LOC118942939


Basic Information

Item Value
gene id LOC118942939
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86887279 ~ 86888026 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038621.1
CCTGACACTTGACAGACTCCCGCCACCCACCTCTTCAACTTCAGAGAGAGCGCATCTTTTTAGCGCGCATGCCCTTTCATTTGACAAGGCTACTGGCTGATCTCGTGACACACCTACTGTATGCGAATCTTGCCATCACTCACCTGCATCTACAAATAATGTTGGTCTACCAGGACTACCATCAGCAATCTCAATTGGACCTTGCAAGACGATGACATGGCAATCAACAGACTTTCCAGTTTTCCTTCACAGCGTTCTTCAGGGTGgctctaaccaatggtgcggggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038621.1 True 288 mRNA 0.50 4 86887279 86888026

Neighbor

gene id symbol gene type direction distance location
zgc:162634 NA coding upstream 1907 86884172 ~ 86898082 (+)
LOC110498682 LOC106561452 coding upstream 14014 86787804 ~ 86873265 (+)
trnag-gcc-9 NA coding upstream 159324 86727885 ~ 86727955 (+)
trnag-gcc-8 NA coding upstream 160063 86727146 ~ 86727216 (+)
trnag-gcc-7 NA coding upstream 160816 86726393 ~ 86726463 (+)
LOC110498720 LOC106561456 coding downstream 22444 86910470 ~ 86937217 (+)
si:ch211-266k8.4 LOC106561457 coding downstream 85301 86973327 ~ 87027553 (+)
dkk3b LOC106561478 coding downstream 379908 87267934 ~ 87276184 (+)
far1 LOC106561480 coding downstream 400736 87288762 ~ 87323586 (+)
LOC118937298 ovch2 coding downstream 447771 87335797 ~ 87338557 (+)
G198234 NA non-coding upstream 11288 86875703 ~ 86875991 (+)
G198153 NA non-coding upstream 19923 86867069 ~ 86867356 (+)
G198152 NA non-coding upstream 20395 86866678 ~ 86866884 (+)
G198145 NA non-coding upstream 27625 86859453 ~ 86859654 (+)
G198254 NA non-coding downstream 12844 86900870 ~ 86901071 (+)
G198257 NA non-coding downstream 17925 86905951 ~ 86906474 (+)
G198258 NA non-coding downstream 18457 86906483 ~ 86906780 (+)
G198328 NA non-coding downstream 134243 87022269 ~ 87022751 (+)
G198479 NA non-coding downstream 229049 87117075 ~ 87117488 (+)
G197069 NA other upstream 750671 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 1867245 85010068 ~ 85054392 (+)
G195155 NA other upstream 2286955 84596410 ~ 84600324 (+)
G194395 NA other upstream 3327681 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 3762314 83119221 ~ 83124965 (+)
G198417 LOC106561459 other downstream 149485 87037511 ~ 87039236 (+)
G198575 NA other downstream 262176 87150202 ~ 87150490 (+)
G198784 NA other downstream 605597 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 647910 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 978851 87866877 ~ 87867967 (+)

Expression


Co-expression Network