LOC110498203


Basic Information

Item Value
gene id LOC110498203
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 85840174 ~ 85844254 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038576.1
GGACTCATTGACTCAATATGGCCTAACAGAGGATATTTGGAATACAAATACCTTACataatcacagactacaaaatcCTCTCCATCTGGAGTTAAGGGGAGTCCAGGGTTTGTAACCTGACACCAGGTAGTCTGGGGGCCACATTTACCCACTTCAACAACTGGGGTGTGAGAGCCGCTCTCTCATTGGTGCTTTCTGAAAGTCCTCCTCTCCACAAAAATACCATCCATAATGCTTCCACTCTTTGTAAAACAACCTTTTCATTGTGGAAGAAAATAAACACAATAGGCCTAGATAATGAGATAGCAAACATAAAGACAAGCAATAACAGGGTTGGTAAGCCCTGTGTTGTTATGGCAGTAAACATTTAGTCCAGTCTGTCTCTGCATGTAGAATGTACACCTGTTTCCACCTGTTTTACAGTCACTCTGACCTTTGTACCACTCCAAAAGATAAGAACAATTATTCTATCAGTTTGTATTTTTCTCTTGCAAGTTATGCCCTTTTTACATTTTCTTTGTACTGTAATGTGACAACAGATTGTAACACAAAATAAGAAATGTTTGTGAAAAAGTGATATTTACTTTTATGAAAAACTACTGCTGGGATGCAAGTATTTGCCATTGTTGTGACTAATTATCAATGTCAGAAGTTGTAGTCCCATTAACATAAATCAATACTAAAAATCAATACTCATATAAACCAGATAGTTGGAGCAGAGCAGGGTGGAGCTTGTTCTGCTTGACTACCATTGCTGCACACATTGTTGAAGTGAAAGGAACGTGGACAGCTTGATCCTGCTTGTGGGATGCACTGACAGGGGGGACTAGTGTGAATGGAACGGAGCTGAAAGAAAGTTTCACAGAGCGGCTCAGTGAAAGGCATGTGCAGAATGTGACTGACTGGGCACTAGAAAAGACTGAGCTGTAAGATGAAAGGGATCCCGAGGAACGGTTAGGAGGATGGTTGTGGTGGAAGATAAGAACTGAGGAGAAATCAAGAGAATGGTGTCAAAACAAagTCCTTTGGAAATGGTGGATCTCAAACACAACTAAAGGAAACTGacagagaccactgGTATTCCTGTGAGGCACAGCAGAGCAGGAATACTGGCCAGAGGACACCGGTTAAGCTCAGGTGGTGGGTGCCACAAAATACAGGGGAGAGGAACGCTATTGGTTCCCCACCGTGGAAGAACAGACACCACATTGATACCATAGAGGTGGCAAGTTGCATTTGTGCTGGAGACAGATGGGTCGATAAGGGTACGGTAGTGGTGATAACACCTTTGGGCTGAGCTGCTGTGCCgatgggagaaggaggaggaaggaaacCGAAGTGGGCCTGGAGCCCAATGAGAGACAGGATGGCTGAGCAGAAAGTTAGCCTCCCTGCTAAGCTGATTAATGGGGGCGTGACAGGGCTGGTGGGTGTGAGCTGTGTGTTTCGTAATGATCGGGCCAAGACCCGCCTACAGAACCAGCAGGGTGCCCGAGTCCACACCGGAATgagactgaaaatatttgtcatgggtcccctgatcctcaaaagtttctacagctgcacc

Function

NR:

description
mitochondrial glutamate carrier 1-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038576.1 True 1567 mRNA 0.45 6 85840174 85844254

Neighbor

gene id symbol gene type direction distance location
LOC118936424 slc25a18 coding downstream 1374 85835960 ~ 85838800 (-)
LOC110502245 NA coding downstream 35821 85803678 ~ 85804353 (-)
bcl2l13 LOC106561371 coding downstream 37222 85766088 ~ 85802952 (-)
dennd11 kiaa1147 coding downstream 91775 85734259 ~ 85748399 (-)
LOC110502240 nup205 coding downstream 113696 85711539 ~ 85726478 (-)
ribc2 LOC106561368 coding upstream 71057 85915311 ~ 85920584 (-)
LOC110498224 LOC106561365 coding upstream 76600 85920854 ~ 85926832 (-)
LOC110498255 LOC106561363 coding upstream 98243 85942497 ~ 85948458 (-)
LOC110498273 LOC106561367 coding upstream 104518 85948772 ~ 85952899 (-)
dyrk4 LOC106561362 coding upstream 111254 85955508 ~ 85974164 (-)
G197498 slc25a18 non-coding downstream 3487 85831239 ~ 85843493 (-)
G197441 NA non-coding downstream 85956 85752441 ~ 85754218 (-)
G197424 NA non-coding downstream 94770 85664173 ~ 85745404 (-)
G197394 NA non-coding downstream 155648 85640538 ~ 85684526 (-)
G197328 NA non-coding downstream 356549 85483027 ~ 85483625 (-)
G197552 LOC106561360 non-coding upstream 182636 86026890 ~ 86043305 (-)
G197613 NA non-coding upstream 230019 86074273 ~ 86074839 (-)
G197636 LOC106561359 non-coding upstream 264809 86109063 ~ 86109468 (-)
G197637 NA non-coding upstream 265598 86109852 ~ 86110146 (-)
G197638 NA non-coding upstream 265894 86110148 ~ 86110650 (-)
LOC110498022 LOC106561385 other downstream 1200418 84596433 ~ 84910878 (-)
G195486 LOC106573171 other downstream 1858007 83977965 ~ 83982167 (-)
G195427 NA other downstream 1935723 83881540 ~ 83904451 (-)
G194491 NA other downstream 2224140 83615566 ~ 83616034 (-)
LOC110502187 NA other downstream 2617030 83219964 ~ 83223972 (-)
G197554 NA other upstream 115591 85959845 ~ 85963665 (-)
G198342 LOC100194703 other upstream 1058782 86903036 ~ 86903956 (-)
G198912 NA other upstream 1477885 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 3762583 89606837 ~ 89609890 (-)
G202279 NA other upstream 4533303 90377557 ~ 90441425 (-)

Expression


Co-expression Network