LOC110498357 (LOC106561358)


Basic Information

Item Value
gene id LOC110498357
gene name LOC106561358
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86124758 ~ 86131467 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021574980.2
ACCTTTAAAGTGAGGGGCGGTGGTGAAATTCCCTGGAAATGTAGGCTACACGATTATATAATACATACATAATTTCCCGCACATACAATATTCTGTTGAGCTTGACACCTGTTTTTTGTATAGGTTAGAGCGAGCATAATCTATTGTTAGCCGTGTTATTTAAAGAGTTCATGAAACTCAACTTCACCTCCGGTCAGCCAAAAAAGTATCGACAGGGTTTTGGGCCAGTTACAGAGCTGTCAGTCTTCAAATTGAATTTGTGGCCTCTGTTCCCGTCAATTGTGTTTAACACTGCACCTTGAGCACCTCAGGATTGCCGTGTGAACCGGCACATTTCCCTAACATGCAACCGGCTCTCGTCGTGATCTGGCTGGCCGCTCTACAACAATCCATTCCGGTCAATTGTTTCCCTGTACACCTAGACCTGTCGCCGCCGCACAGGACAATCAAAGGAATCCTCGCGCGCTCCGAGTCTGTCGATACAGGACATTATTTATGGAAGGTGAATTTGAATGGACATGTAAAGAAAGCCATCTTCACAAACTCTCTCGTTGTCCTCCCAATAAGAACAGAAACAAGTGACTTTGTGTCAATATTGGACTTGAAAAGTAAACGTTTCTTATGCGTCGACGTCGAGGAAAAGTGGTTCAGTTCTATGATGTTCAGCAGGAAAGAGTGCCTTTTCCAGCACAGGCGGATGGAGAACCATGTTGACGTGTTCTATTCATCCAGCAATGGACTGTTGCTCCTACTGGAAGGGGCTGAGATCCCTGTGAAAGGGTATGACTTGTTAAAGAGACACATGGTTTACAGAAGGAAGAGGAGCCAACAGGAGAACCCAGATGCAGACTCCATGGAGGATCAGGACCTGGCTATGCAACAGGACCAAGAACGAGCTGGCGCCATTTCCAAGGAGACCATCACTTCTTGTGACGACCCTTTGCGGGTGTTGCATTCCAATAGCCCAGGCAGTCCTACCAAAATGGCTGTGCAAAAGGTAGACAAAGTGGCCCAGGGTGGTCTAGCGGTCTAAGCAGATGCCTCTGGCACATGTCTACAGTGTTGTCATAGGTGTGAATCCAACCTactgccctctctctttccctactatcatcctctctctttatcttagGGGTAGGcaatcctgttcctggagtgctTGCAGGATTTTGCCCCAACTAGGCATCACACCAGACCAAATGAGCAAATTgactaaattcaacacacctggtcttccaagttggttaaatcaaaaacatgaagtCCTTGCGTCACTCCAGAACCAAGGTTGCCTAGTCCTGCTCTaactgttcaataaagtcagaaaattgcttaaaaatatatttttaaaatggaAAATGCAGAGAAAGAGTGAAGCATTGGCCAATGGCTTGACTCGTAAGGCCAGAGAAATGAGCTTTGAATTTGAAGCTTGTCTGGAAAATGTTTAAACTTTTTGCTAGATAACATTAAGGGATATAATGCCATGCACCAGTGCCTCAATCCTTATGAGTTTTTGGTTTTGCAATCGTAGTCTGGATGGAGGGGTCACAATACAACTTGAGAAGGAGCACGTTAGATTGAAACAAGGAGGTGAATTAGAAAGCTGATCAGTGAGCATCATGAGAAACAGTCTTACATGCTTATATACAAATCATTCAAATCCAGAcagaaaatatttacacaagaagCAGTCTAATATCACACAGTCAAAACTCTCCGTCGTTTAGTTAAATTCACCATATTCTGCGATTCTTCTTAAGGTCATTAATGAGTGGATGAGAATGGGTGGATGAGACCATGTGTATAGTGCAGTGAGAAGCCAACCCTTTGGTTATGCAAGGGTGTGATGCACTTTTtcactgggaccagaaatcggcCCTGGCATTTGTAACACACCGGCCCATTTCTTTCCCCAAGGCCCAGACAGCGACCAATTTTGTGGCCCCCATTCTTagcctgatgatgatgatgatgatgatgatgatcattttgcacaaaaaaaaaacaagttaggCAGGCCCACGAGGTAAACAATCAACCGGCCCATCTGGAATTTTTCACGAAATGCCTGATGACCAGTCTGCCCCTGCACTTTTTAAATATTTACATTGCAAAACACTTTCAAACAGTTTGGACTTTCATCCTTGACACAGAGAAAACCAATCAAATCATCCTGAAAATATGCATCCTCATTATGAAATGggcacttcttgtttttataacaGTGTATAAAAAGTTGAGGCAGGTCACCCATTTCCTTTTCTACATTACTTAGAATCGTCTATCAATTCATACAGAGAGACGTTTGAGTAGCAGTTGATGAGGGGCCTGTTTGGCAACGTTAAACATAATTTGTCCTTTTTGGGTAACGCCTGGGTTGAACCAGTGTCATGTGGTCCTTTTAACTCCTTTTAAAAAGTACCATTTTAAACTGGTTTGGTATTGAGCCTGATGTTGCAATATTTTTTTTGCATGAGATTTTGCTATGTATGTCAAAATGGACCAACATTTCTGTATGAATGATTGTAATTGACAAGTAAATATTAATTGATACAACATTGCATTAATGCATTGTAACTTCTATTAATTGAAGACCATTTTTCAATGGATGTGTTATGGTATTACTATATTTTGTCAATCTATAGGTTGTGGTGGATGTTCACAATGTTT
>XM_021574985.2
catactacccagctagcacatttggttccttggaagttgtgggaatgtacaTTTTTGGTTCAGATGTGTCACCACCGGTTCTAAAGTGGTGTGACAAAAGTATTGCGTGTCTTTTCaggggcctggagtttttcctgatctcatgacctgggcccggtttcccgataGTAATAAAACATTAGTATGCCTAGGTTTCAACAATGCATATTTCCTACTACatgcgtttcccaaaacaccacgcagagagcATGTTCGCTAAATGTGTTGATACTGATAGGATCAGAAGAAAGAACACTGCTCTCGGATCTCCCTTTCCAATCTTACCTTAATATTTGAGATATCACATATGACTACAAATATTGAGgcggcttattctaatgcttaccctATAACAATGCACTAAATCCATTAAATATATTCATGCCAACATTACCGAAAGTAGTGTACAAATAGTTAAATAAAACTAAATTTCATTAACATAAAATGGATTGCAATATTATTCAAATAtataggtctatgtagcctatacTGTATTTCTTTTAATACAGGGTTTTCATTTAAAGTGTCTTTATGTCCTTCGCTTGTTTTGCAAAGAAATGGGCagctttgtatttgtagtcactGTCACATTCATTCTAAAGTTAATCAGCAACCACATAAAGACAAACATCTTGATTTTGTGTTTAACTGAGATCTTGTGTATAAAGAGACGCAAAAAGGCATTCACAACGTACTTAGCTGTTCGAGTAGTCTGAGGCGGTCATTAAAAAAAAGGCATTCACACCGTACTTAGCTGTTCGAGTAGTCTGAGGCGGTCATTAAATAACCAGTGTTTTTCAAGAGCAACTTTAGTAACGTTGGTTTTAGGAAACAGCTCAGAGATCTAAGGATGCTCCTACGACGGTTCTAATGATGAACGTAGGCTttaaatgcttttgggaaactgggCCCAAGTCAGTTGTCCTCCCAATAAGAACAGAAACAAGTGACTTTGTGTCAATATTGGACTTGAAAAGTAAACGTTTCTTATGCGTCGACGTCGAGGAAAAGTGGTTCAGTTCTATGATGTTCAGCAGGAAAGAGTGCCTTTTCCAGCACAGGCGGATGGAGAACCATGTTGACGTGTTCTATTCATCCAGCAATGGACTGTTGCTCCTACTGGAAGGGGCTGAGATCCCTGTGAAAGGGTATGACTTGTTAAAGAGACACATGGTTTACAGAAGGAAGAGGAGCCAACAGGAGAACCCAGATGCAGACTCCATGGAGGATCAGGACCTGGCTATGCAACAGGACCAAGAACGAGCTGGCGCCATTTCCAAGGAGACCATCACTTCTTGTGACGACCCTTTGCGGGTGTTGCATTCCAATAGCCCAGGCAGTCCTACCAAAATGGCTGTGCAAAAGGTAGACAAAGTGGCCCAGGGTGGTCTAGCGGTCTAAGCAGATGCCTCTGGCACATGTCTACAGTGTTGTCATAGGTGTGAATCCAACCTactgccctctctctttccctactatcatcctctctctttatcttagGGGTAGGcaatcctgttcctggagtgctTGCAGGATTTTGCCCCAACTAGGCATCACACCAGACCAAATGAGCAAATTgactaaattcaacacacctggtcttccaagttggttaaatcaaaaacatgaagtCCTTGCGTCACTCCAGAACCAAGGTTGCCTAGTCCTGCTCTaactgttcaataaagtcagaaaattgcttaaaaatatatttttaaaatggaAAATGCAGAGAAAGAGTGAAGCATTGGCCAATGGCTTGACTCGTAAGGCCAGAGAAATGAGCTTTGAATTTGAAGCTTGTCTGGAAAATGTTTAAACTTTTTGCTAGATAACATTAAGGGATATAATGCCATGCACCAGTGCCTCAATCCTTATGAGTTTTTGGTTTTGCAATCGTAGTCTGGATGGAGGGGTCACAATACAACTTGAGAAGGAGCACGTTAGATTGAAACAAGGAGGTGAATTAGAAAGCTGATCAGTGAGCATCATGAGAAACAGTCTTACATGCTTATATACAAATCATTCAAATCCAGAcagaaaatatttacacaagaagCAGTCTAATATCACACAGTCAAAACTCTCCGTCGTTTAGTTAAATTCACCATATTCTGCGATTCTTCTTAAGGTCATTAATGAGTGGATGAGAATGGGTGGATGAGACCATGTGTATAGTGCAGTGAGAAGCCAACCCTTTGGTTATGCAAGGGTGTGATGCACTTTTtcactgggaccagaaatcggcCCTGGCATTTGTAACACACCGGCCCATTTCTTTCCCCAAGGCCCAGACAGCGACCAATTTTGTGGCCCCCATTCTTagcctgatgatgatgatgatgatgatgatgatcattttgcacaaaaaaaaaacaagttaggCAGGCCCACGAGGTAAACAATCAACCGGCCCATCTGGAATTTTTCACGAAATGCCTGATGACCAGTCTGCCCCTGCACTTTTTAAATATTTACATTGCAAAACACTTTCAAACAGTTTGGACTTTCATCCTTGACACAGAGAAAACCAATCAAATCATCCTGAAAATATGCATCCTCATTATGAAATGggcacttcttgtttttataacaGTGTATAAAAAGTTGAGGCAGGTCACCCATTTCCTTTTCTACATTACTTAGAATCGTCTATCAATTCATACAGAGAGACGTTTGAGTAGCAGTTGATGAGGGGCCTGTTTGGCAACGTTAAACATAATTTGTCCTTTTTGGGTAACGCCTGGGTTGAACCAGTGTCATGTGGTCCTTTTAACTCCTTTTAAAAAGTACCATTTTAAACTGGTTTGGTATTGAGCCTGATGTTGCAATATTTTTTTTGCATGAGATTTTGCTATGTATGTCAAAATGGACCAACATTTCTGTATGAATGATTGTAATTGACAAGTAAATATTAATTGATACAACATTGCATTAATGCATTGTAACTTCTATTAATTGAAGACCATTTTTCAATGGATGTGTTATGGTATTACTATATTTTGTCAATCTATAGGTTGTGGTGGATGTTCACAATGTTTAAATATG

Function

NR:

description
fibroblast growth factor 23-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021574980.2 False 2673 mRNA 0.42 3 86124758 86131460
XM_021574985.2 True 3087 mRNA 0.40 3 86125340 86131467

Neighbor

gene id symbol gene type direction distance location
LOC110498346 LOC106573196 coding upstream 3620 86114625 ~ 86121138 (+)
LOC110498335 LOC106561359 coding upstream 13531 86042800 ~ 86111227 (+)
LOC110498298 LOC106561360 coding upstream 87987 86016887 ~ 86036771 (+)
LOC110498230 cecr1 coding upstream 209300 85908697 ~ 85915458 (+)
LOC110498211 LOC106561369 coding upstream 223864 85845868 ~ 85900894 (+)
LOC110498407 LOC106561353 coding downstream 292243 86423710 ~ 86477838 (+)
LOC110498438 LOC106561350 coding downstream 349808 86481275 ~ 86520602 (+)
LOC110498585 LOC106561449 coding downstream 424008 86555475 ~ 86564249 (+)
LOC110498595 LOC106561448 coding downstream 442102 86573569 ~ 86624542 (+)
trnag-gcc-2 NA coding downstream 588149 86719616 ~ 86719686 (+)
G197072 NA non-coding upstream 11591 86113000 ~ 86113167 (+)
G197129 NA non-coding upstream 33937 86089942 ~ 86090821 (+)
G197116 NA non-coding upstream 51177 86072525 ~ 86073581 (+)
G197043 NA non-coding upstream 155535 85968813 ~ 85969223 (+)
G197070 NA non-coding downstream 3634 86135101 ~ 86135427 (+)
G197065 NA non-coding downstream 9993 86141460 ~ 86146225 (+)
G197156 NA non-coding downstream 33742 86165209 ~ 86181488 (+)
G197066 NA non-coding downstream 36486 86167953 ~ 86173911 (+)
G197170 NA non-coding downstream 54929 86186396 ~ 86186734 (+)
LOC110498034 LOC106573178 other upstream 1104724 85010068 ~ 85054392 (+)
G195155 NA other upstream 1524434 84596410 ~ 84600324 (+)
G194395 NA other upstream 2565160 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 2999793 83119221 ~ 83124965 (+)
G193339 LOC106561425 other upstream 3470328 82652633 ~ 82654430 (+)
G197069 NA other downstream 4149 86135616 ~ 86136608 (+)
G198417 LOC106561459 other downstream 906044 87037511 ~ 87039236 (+)
G198575 NA other downstream 1018735 87150202 ~ 87150490 (+)
G198784 NA other downstream 1362156 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 1404469 87535936 ~ 87536928 (+)

Expression


Co-expression Network