trnag-gcc-2


Basic Information

Item Value
gene id trnag-gcc-2
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86719616 ~ 86719686 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnag-gcc-2
GCATTggtggttcagtggtagaattctcgcctgccacgcgggaggcccgggttcgattcccggccaatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-gcc-2 True 71 mRNA 0.61 1 86719616 86719686

Neighbor

gene id symbol gene type direction distance location
LOC110498595 LOC106561448 coding upstream 95074 86573569 ~ 86624542 (+)
LOC110498585 LOC106561449 coding upstream 155367 86555475 ~ 86564249 (+)
LOC110498438 LOC106561350 coding upstream 199014 86481275 ~ 86520602 (+)
LOC110498407 LOC106561353 coding upstream 241778 86423710 ~ 86477838 (+)
LOC110498357 LOC106561358 coding upstream 588149 86124758 ~ 86131467 (+)
trnag-gcc-3 NA coding downstream 683 86720369 ~ 86720439 (+)
trnag-gcc-4 NA coding downstream 2942 86722628 ~ 86722698 (+)
trnag-gcc-5 NA coding downstream 5201 86724887 ~ 86724957 (+)
trnag-gcc-6 NA coding downstream 5954 86725640 ~ 86725710 (+)
trnag-gcc-7 NA coding downstream 6707 86726393 ~ 86726463 (+)
G197901 NA non-coding upstream 11361 86707519 ~ 86708255 (+)
G197920 NA non-coding upstream 12523 86671522 ~ 86707093 (+)
G197932 LOC106561464 non-coding upstream 25431 86685291 ~ 86694185 (+)
G197912 LOC106561447 non-coding upstream 60301 86658695 ~ 86659315 (+)
G197911 NA non-coding upstream 61044 86656218 ~ 86658572 (+)
G198056 NA non-coding downstream 30540 86750226 ~ 86750662 (+)
G198070 LOC106581475 non-coding downstream 39167 86758853 ~ 86759083 (+)
G198071 NA non-coding downstream 39699 86759385 ~ 86759611 (+)
G198086 NA non-coding downstream 52838 86772524 ~ 86772807 (+)
G198130 NA non-coding downstream 117304 86836990 ~ 86837274 (+)
G197069 NA other upstream 583008 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 1699582 85010068 ~ 85054392 (+)
G195155 NA other upstream 2119292 84596410 ~ 84600324 (+)
G194395 NA other upstream 3160018 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 3594651 83119221 ~ 83124965 (+)
G198417 LOC106561459 other downstream 317825 87037511 ~ 87039236 (+)
G198575 NA other downstream 430516 87150202 ~ 87150490 (+)
G198784 NA other downstream 773937 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 816250 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 1147191 87866877 ~ 87867967 (+)

Expression


Co-expression Network