LOC110498230 (cecr1)


Basic Information

Item Value
gene id LOC110498230
gene name cecr1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 85908697 ~ 85915458 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021574876.2
TAGCCAGTCGGACATTTTCGAGTTTCCTATTTCCGATTAATACATGAACGCGGCATTACACTTTCAGGCTacggattttgttgttgtttttgtaacAGTTGTTGTTATAGTATAGAGCAGTATAGGAGTACCCATTCATCACTTCACTTTCACGGACAGGTTTGTTCAGTGCCTATCTATTCGGTGTTGACCAACATTGATTAGCCACACCTTCCCCATGTTGCACTGGCCAGAGAGCCACCAGGTGGCTATGGTGTCAGTCCTACTGTGCTGGTTGACCCTGTGCTGGTGCAGCCCTGACCCTAGGCTCAGAGAGTCTCTGATGCACCAGGAGGCCTCCCGGCAGACAGGGGGCAGACTGCTGCTGACAGAGGCAGAGCTGCGGCTCAGTGCACTGCTGCACAAACTGAAGGAGCAGGAGATGAAGAGCTCGGACTTCCCTCCTGCCTTGCACTTCTTCAAGGCAAAGCCACTCATCCAGCGCAGCCTCATCTACAGCCTACTGCAGAGGATGCCCAAAGGAGCAGCACTTCATGTCCATGACTTCTCCATGGTGGGAGTGGAGTGGCTGGTAAGGAATGTGACGTACCGGCCACATTGCTACATGTGCATTACAGAGGACCAGTCAGTTCGATTACTCTTCTCCTCTGGTCAGCCCAAACCAAAACCTCAGTGCTCTTCTTGGATGTTGCTGGAGACCCTGAGGGCCAAAACAGGCAATACCACTGACCTTGACAATAGCCTCATCCGCAACCTCACACTTTTCACTGAGGACCCAGAGGCTGCCTATCCCAGCCAAGATGTCGTTTGGAAAAGGTTTGAGCAGGCGTTCACTTCGGCTTGGGGACTAGTCACCTACGCTCCTGTATTCAAGGACTATTACTATGAGGGCCTGAGGCAGTTCTACATGGATAGTATCATGTATCTGGAGCTGAGGGCTTTGCTTCCAGAGACATACGAGCTGGATGGGAGCACACATGACAGTGCCTGGGGCCTCAAGACCTATCAGGACGTGACCAGGCAGTTTGTGTCAGAGCACCCAGACTTCCTGGGAGCTCGTGTCATCTTCACTGTGCACAGGCGGCTGAATGCGTCAATGGCATGGAAGGCAGTGGAGGAGGCTATGAACCTACAGAAAGTCTTTCCAGAGATCATGGCTGGATTTGACCTAGTGGGTCGGGAAGATAGTGGAAGACCCCTCTGGTACTTCAAGGAGGCCTTGTCTCTGCCAGGCGAGAGAGGAGTCAACCTTCCATTCTTCTTCCacgcaggagagactgATGAAGAGGGCACTGATGTGGATGGGAACCTACTGGATGCTTTACTGTTCAACACGTCTCGCATCGGCCATGGCTTTGCCCTGCTGCGCCACCCCGTGGCCAAGGCCCTCTCTAGGAGGAAAGGGGTGGCTGTAGAGGTGTGCCCCATCTCCAACCAGGTACTGAAACTGGTCTCAGACCTGCGGAATCACCCAGCAGCTGTTCTGATGTCAGAGGGCCATCCCCTGGTGATCAGTTCAGACGACCCTGCCATGTTTGGAGCTTCTGGCCTCTCCCATGATTTTTACGAGGCGTTTGTGGGTTTAGGTGGAATGAACTCTCACATAGGAACTCTCAAGGAACTGGCCATGAACTCCATCAGGTACAGCTCTCTGTCGCCACAGCTGAAGGAGAAAGCATTAGATTTGTGGCAGAGAAAATGGGACAAGTTTGTCTCAGAGAACTCACAATAGAGTCCTGCTGGAGCAGAGGAGTGGTCATTCGGATGCTAACTGTGACAGTGGGATCACCCCAGTCTGTGAGCCTGTTACTTGTGCCCCATAGGAAGGGAATGATATTTGGAAATGTTGTTCAAAATTCAGACAAGGGAAAGGATGTAGGTGTTATTGAAACATCATTTTTGGTATTTCCCTTTGCCTATGATGCTGTAGACAGTTTGGCAAATTAGGGTTGAGAAGGAAAAAGAGAACAAGTTCATATCGCCCTCACGTGGATAGGGTGTGTATAACACTCCTGTAAGAAATCAATCAGGAGACCACACTGCTGTCACCTCCTACAAAATGGAGGCCCCTGACAGAAGTTGAGTTCACTAGTCAAGGAGTCATGAAGGAAgcgtttttttttacacaaaggCATTTGATCATTATTATTTCAGTTGCAGAGAATTGTATTTGCACTGTAATTGTGAATTCAAGGAGACTCTACATGGTAATAGAGCACAGTGAGAAAAATATTACACCGAATGAACTGACCAGCTAGTCTTTAATAGCATTTTATGCTGGTAATGTGATTTTAATGGAGAACATGTGCATTTGTACAGATTTAATTAATTATACGGACACGTTATGACAAATGCATGCAGAACAGTAGGCAATGCCTTATTCATAGACACACTTTTCTATGAATACTTTTTTGATTGTATTTTTTTAGTTGTGAAATAGTTTTGAATTAAGGGAAGGAAAACATCA

Function

symbol description
cecr1 adenosine deaminase CECR1

NR:

description
adenosine deaminase CECR1-A-like

GO: NA

KEGG:

id description
K19572 CECR1, ADA2; adenosine deaminase CECR1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021574876.2 True 2467 mRNA 0.48 10 85908697 85915458

Neighbor

gene id symbol gene type direction distance location
LOC110498211 LOC106561369 coding upstream 7803 85845868 ~ 85900894 (+)
LOC110498193 LOC106561370 coding upstream 72582 85831193 ~ 85836115 (+)
bida LOC106561376 coding upstream 143666 85755625 ~ 85765031 (+)
wee2 LOC106561372 coding upstream 154486 85748761 ~ 85754211 (+)
agk LOC106561375 coding upstream 174069 85727984 ~ 85734628 (+)
LOC110498298 LOC106561360 coding downstream 101429 86016887 ~ 86036771 (+)
LOC110498335 LOC106561359 coding downstream 127342 86042800 ~ 86111227 (+)
LOC110498346 LOC106573196 coding downstream 199167 86114625 ~ 86121138 (+)
LOC110498357 LOC106561358 coding downstream 209300 86124758 ~ 86131467 (+)
LOC110498407 LOC106561353 coding downstream 508252 86423710 ~ 86477838 (+)
G196990 NA non-coding upstream 65438 85842017 ~ 85843259 (+)
G196905 NA non-coding upstream 130759 85775488 ~ 85777938 (+)
G196877 NA non-coding upstream 305207 85602573 ~ 85603490 (+)
G196816 NA non-coding upstream 406473 85501891 ~ 85502224 (+)
G196791 NA non-coding upstream 447169 85460837 ~ 85461528 (+)
G197031 LOC106561367 non-coding downstream 34961 85950419 ~ 85950944 (+)
G197036 NA non-coding downstream 42708 85958166 ~ 85961475 (+)
G197037 NA non-coding downstream 44344 85959802 ~ 85963597 (+)
G197043 NA non-coding downstream 53355 85968813 ~ 85969223 (+)
G197116 NA non-coding downstream 157067 86072525 ~ 86073581 (+)
LOC110498034 LOC106573178 other upstream 888663 85010068 ~ 85054392 (+)
G195155 NA other upstream 1308373 84596410 ~ 84600324 (+)
G194395 NA other upstream 2349099 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 2783732 83119221 ~ 83124965 (+)
G193339 LOC106561425 other upstream 3254267 82652633 ~ 82654430 (+)
G197069 NA other downstream 220158 86135616 ~ 86136608 (+)
G198417 LOC106561459 other downstream 1122053 87037511 ~ 87039236 (+)
G198575 NA other downstream 1234744 87150202 ~ 87150490 (+)
G198784 NA other downstream 1578165 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 1620478 87535936 ~ 87536928 (+)

Expression


Co-expression Network