zpd (LOC106594968)


Basic Information

Item Value
gene id zpd
gene name LOC106594968
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86715060 ~ 86719172 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036957981.1
AATTGACTGGTGCAATTAGGTTGCTGATAGGCTGGGAAAGATGGGGTGACTTCATTTCTGTGCTTGGCCAATGAGGTTACTCGATGGAAGTTGGGGCGCTCTGAGGGAAATGAAGGTGTGTGACTGGGGGTAGGCTTATTGCTCAGATACAAATAAACAGGTGTTTTACATTCAGGTAATCACCTAGGTCTATGGTAATTACAGCTCCAGGCCTTTCGATCTGTTGAGTATATAAGGctacgttttttttttgtattcttCAGACAGGGCTATGTTACTTTGACCTTCCAGTAATTCAAGTCagtacaaaaataaatatatattttggaaaCAGATTGCAAATAACCAATGGCGCTCAAATTCAACTTGAAGGTTAATTGCTGTGGAATTTACCAGGTATTTTTGGTCCTCGTCATTTTCTGCTGTGACTGTGTCCTTGGAATATGCACTGTCACACACTGCACTGACACAACCAAGTGTTTGCTATCCCTCGACAAAAGCAACTGCAAATGTGCTGTTGGCTACTATGGAGACCTGTGTGACAAAGtTGCTACCATCAATGTCATGTGTGGCAAAGACTACATTACTATCATGGTGAATGAGGACTTTTTCCAGTACTACAAAGTACCTATGGAATCTCTGCACTTGAAGAATGAGTCTTGTCGTGCCCAAAAGGAGGTTATGTCTGATGTCCCATACTACATTGTGCGGATATCAAAGGATCAGTACGTTTCCTGTGGCGGTAAACCACTGGAGAAAAACATCACTCACATTGCATACGCCTTAACTCTCATGTCGGCCCCTCAAGTCTATGGAAATATAATAAGAGACCCAATGATAAAAATTGAGTACACGTGTATCTACCCATACATCCGCACTGTCAGTTTGCCGTACCCCATCATCCCCTTCTCTAGTGAGACTGTGATGCGGATGGGTGAGTTGGATGCCAAGGTGGAGATGGCCCTCTTCACAGATCACACCTACACAGAGGCGTTCCAAAGCTCACCGCTGATCCACCTCCGGGACAGGGTGTATGTGGAGATCAAGGTCGTGGAGCTGGAGGACGTCTTCCACTTGAGGGTGAATGAATGCTGGGCCACACAGTCCCCCAAACCCAACCAGACAGACAGCGCTGTTCACACCCTGCTGCGCAATGGgtGTGTGAATGACGACACTGTCACCTTTCTCAATACGACAATGGGCGCCAATGGAGAGGCCTCAACCATCCGGTACAGCTTTGACATGTTCCGCTTTGTTGTGGAGCCTCATGACCTGTACCTGCACTGCACAGTGCGCTTGTGCTCCCTGGACGATGACGAACCCTGCATTCCTGAGTGCAAATCTATAACCAAGAGGGCAGCAGTGCGTGGAGACCCAACTCAAGGTCTACTGTCATATGGACCAATCAGGATTGACATACCAGACCGACCCCAATCTAATCTGCTGCTGCTGATGATTCCTGTGGCTGGCATCTGGGTCCTGGGCCTCTTCCTCCTCGCCCTAATCACCATCGCTAAGGCAGGAAACCGACGACTGTCACAGCTAGCAAACCGCTGACATCCAACttgaataaaaataataatttctatGACAATTAAATGAGTCCCTCT
>XM_036957982.1
AATTGACTGGTGCAATTAGGTTGCTGATAGGCTGGGAAAGATGGGGTGACTTCATTTCTGTGCTTGGCCAATGAGGTTACTCGATGGAAGTTGGGGCGCTCTGAGGGAAATGAAGGTGTGTGACTGGGGGTAGGCTTATTGCTCAGATACAAATAAACAGGTGTTTTACATTCAGGTAATCACCTAGGTCTATGGTAATTACAGCTCCAGGCCTTTCGATCTGTTGAGTATATAAGGctacgttttttttttgtattcttCAGACAGGGCTATGTTACTTTGACCTTCCAGTAATTCAAGTCagtacaaaaataaatatatattttggaaaCAGATTGCAAATAACCAATGGCGCTCAAATTCAACTTGAAGGTATTTTTGGTCCTCGTCATTTTCTGCTGTGACTGTGTCCTTGGAATATGCACTGTCACACACTGCACTGACACAACCAAGTGTTTGCTATCCCTCGACAAAAGCAACTGCAAATGTGCTGTTGGCTACTATGGAGACCTGTGTGACAAAGtTGCTACCATCAATGTCATGTGTGGCAAAGACTACATTACTATCATGGTGAATGAGGACTTTTTCCAGTACTACAAAGTACCTATGGAATCTCTGCACTTGAAGAATGAGTCTTGTCGTGCCCAAAAGGAGGTTATGTCTGATGTCCCATACTACATTGTGCGGATATCAAAGGATCAGTACGTTTCCTGTGGCGGTAAACCACTGGAGAAAAACATCACTCACATTGCATACGCCTTAACTCTCATGTCGGCCCCTCAAGTCTATGGAAATATAATAAGAGACCCAATGATAAAAATTGAGTACACGTGTATCTACCCATACATCCGCACTGTCAGTTTGCCGTACCCCATCATCCCCTTCTCTAGTGAGACTGTGATGCGGATGGGTGAGTTGGATGCCAAGGTGGAGATGGCCCTCTTCACAGATCACACCTACACAGAGGCGTTCCAAAGCTCACCGCTGATCCACCTCCGGGACAGGGTGTATGTGGAGATCAAGGTCGTGGAGCTGGAGGACGTCTTCCACTTGAGGGTGAATGAATGCTGGGCCACACAGTCCCCCAAACCCAACCAGACAGACAGCGCTGTTCACACCCTGCTGCGCAATGGgtGTGTGAATGACGACACTGTCACCTTTCTCAATACGACAATGGGCGCCAATGGAGAGGCCTCAACCATCCGGTACAGCTTTGACATGTTCCGCTTTGTTGTGGAGCCTCATGACCTGTACCTGCACTGCACAGTGCGCTTGTGCTCCCTGGACGATGACGAACCCTGCATTCCTGAGTGCAAATCTATAACCAAGAGGGCAGCAGTGCGTGGAGACCCAACTCAAGGTCTACTGTCATATGGACCAATCAGGATTGACATACCAGACCGACCCCAATCTAATCTGCTGCTGCTGATGATTCCTGTGGCTGGCATCTGGGTCCTGGGCCTCTTCCTCCTCGCCCTAATCACCATCGCTAAGGCAGGAAACCGACGACTGTCACAGCTAGCAAACCGCTGACATCCAACttgaataaaaataataatttctatGACAATTAAATGAGTCCCTCT

Function

NR:

description
uromodulin-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036957981.1 False 1610 mRNA 0.47 9 86715060 86719172
XM_036957982.1 True 1586 mRNA 0.47 9 86715060 86719172

Neighbor

gene id symbol gene type direction distance location
LOC110498636 LOC106561446 coding downstream 64 86707476 ~ 86714996 (-)
LOC118942936 LOC106611498 coding downstream 13809 86699341 ~ 86701251 (-)
LOC118937297 LOC106561464 coding downstream 19858 86684087 ~ 86695202 (-)
LOC110498617 LOC106561447 coding downstream 38810 86658014 ~ 86676250 (-)
setd6 setd6 coding downstream 188290 86520022 ~ 86526770 (-)
LOC110533876 NA coding upstream 24760 86743932 ~ 86747314 (-)
LOC118942938 LOC106561453 coding upstream 165991 86885163 ~ 86887339 (-)
LOC110498693 LOC106561455 coding upstream 219123 86938295 ~ 86967505 (-)
rassf10a LOC106561459 coding upstream 318122 87037294 ~ 87039516 (-)
LOC110498779 LOC106561460 coding upstream 324717 87043889 ~ 87138769 (-)
G198007 NA non-coding downstream 60520 86648809 ~ 86654540 (-)
G198005 NA non-coding downstream 67072 86647681 ~ 86647988 (-)
G197974 NA non-coding downstream 103796 86607931 ~ 86611264 (-)
G197864 NA non-coding downstream 143980 86570701 ~ 86571080 (-)
G198032 NA non-coding upstream 539 86719711 ~ 86720152 (-)
G198034 NA non-coding upstream 9331 86728503 ~ 86732160 (-)
G198074 NA non-coding upstream 41537 86760709 ~ 86760932 (-)
G198224 NA non-coding upstream 143736 86862908 ~ 86863261 (-)
G198230 NA non-coding upstream 151252 86870424 ~ 86870635 (-)
G197554 NA other downstream 751395 85959845 ~ 85963665 (-)
G197498 slc25a18 other downstream 871567 85831239 ~ 85843493 (-)
LOC110498022 LOC106561385 other downstream 2075304 84596433 ~ 84910878 (-)
G195486 LOC106573171 other downstream 2732893 83977965 ~ 83982167 (-)
G195427 NA other downstream 2810609 83881540 ~ 83904451 (-)
G198342 LOC100194703 other upstream 183864 86903036 ~ 86903956 (-)
G198912 NA other upstream 602967 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 2887665 89606837 ~ 89609890 (-)
G202279 NA other upstream 3658385 90377557 ~ 90441425 (-)
G203915 rassf9 other upstream 4870040 91589212 ~ 91591049 (-)

Expression


Co-expression Network