LOC118936424 (slc25a18)


Basic Information

Item Value
gene id LOC118936424
gene name slc25a18
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 85835960 ~ 85838800 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034309.1
ATGATAGTGACCACACCCATGGAGATGCTCAAGATCCATTTGCAGGACGCAGGAAGGTTGTTTGAGTTCTGTGAACCaCATAAGCATAGTGGTCCAAGCAGAGTGGTCCAAGCACACACTGCAGCTTCTGGTCCAGCTCCTGGTCCATCTCCTCCAGCCCAGCCTGCCCCTCCACCTCGGACCCCTGCCGTCCGTATTACCCTGGAGCTACTGAAGACACGTGGCCTGCCAGGCCTCTACCGGGGAGCAGGAGCCACACTGATGAGGGATTTTCCTTTCTCTATGATCTACTTCCCGCTGTTCACCAACCTGAACACGCTGGGAAGGGCCGAGTAGTCATGGAGACTTGCAGGAGCGGGCCCCATTCCTGCAGTCCTTCACTGCAGGCTGCACAGCCGGATCAGTGGCAGCTGTAGCTGTCACACCACTTGACgtcataAAGACTCGTATACAGACCTTGCAGAAGGGGGAGGACACATACCGTGGCATTGTTGACTGCACACGGAGGATCTGGAGTAAAGGGCCCAGCAACATTCCTCAATGGGGCAACTAGTCGCGCACTGGTCATCGACCCCCTCTTTGGCATCGCACAGGGGGTCTACTTCCTGGGTGTAGGAGAGCAGTTGCTAGGGCTACTGGGATAGCAGCAGCATGTGTCAGTGTCCCTTACAGTACAAAACATACTGCTTCATTCAGCAGTGAATTGAGGGAGAGATTACTCTCCATGGTTCTTATGCAAAGGCTCCTTGACTTTATCATCACTAAGGAAGTTACCAAGCTATCATGGTTTGACAAAAGCACTTTATATGTAAGTGACAAATCCAtcaacatttgtttttaaaagATCAAACATTTTATTTACTAATGTTGTATAATGCTGACTACACTGCCATGAGAAGTCTAAAATGTGTCCGGCAATTCAAAGCAATTGGTCCACCTTTCACAGAGATCCTTTTCGTTTCATGAAAAAGGACAACCTCCACATTGGCTTTTCTCCCCAGTGAGTTTCTTTCCCATCCGTGAGTCCAGAGTTGTAATCTTGGACTCCTCCAGTTAATGCTTTAATCCTAGTCTCTGTACTGTAACCCACTGAACAGCCAGGCTCCTCTCCTACAGGTTAAGACTGTTGGGCCTGCACTCAGAAGTCTTACCTTCCTGTTCTCCACAACTGTAACTGTTAGCTTGTTTTTTAATGCATCTTTGAATTATATGTCATGCAAACAATAAAAATTATGCAAATAAAGCCTTATTTCTGCTGATGGAGTCTCGTCCTAAACATCTTGCATTTATCTTACACATTTTGGAATTCAGCAGAAGTTAGTTTGATGTACAACTTAGTATAGCCTATGATAAGATCCATTTAAAAAAGTACCAGGTTCTTGCCAACGCACTTTGGATTAAGTCCACTAGGTGGCAATGAAAGCATtttgttttatacattttatGATAGGGTTGGAATAACTATTTTATTCTTCATTGGAGAACATCTGAATTGAATGAACAATCTGTGTACAAACAGTGAATATTCATGTTTCTTTGTTGCATATGTATTGTTAATCACATGGGTAACAACAAAAGACATTCATTCTCCAATCCAATA

Function

symbol description
slc25a18 Predicted to enable L-aspartate transmembrane transporter activity and L-glutamate transmembrane transporter activity. Predicted to be involved in L-glutamate transmembrane transport; aspartate transmembrane transport; and malate-aspartate shuttle. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC25A18 (solute carrier family 25 member 18).

NR:

description
mitochondrial glutamate carrier 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034309.1 True 1600 mRNA 0.45 5 85835960 85838800

Neighbor

gene id symbol gene type direction distance location
LOC110502245 NA coding downstream 31607 85803678 ~ 85804353 (-)
bcl2l13 LOC106561371 coding downstream 33008 85766088 ~ 85802952 (-)
dennd11 kiaa1147 coding downstream 87561 85734259 ~ 85748399 (-)
LOC110502240 nup205 coding downstream 109482 85711539 ~ 85726478 (-)
LOC118936851 NA coding downstream 136162 85697420 ~ 85699798 (-)
LOC110498203 NA coding upstream 1374 85840174 ~ 85844254 (-)
ribc2 LOC106561368 coding upstream 76511 85915311 ~ 85920584 (-)
LOC110498224 LOC106561365 coding upstream 82054 85920854 ~ 85926832 (-)
LOC110498255 LOC106561363 coding upstream 103697 85942497 ~ 85948458 (-)
LOC110498273 LOC106561367 coding upstream 109972 85948772 ~ 85952899 (-)
G197441 NA non-coding downstream 81742 85752441 ~ 85754218 (-)
G197424 NA non-coding downstream 90556 85664173 ~ 85745404 (-)
G197394 NA non-coding downstream 151434 85640538 ~ 85684526 (-)
G197328 NA non-coding downstream 352335 85483027 ~ 85483625 (-)
G196784 NA non-coding downstream 383877 85451850 ~ 85452083 (-)
G197552 LOC106561360 non-coding upstream 188090 86026890 ~ 86043305 (-)
G197613 NA non-coding upstream 235473 86074273 ~ 86074839 (-)
G197636 LOC106561359 non-coding upstream 270263 86109063 ~ 86109468 (-)
G197637 NA non-coding upstream 271052 86109852 ~ 86110146 (-)
G197638 NA non-coding upstream 271348 86110148 ~ 86110650 (-)
LOC110498022 LOC106561385 other downstream 1196204 84596433 ~ 84910878 (-)
G195486 LOC106573171 other downstream 1853793 83977965 ~ 83982167 (-)
G195427 NA other downstream 1931509 83881540 ~ 83904451 (-)
G194491 NA other downstream 2219926 83615566 ~ 83616034 (-)
LOC110502187 NA other downstream 2612816 83219964 ~ 83223972 (-)
G197554 NA other upstream 121045 85959845 ~ 85963665 (-)
G198342 LOC100194703 other upstream 1064236 86903036 ~ 86903956 (-)
G198912 NA other upstream 1483339 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 3768037 89606837 ~ 89609890 (-)
G202279 NA other upstream 4538757 90377557 ~ 90441425 (-)

Expression


Co-expression Network