGTGGGATGGGCCAGATCAGAGGAATCAGGTGACGATGAGAGAAGAGTACAGGGGTGGCACTCCAAGCAATATCAACATGCACATCAACACCTCTCACTGGCACTTTTTTcatttgcattttttttattgaacctttttatttagctaggcaagtcctAACTGTTAGGCCAACCGTTCAAAGGACAACTTTGAATGTAACACCTCGTGAATTCAAGAATGTTCTAGTCATAATGAATGTTATTTATTATTTATCTATATTGTATGTTATCTTGATTTTGTTAATTGTTCTTCCAAAATAACCAGGCCACAGGATTAGTTAGCACTTTTTAAAATGTCTTAATTTTCCCCCCTTTTTGGAGAAAATATTTTCTGTGAGCTTCAGTGTTTGGAGCCCATTATGATCAATTACTGCAGTTACTGTACTTTGCATATATATTGCATATAATGATACTTTTTAATATTCTACATCCTAGGCCAGTTTCTTCTATCTTCAAATATACTTTTAAATTACCCAATTTTGCATGTTTGCAAATAATCTTCACCATATCTGGTAGTGCAGTAATTAAATGTATCGGCCAAGAAAAATTCAGTGCTGCATAATGTATGTGTAACGatgtgaatgagagtgtgtgtttgcAATCAGGTCATGTAATGTAGCTTTTTGGGGGTGTGCAATATAACAGTATGAGCGCTCATACATTTGCGCAGCTTGCACTCCAAAGTGTGGTCTGTGGTTTCTGTTAGAGCTGTGATGTCGGCGTTGTAATCAGCATTGTCTGCGGCTCTTGTCTAGATGCCTGCAAAAGCTCCTGATTACAAGGCCTACCCCACTGGGCAGACACTGATCTTCAATAATAACCATTGTCTCTTAAATTCTGTGTACACACTGAAGCCATACCAAGAAGTGGCGAATGTGCCGAAGCATTCAGTGGGTGGGGCCTCACTTCGGTAGCTGCTGCTCACTGAACTTCTCTCAACTTGAGGGCATTGTAGTTACCATGCTTTCCCTGGCTCTGCTGATCTCGGGTCAGTGACTGGCTTGTCCTCAGAGCCTGGCCTAGCAACTGTCAGCAGTGGTCCTGTCCTTAGATCAGTAGCAGACAGTTCATTCCAGCCTCTGCTCAGCGCTGGAGTTGGACTCTCAGGCGGCAGCTCCTTCCCTTCACCTGTGCTCTTACTAACTCTTAAGGTCATCGCCAAGGCAACAACTGGAGGTGTCCTCCAGTCCAACTGTGTGACCTCCCCTCACAGTTGTGTAGTACTGTTACACCATCCTTCCTCACCAAAGACGTTCTATCTGCAGCCAAGATACAGACTCACTTCCAGTCCCCTCGCTCTTCCATGCCTCTCAATGAAGCTCATCAGCACAACACTTATGACTGTTCAGAAGACGTAGTGTGACATGCCATGTATGAATAGACTAGTGGCTAGTAATGAGTGAGTGACATTTGGCTCATGCAGACTCTTTACGGAACAGATTGTACGTTTTGATCTAGAAGGGCAGGGACCGGTAGTTTCATGTTGACAGAGCTGTCTCTTGTGAGCAGATAGTATGTCTTTCTTACCTGTTTTGCTTTTGATCCAGTAtcaatgtgtgtatgtatagcACAGCGTGTGAAATATAATAAAAAAGCAGAATAATGTGAAGAAAATCTAACTGAAATAGTATCCACTAAGTAGATTGTGTGCAATAGCAAGTCAGTGATTTAAGCTAACTAACTTTAAAGTTTACCCTTCAGCAGATATACCACTTGATAAGTGTTATTCCTGTTTACCACTCATGGCATTCATTTAAATATTTACACCTGGTAACCTGCCTAAGTACTAAAATGTGGTTAACACTATTTAATTCAAGTCAGCTACTGAAATTGTGCTATGTTCATTTTGTATGGCAATTCCATTTTCTATAGAGTTTAAAAATAGTGCTATTCAAGCATTGTATTGTTCATTTGACCAACTGTCGTGTaagagttaaataaaagttaagcTAAA
>XM_036957448.1
GGTGGTGGTGCCATGTCTTCCAAGCATCAAGACTTGCTTCCTGTCTTATCATCGCATTCAACCAGAGTAAAGTTGAACTTTATATAATAAGCTGCTTTGCAATTCGACAAAGTGGCAATTAGATCAAGCAAAGCGTGAGCTCTTCTACGTTTTGGAGCTGCCTGCGCTGAAATGGGCTCATTAGAGGACAACTGCGCTATTAATAGGCTTAGTTAAATAGGCAATAGGCAATGCTTGCAATAGTTTCGTGGAAAATGAGCTGACATGAACATCTATGAGGCCTGATCAAGACATCACAGCAATAGGGACGTTGGATTATATTTTTAGAAACCAATTGTGTTCATAAATCTGATGGGAACATTTCTGCTAGTGTGCGTCGCACCTGCTCTGGAGCAGTGTACACCGCTGGAGAATATGGAATGCCGTTTAATGGATTCCTTTTGCCCAAAGGTTGCAAAGTGAAGAGTGGTTGCTTTATGCTCTCCTAGAAAGCACATGTGAGATAGGTAACTTTTGCACTCTGGATTCCAGAACACGTTTATCTGCTAAAACGGGTTGCTATTCTTGTGGGACTTTATGTACTCTTTTCATCTTTGAATTGTAAGAGCCATTTTGTAAAATGTCATGATGTGGAACATTTTTGACAAACAGAACTCCGACTAAATCCTTAaatatatgcaatttcatcctaTTTTTATCCATATCGAGACACCATCTCTGTGGCTCTTATGGGAATGAAACACTCCTCCCGCTGTATGCTCCTCAGGAGAAAAATGGCGGAGTCCGAGAGCACTGAGCAGCCACAGCCAATCCGCATCATCCAGTCTCAGCGCGTGCAGCCAACCTCGCTGCCCAAGCCTGTGCCCTCCATCCACCATGTCCCACAGCCGCCCCATACGCCCCACGCTGCCTCCCTGCCCAGCTGCCCTGGCCGGGGGAAGATGGCCAAGTTCCTCAACCCTGAGGAGATGACCTCCAGGGACTACTACTTTGACTCCTACGCCCACTTTGGCATCCATGAGGAGATGCTGAAGGACGAAGTGAGGACGCTGACCTACAGAAACTCCATGTACCACAACAAGCACGCTTTTAAAGACAAAATCGTCCTTGATGTGGGCAGTGGGACTGGTATCCTGTCCATGTTTGCAGCCAAGGCAGGAGCCAAGCACGTGTATGGGATTGAATGTTCCAGTATATCGGAATACTCTGAGAAAATCATCAAGTCTAACCACCTGGACAGTGTTATCACCATCTTCAGGGGCAAGGTGGAGGAAGTGGAGCTGCCAGTAGAGAAGGTTGACATCATCATCTCCGAGTGGATGGGCTACTGTCTCTTCTACGAGTCTATGCTCAATACCGTAATCTTTGCAAGGGACAAGTGGCTGAAACCCGGCGGTCTGATGTTTCCAGACCGTGCTGCATTGTATGTGGTGGCCATCGAGGACAGGCAGTACAAGGACTTCAAAATCcactGGTGGGAGAACGTGTATGGCTTTGACATGACCTGCATCCGTAACGTGGCCATGAAGGAGCCCCTGGTGGACATAGTTGACCCCAAACAGATGGTCACCAACTCCTTCCTGATCAAGGAGGTGGACATCTATACAGTGAAGACTGAGGACTTGTCCTTCACCTCAGCCTTCTGCCTTCAGATCCAGAGGAACGACTACATCCACGCCCTTGTCACCTACTTTAACATCGAGTTCACCAAGTGTCACAAGAAGACTGGCTTCTCCACCGCCCCTGATGCTCCGTACACACACTGGAAACAGACAGTGTTCTACCTGGAGGACTACCTGACtgtgaggagaggggaagagatcaTTGGCAGCATCAACATGAAGCCCAACGACAGGAACATACGGGACTTGGATTTTACCTTTGAGTTGGATTTCAAAGGACAGTTATGTGAGGCAGCCATCTCCCACGACTACAAGATGCGTTAGCTAGGTGTCCAGCAGGGAGAACCGGTGTGCAGTGCTGCCTGCAGCCccacagagggaggcagaggcacCCCCCTTAACAACAGAcactgaggagagagaatggggtggagggagatgagagagtggGATGGAAGAATGCGAGAGGTTGGGATGGAGGGACGAGATGGTGGGAGGCAGGAATCAAagaggagatagatagatggagagaaatgGTGGGATGGGCCAGATCAGAGGAATCAGGTGACGATGAGAGAAGAGTACAGGGGTGGCACTCCAAGCAATATCAACATGCACATCAACACCTCTCACTGGCACTTTTTTcatttgcattttttttattgaacctttttatttagctaggcaagtcctAACTGTTAGGCCAACCGTTCAAAGGACAACTTTGAATGTAACACCTCGTGAATTCAAGAATGTTCTAGTCATAATGAATGTTATTTATTATTTATCTATATTGTATGTTATCTTGATTTTGTTAATTGTTCTTCCAAAATAACCAGGCCACAGGATTAGTTAGCACTTTTTAAAATGTCTTAATTTTCCCCCCTTTTTGGAGAAAATATTTTCTGTGAGCTTCAGTGTTTGGAGCCCATTATGATCAATTACTGCAGTTACTGTACTTTGCATATATATTGCATATAATGATACTTTTTAATATTCTACATCCTAGGCCAGTTTCTTCTATCTTCAAATATACTTTTAAATTACCCAATTTTGCATGTTTGCAAATAATCTTCACCATATCTGGTAGTGCAGTAATTAAATGTATCGGCCAAGAAAAATTCAGTGCTGCATAATGTATGTGTAACGatgtgaatgagagtgtgtgtttgcAATCAGGTCATGTAATGTAGCTTTTTGGGGGTGTGCAATATAACAGTATGAGCGCTCATACATTTGCGCAGCTTGCACTCCAAAGTGTGGTCTGTGGTTTCTGTTAGAGCTGTGATGTCGGCGTTGTAATCAGCATTGTCTGCGGCTCTTGTCTAGATGCCTGCAAAAGCTCCTGATTACAAGGCCTACCCCACTGGGCAGACACTGATCTTCAATAATAACCATTGTCTCTTAAATTCTGTGTACACACTGAAGCCATACCAAGAAGTGGCGAATGTGCCGAAGCATTCAGTGGGTGGGGCCTCACTTCGGTAGCTGCTGCTCACTGAACTTCTCTCAACTTGAGGGCATTGTAGTTACCATGCTTTCCCTGGCTCTGCTGATCTCGGGTCAGTGACTGGCTTGTCCTCAGAGCCTGGCCTAGCAACTGTCAGCAGTGGTCCTGTCCTTAGATCAGTAGCAGACAGTTCATTCCAGCCTCTGCTCAGCGCTGGAGTTGGACTCTCAGGCGGCAGCTCCTTCCCTTCACCTGTGCTCTTACTAACTCTTAAGGTCATCGCCAAGGCAACAACTGGAGGTGTCCTCCAGTCCAACTGTGTGACCTCCCCTCACAGTTGTGTAGTACTGTTACACCATCCTTCCTCACCAAAGACGTTCTATCTGCAGCCAAGATACAGACTCACTTCCAGTCCCCTCGCTCTTCCATGCCTCTCAATGAAGCTCATCAGCACAACACTTATGACTGTTCAGAAGACGTAGTGTGACATGCCATGTATGAATAGACTAGTGGCTAGTAATGAGTGAGTGACATTTGGCTCATGCAGACTCTTTACGGAACAGATTGTACGTTTTGATCTAGAAGGGCAGGGACCGGTAGTTTCATGTTGACAGAGCTGTCTCTTGTGAGCAGATAGTATGTCTTTCTTACCTGTTTTGCTTTTGATCCAGTAtcaatgtgtgtatgtatagcACAGCGTGTGAAATATAATAAAAAAGCAGAATAATGTGAAGAAAATCTAACTGAAATAGTATCCACTAAGTAGATTGTGTGCAATAGCAAGTCAGTGATTTAAGCTAACTAACTTTAAAGTTTACCCTTCAGCAGATATACCACTTGATAAGTGTTATTCCTGTTTACCACTCATGGCATTCATTTAAATATTTACACCTGGTAACCTGCCTAAGTACTAAAATGTGGTTAACACTATTTAATTCAAGTCAGCTACTGAAATTGTGCTATGTTCATTTTGTATGGCAATTCCATTTTCTATAGAGTTTAAAAATAGTGCTATTCAAGCATTGTATTGTTCATTTGACCAACTGTCGTGTaagagttaaataaaagttaagcTAAA
>TU222039
TGTACACCGCTGGAGAATATGGAATGCCGTTTAATGGATTCCTTTTGCCCAAAGGTTGCAAAGTGAAGAGTGGTTGCTTTATGCTCTCCTAGAAAGCACATACACCATCTCTGTGGCTCTTATGGGAATGAAACACTCCTCCCGCTGTATGCTCCTCAGGAGAAAAATGGCGGAGTCCGAGAGCACTGAGCAGCCACAGCCAATCCGCATCATCCAGTCTCAGCGCGTGCAGCCAACCTCGCTGCCCAAGCCTGTGCCCTCCATCCACCATGTCCCACAGCCGCCCCATACGCCCCACGCTGCCTCCCTGCCCAGCTGCCCTGGCCGGGGGAAGATGGCCAAGTTCCTCAACCCTGAGGAGATGACCTCCAGGGACTACTACTTTGACTCCTACGCCCACTTTGGCATCCATGAGGAGATGCTGAAGGACGAAGTGAGGACGCTGACCTACAGAAACTCCATGTACCACAACAAGCACGCTTTTAAAGACAAAATCGTCCTTGATGTGGGCAGTGGGACTGGTATCCTGTCCATGTTTGCAGCCAAGGCAGGAGCCAAGCACGTGTATGGGG

Function


NR:

description
protein arginine N-methyltransferase 8-B

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036957441.1 False 4153 mRNA 0.45 10 85010068 85054392
XM_036957448.1 False 4150 mRNA 0.45 10 85010068 85054392
TU222039 True 572 TUCP 0.55 4 85010464 85020034

Neighbor


gene id symbol gene type direction distance location
LOC110498015 LOC106561386 coding upstream 468407 84424371 ~ 84541661 (+)
LOC110498007 LOC106561389 coding upstream 627313 84296556 ~ 84382755 (+)
LOC110497999 LOC106561392 coding upstream 718936 84178072 ~ 84295747 (+)
LOC110497974 LOC106561394 coding upstream 984578 84001080 ~ 84025490 (+)
LOC110497968 LOC106561395 coding upstream 1030243 83823583 ~ 83979825 (+)
LOC110498064 NA coding downstream 137622 85192014 ~ 85194828 (+)
LOC118937296 NA coding downstream 142217 85196609 ~ 85198102 (+)
LOC110498083 LOC106561381 coding downstream 151886 85206278 ~ 85367562 (+)
LOC110498095 fam180a coding downstream 410662 85465054 ~ 85470682 (+)
LOC110498104 LOC106561378 coding downstream 461227 85515619 ~ 85594581 (+)
G195297 NA non-coding upstream 205361 84797236 ~ 84804707 (+)
G195296 NA non-coding upstream 209942 84792567 ~ 84800126 (+)
G195247 NA non-coding upstream 282674 84726686 ~ 84727394 (+)
G195158 NA non-coding upstream 324463 84603952 ~ 84685605 (+)
G196301 NA non-coding downstream 50336 85104728 ~ 85104962 (+)
G196326 NA non-coding downstream 64753 85119145 ~ 85119429 (+)
G196338 NA non-coding downstream 73009 85127401 ~ 85127602 (+)
G196353 NA non-coding downstream 95063 85149455 ~ 85151792 (+)
G196522 NA non-coding downstream 333690 85388082 ~ 85393055 (+)
G195155 NA other upstream 409744 84596410 ~ 84600324 (+)
G194395 NA other upstream 1450470 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 1885103 83119221 ~ 83124965 (+)
G193339 LOC106561425 other upstream 2355638 82652633 ~ 82654430 (+)
LOC110497686 NA other upstream 2587886 82417794 ~ 82426875 (+)
G197069 NA other downstream 1081224 86135616 ~ 86136608 (+)
G198417 LOC106561459 other downstream 1983119 87037511 ~ 87039236 (+)
G198575 NA other downstream 2095810 87150202 ~ 87150490 (+)
G198784 NA other downstream 2439231 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 2481544 87535936 ~ 87536928 (+)
G196095 NA non-coding downstream 30178 85050212 ~ 85056541 (+)

Expression


LOC110498034(LOC106573178) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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LOC110498034(LOC106573178) Expression in each Bioproject

Bar chart with 18 bars.
LOC110498034(LOC106573178) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
End of interactive chart.

Co-expression Network