LOC110498693 (LOC106561455)


Basic Information

Item Value
gene id LOC110498693
gene name LOC106561455
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86938295 ~ 86967505 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575350.2
AGGTTAGTGGTGCAGCACTGGTCATGACGGAGGGAGAAAGTAGGTCACAGACAGAGTAACGTTACCGTTTTATATCACAGTTCACGTAACATTAGACAGAGGGGTCCATTAGATGGAGATGTCCTAGCTAGTTCATCTCATAAAGCAGCAGTTGACTACTccattgtatttgaaaataccgTGTAGCGCACCTATCCCAGTGTCCCAGAGGAGGAATAGAAGCCAGGCCAACCAACCAGgaggtgtttctctctcttcatctcaaaCCACGAGCAGAGCAATTGCAAATGGATGGAAGAAAATTCCAGAAGCTGTAATGAACATTTGTGATTATCTAATGGCAGACCAAAGAATGGACATTACCTCTACGATGAATGAGTTCATGTCCCCCAGCTCCACCGAGCTGATCAGCAGCTCCATCAACACCCAAGGCATGGACTACACCCGCAAGAGGAAGGGCAGCACCTCCGACTACCAAATTGATGGATTTTCTTTTGACGAGAGCAGTATGGATACAGACAAGGATAAGCTTAGGGATTGTGGTGATCATCAGGGGCGGATCAAAAATGCCAGGGAGGCACACAGTCAGATTGAGAAGAGGCGCAGAGACAAGATGAACAGCTTTATAGACGAGCTGGCAGCGCTAGTGCCTACTTGCAACGCTATGTCCCGCAAGCTGGACAAACTCACAGTTCTACGCATGGCTGTTCAGCATATGAAGACATTACGAGGCGCAGCGAACCCATACACAGAGGCGAACTACAAGCCGTCTTTCCTGTCCGATGATGAATTGAAGCACTTAATATTGAGGGCTGCTGATGGCTTTCTGTTCGTCGTCGGATGCGATCGTGGGAAGATCCTCTTCGTCTCTGAGTCTGTTTACAAGATCCTCAACTATAGCCAGaATGACCTAATTGGCCAGAGTCTGTTTGATTACCTGCATCCTAaagacatcgccaaagtcaaggagcAACTGTCGTCATCGGATACAGCACCCCGGGAGCGACTCATCGACGCCAAAACTGGCCTGCCAGTGAAGACTGACATTACCCCTGGGCCGTCTAGACTGTGCTCCGGAGCCAGACGTTCTTTCTTCTGCCGTATGAAATGTAACCGGCCCTACGTCAAAACGGAGGACAAGGACTTCCCCTCCACCTGCTCAAAAAAGAAAGCTGACCGCAAGAGCTTCTGCACGATCCACAGTACTGGCTACCtgaagagctggccgcccagcaaGATGGGTTTGGACGATGACAACGAGCCCGACAACGAGCCCGACAACGAGGGCTGTAACCTCAGCTGCCTGGTGGCCATCGGCCGGCTGCACCCCCACATCATACCCCAGCCCTCCCATGAGGACATCCGCGTCAAACCCACCGAATACGTCTCCCGCCACGCCATCGACGGGAAGTTCGTCTTTGTTGACCAGAGGGCCACAGCCATTCTTGCGTACTTACCCCAGGAGCTTCTAGGCACCTCCTTCTACGAGTATTTTCATCAGGATGATATTGGCCACCTGGCAGAATGTCACAGACAAGTGCTGCAAATGAGAGAAAAGATCAACACAAACTGTTACAAGTTCAAGATTAAAGATGGCTCCTTCATCACGCTGAGAAGCTGCTGGTTTAGTTTCATGAATCCCTGGACAAAAGAGGTGGAGTACATTGTCTCCACAAACACAGTGGTCTCATGCAGTATGCTAGACGGTGCAGACCCCTATCCTCAGTCTGCTGCTTCCCCCACAGCCTCTATGGACAGTGTGCTGACGTCAGAAGGTGGAGGGAGACGGGCTATTCAGACGGTGCCAGGCATCCCTGGCGGAACACGGGCAGGTGCCGGCAAGATCGGCCGTATGATCGCAGAGGAGGTGATGGAGATTCAGAGGACCAGAGGCTCAACACCCTCTAGCTGTGGCTCCAGCCCCCTGAACATCAGCACCCCCCCTCCAGACTGCTCTCCAGGGAGCAAGAGGATTCAAAATGGTGGGACACCAGACCTTCCGTCGGCAGGAACACTACCAGGAGGACCTGACTCCATTGGATACCCATACTCCAACCAGTCCATTATGAGTGACAACTCTCATCTCAGCATTGACATCATGGACGAGCCAGGCTCCAGCAGCCCCAGTAACGATGAGGCAGCCATGGCTGTGATCATGAGTCTCCTGGAGGCTGACGCAGGCCTTGGGGGCCCCGTGGACTTTAGTGACTTACCCTGGCCCTTGTGATGACGGCCCAAGAGGAACGAGGCATAGCAGGACTGTTGGAACTCTTGGGCTAAGTCCCACAGAACTATGTCAAAACCCTGAATTGATGATGCAGTGGCATCATCAGGAACCATGGCACTGTGGGACTTATTGGAGCCGAGACCTCCATGTTGGGACTGAGACAGGTCATTTCAAAGTATACCTGTATGTGCCCTCCTTAGCTTGCTGCTGGACATTCTTCACCACAGGATAATTCAGCATTTTTCAATGGCTATTTTCCTGCATTATCCTACCAGGGATTTCTATTGAAAACCTGTTTGTGTTTGGATGTttttacactacagtacacattgGTTTTCCTTGTTGGATAACCCCATTTGAAAATGTCTTTAAATAGTATAATGTACAAAATACTTTATGCAAAATATATGGTGTGTGTATTGTATCCGCAGTGAAATATTAATTGTATCAGcagttaaatattttttattaaaagtTTGTTTTGTATCTCTTTCCAGAAGACTTTGAGCTATAAACAGAATTTGATGCAGTATGTTATTGACGCTAATGAATAAATTGTATCCATATTTACAATGTTCAAATGTCACTCTCATACTACCAGAAGCATTCTGAACATGAATCCAAGGGTGGGTGAGTGAATCATTCAGGGAATTGCATGTAACGGAAGCAattaaattaatttatttcacaGA
>XM_036958066.1
CTAGGTTAGTGGTGCAGCACTGGTCATGACGGAGGGAGAAAGTAGGTCACAGACAGAGTAACGTTACCGTTTTATATCACAGTTCACGTAACATTAGACAGAGGGGTCCATTAGATGGAGATGTCCTAGCTAGTTCATCTCATctttttttttttgctggaCAGGGGTATCATCCAACGTTAGTTGGATACGTCATTAGTTGGAGCTAGCTGGGCTCGTTAATAATAGTGTGGAACTGCAGCCCGTAATTCGTTGCGTTCCTGCATGTGAGCGCTCCCCCATGTGGGCGTTCCTGCAATTCGGGGCAATCCTGCATGTGGGCATTGGAGGCaaccatagctgtatggatctgtgcaaAACTGCAACAAAAGCAGCAGTTGACTACTccattgtatttgaaaataccgTGTAGCGCACCTATCCCAGTGTCCCAGAGGAGGAATAGAAGCCAGGCCAACCAACCAGgaggtgtttctctctcttcatctcaaaCCACGAGCAGAGCAATTGCAAATGGATGGAAGAAAATTCCAGAAGCTGTAATGAACATTTGTGATTATCTAATGGCAGACCAAAGAATGGACATTACCTCTACGATGAATGAGTTCATGTCCCCCAGCTCCACCGAGCTGATCAGCAGCTCCATCAACACCCAAGGCATGGACTACACCCGCAAGAGGAAGGGCAGCACCTCCGACTACCAAATTGATGGATTTTCTTTTGACGAGAGCAGTATGGATACAGACAAGGATAAGCTTAGGGATTGTGGTGATCATCAGGGGCGGATCAAAAATGCCAGGGAGGCACACAGTCAGATTGAGAAGAGGCGCAGAGACAAGATGAACAGCTTTATAGACGAGCTGGCAGCGCTAGTGCCTACTTGCAACGCTATGTCCCGCAAGCTGGACAAACTCACAGTTCTACGCATGGCTGTTCAGCATATGAAGACATTACGAGGCGCAGCGAACCCATACACAGAGGCGAACTACAAGCCGTCTTTCCTGTCCGATGATGAATTGAAGCACTTAATATTGAGGGCTGCTGATGGCTTTCTGTTCGTCGTCGGATGCGATCGTGGGAAGATCCTCTTCGTCTCTGAGTCTGTTTACAAGATCCTCAACTATAGCCAGaATGACCTAATTGGCCAGAGTCTGTTTGATTACCTGCATCCTAaagacatcgccaaagtcaaggagcAACTGTCGTCATCGGATACAGCACCCCGGGAGCGACTCATCGACGCCAAAACTGGCCTGCCAGTGAAGACTGACATTACCCCTGGGCCGTCTAGACTGTGCTCCGGAGCCAGACGTTCTTTCTTCTGCCGTATGAAATGTAACCGGCCCTACGTCAAAACGGAGGACAAGGACTTCCCCTCCACCTGCTCAAAAAAGAAAGCTGACCGCAAGAGCTTCTGCACGATCCACAGTACTGGCTACCtgaagagctggccgcccagcaaGATGGGTTTGGACGATGACAACGAGCCCGACAACGAGCCCGACAACGAGGGCTGTAACCTCAGCTGCCTGGTGGCCATCGGCCGGCTGCACCCCCACATCATACCCCAGCCCTCCCATGAGGACATCCGCGTCAAACCCACCGAATACGTCTCCCGCCACGCCATCGACGGGAAGTTCGTCTTTGTTGACCAGAGGGCCACAGCCATTCTTGCGTACTTACCCCAGGAGCTTCTAGGCACCTCCTTCTACGAGTATTTTCATCAGGATGATATTGGCCACCTGGCAGAATGTCACAGACAAGTGCTGCAAATGAGAGAAAAGATCAACACAAACTGTTACAAGTTCAAGATTAAAGATGGCTCCTTCATCACGCTGAGAAGCTGCTGGTTTAGTTTCATGAATCCCTGGACAAAAGAGGTGGAGTACATTGTCTCCACAAACACAGTGGTCTCATGCAGTATGCTAGACGGTGCAGACCCCTATCCTCAGTCTGCTGCTTCCCCCACAGCCTCTATGGACAGTGTGCTGACGTCAGAAGGTGGAGGGAGACGGGCTATTCAGACGGTGCCAGGCATCCCTGGCGGAACACGGGCAGGTGCCGGCAAGATCGGCCGTATGATCGCAGAGGAGGTGATGGAGATTCAGAGGACCAGAGGCTCAACACCCTCTAGCTGTGGCTCCAGCCCCCTGAACATCAGCACCCCCCCTCCAGACTGCTCTCCAGGGAGCAAGAGGATTCAAAATGGTGGGACACCAGACCTTCCGTCGGCAGGAACACTACCAGGAGGACCTGACTCCATTGGATACCCATACTCCAACCAGTCCATTATGAGTGACAACTCTCATCTCAGCATTGACATCATGGACGAGCCAGGCTCCAGCAGCCCCAGTAACGATGAGGCAGCCATGGCTGTGATCATGAGTCTCCTGGAGGCTGACGCAGGCCTTGGGGGCCCCGTGGACTTTAGTGACTTACCCTGGCCCTTGTGATGACGGCCCAAGAGGAACGAGGCATAGCAGGACTGTTGGAACTCTTGGGCTAAGTCCCACAGAACTATGTCAAAACCCTGAATTGATGATGCAGTGGCATCATCAGGAACCATGGCACTGTGGGACTTATTGGAGCCGAGACCTCCATGTTGGGACTGAGACAGGTCATTTCAAAGTATACCTGTATGTGCCCTCCTTAGCTTGCTGCTGGACATTCTTCACCACAGGATAATTCAGCATTTTTCAATGGCTATTTTCCTGCATTATCCTACCAGGGATTTCTATTGAAAACCTGTTTGTGTTTGGATGTttttacactacagtacacattgGTTTTCCTTGTTGGATAACCCCATTTGAAAATGTCTTTAAATAGTATAATGTACAAAATACTTTATGCAAAATATATGGTGTGTGTATTGTATCCGCAGTGAAATATTAATTGTATCAGcagttaaatattttttattaaaagtTTGTTTTGTATCTCTTTCCAGAAGACTTTGAGCTATAAACAGAATTTGATGCAGTATGTTATTGACGCTAATGAATAAATTGTATCCATATTTACAATGTTCAAATGTCACTCTCATACTACCAGAAGCATTCTGAACATGAATCCAAGGGTGGGTGAGTGAATCATTCAGGGAATTGCATGTAACGGAAGCAattaaattaatttatttcacaGA
>XM_021575336.2
AACTAGGTTAGTGGTGCAGCACTGGTCATGACGGAGGGAGAAAGTAGGTCACAGACAGAGTAACGTTACCGTTTTATATCACAGTTCACGTAACATTAGACAGAGGGGTCCATTAGATGGAGATGTCCTAGCTAGTTCATCTCATTGTGGAACTGCAGCCCGTAATTCGTTGCGTTCCTGCATGTGAGCGCTCCCCCATGTGGGCGTTCCTGCAATTCGGGGCAATCCTGCATGTGGGCATTGGAGGCaaccatagctgtatggatctgtgcaaAACTGCAACAAAAGCAGCAGTTGACTACTccattgtatttgaaaataccgTGTAGCGCACCTATCCCAGTGTCCCAGAGGAGGAATAGAAGCCAGGCCAACCAACCAGgaggtgtttctctctcttcatctcaaaCCACGAGCAGAGCAATTGCAAATGGATGGAAGAAAATTCCAGAAGCTGTAATGAACATTTGTGATTATCTAATGGCAGACCAAAGAATGGACATTACCTCTACGATGAATGAGTTCATGTCCCCCAGCTCCACCGAGCTGATCAGCAGCTCCATCAACACCCAAGGCATGGACTACACCCGCAAGAGGAAGGGCAGCACCTCCGACTACCAAATTGATGGATTTTCTTTTGACGAGAGCAGTATGGATACAGACAAGGATAAGCTTAGGGATTGTGGTGATCATCAGGGGCGGATCAAAAATGCCAGGGAGGCACACAGTCAGATTGAGAAGAGGCGCAGAGACAAGATGAACAGCTTTATAGACGAGCTGGCAGCGCTAGTGCCTACTTGCAACGCTATGTCCCGCAAGCTGGACAAACTCACAGTTCTACGCATGGCTGTTCAGCATATGAAGACATTACGAGGCGCAGCGAACCCATACACAGAGGCGAACTACAAGCCGTCTTTCCTGTCCGATGATGAATTGAAGCACTTAATATTGAGGGCTGCTGATGGCTTTCTGTTCGTCGTCGGATGCGATCGTGGGAAGATCCTCTTCGTCTCTGAGTCTGTTTACAAGATCCTCAACTATAGCCAGaATGACCTAATTGGCCAGAGTCTGTTTGATTACCTGCATCCTAaagacatcgccaaagtcaaggagcAACTGTCGTCATCGGATACAGCACCCCGGGAGCGACTCATCGACGCCAAAACTGGCCTGCCAGTGAAGACTGACATTACCCCTGGGCCGTCTAGACTGTGCTCCGGAGCCAGACGTTCTTTCTTCTGCCGTATGAAATGTAACCGGCCCTACGTCAAAACGGAGGACAAGGACTTCCCCTCCACCTGCTCAAAAAAGAAAGCTGACCGCAAGAGCTTCTGCACGATCCACAGTACTGGCTACCtgaagagctggccgcccagcaaGATGGGTTTGGACGATGACAACGAGCCCGACAACGAGCCCGACAACGAGGGCTGTAACCTCAGCTGCCTGGTGGCCATCGGCCGGCTGCACCCCCACATCATACCCCAGCCCTCCCATGAGGACATCCGCGTCAAACCCACCGAATACGTCTCCCGCCACGCCATCGACGGGAAGTTCGTCTTTGTTGACCAGAGGGCCACAGCCATTCTTGCGTACTTACCCCAGGAGCTTCTAGGCACCTCCTTCTACGAGTATTTTCATCAGGATGATATTGGCCACCTGGCAGAATGTCACAGACAAGTGCTGCAAATGAGAGAAAAGATCAACACAAACTGTTACAAGTTCAAGATTAAAGATGGCTCCTTCATCACGCTGAGAAGCTGCTGGTTTAGTTTCATGAATCCCTGGACAAAAGAGGTGGAGTACATTGTCTCCACAAACACAGTGGTCTCATGCAGTATGCTAGACGGTGCAGACCCCTATCCTCAGTCTGCTGCTTCCCCCACAGCCTCTATGGACAGTGTGCTGACGTCAGAAGGTGGAGGGAGACGGGCTATTCAGACGGTGCCAGGCATCCCTGGCGGAACACGGGCAGGTGCCGGCAAGATCGGCCGTATGATCGCAGAGGAGGTGATGGAGATTCAGAGGACCAGAGGCTCAACACCCTCTAGCTGTGGCTCCAGCCCCCTGAACATCAGCACCCCCCCTCCAGACTGCTCTCCAGGGAGCAAGAGGATTCAAAATGGTGGGACACCAGACCTTCCGTCGGCAGGAACACTACCAGGAGGACCTGACTCCATTGGATACCCATACTCCAACCAGTCCATTATGAGTGACAACTCTCATCTCAGCATTGACATCATGGACGAGCCAGGCTCCAGCAGCCCCAGTAACGATGAGGCAGCCATGGCTGTGATCATGAGTCTCCTGGAGGCTGACGCAGGCCTTGGGGGCCCCGTGGACTTTAGTGACTTACCCTGGCCCTTGTGATGACGGCCCAAGAGGAACGAGGCATAGCAGGACTGTTGGAACTCTTGGGCTAAGTCCCACAGAACTATGTCAAAACCCTGAATTGATGATGCAGTGGCATCATCAGGAACCATGGCACTGTGGGACTTATTGGAGCCGAGACCTCCATGTTGGGACTGAGACAGGTCATTTCAAAGTATACCTGTATGTGCCCTCCTTAGCTTGCTGCTGGACATTCTTCACCACAGGATAATTCAGCATTTTTCAATGGCTATTTTCCTGCATTATCCTACCAGGGATTTCTATTGAAAACCTGTTTGTGTTTGGATGTttttacactacagtacacattgGTTTTCCTTGTTGGATAACCCCATTTGAAAATGTCTTTAAATAGTATAATGTACAAAATACTTTATGCAAAATATATGGTGTGTGTATTGTATCCGCAGTGAAATATTAATTGTATCAGcagttaaatattttttattaaaagtTTGTTTTGTATCTCTTTCCAGAAGACTTTGAGCTATAAACAGAATTTGATGCAGTATGTTATTGACGCTAATGAATAAATTGTATCCATATTTACAATGTTCAAATGTCACTCTCATACTACCAGAAGCATTCTGAACATGAATCCAAGGGTGGGTGAGTGAATCATTCAGGGAATTGCATGTAACGGAAGCAattaaattaatttatttcacaGA
>XM_021575339.2
AACTAGGTTAGTGGTGCAGCACTGGTCATGACGGAGGGAGAAAGTAGGTCACAGACAGAGTAACGTTACCGTTTTATATCACAGTTCACGTAACATTAGACAGAGGGGTCCATTAGATGGAGATGTCCTAGCTAGTTCATCTCATGTAAGTAGATACATAATATTTTCAGCATGTGTCGTGATGACTAATGGCTAGTTGCATAGCTAGCTATATATCGCGGTTCTAGTTGGCTAACGTCAGCTAACTAACGTTACCTTAGATAACAAGATTAATTTAGGGCTAGCCAAGTTAGGACAATGTAAACTTAACGTTTCGCTGTGGCTAGAAGTGTCTTAGATGAAAGTGTATTTTAGCTGTGGACTAAAATATCCAAGCCTAGTAATGTTAACGTTAGTTAGGGTCTgtagctttttttttttgctggaCAGGGGTATCATCCAACGTTAGTTGGATACGTCATTAGTTGGAGCTAGCTGGGCTCGTTAATAATAGTGTGGAACTGCAGCCCGTAATTCGTTGCGTTCCTGCATGTGAGCGCTCCCCCATGTGGGCGTTCCTGCAATTCGGGGCAATCCTGCATGTGGGCATTGGAGGCaaccatagctgtatggatctgtgcaaAACTGCAACAGTAGCGCACCTATCCCAGTGTCCCAGAGGAGGAATAGAAGCCAGGCCAACCAACCAGgaggtgtttctctctcttcatctcaaaCCACGAGCAGAGCAATTGCAAATGGATGGAAGAAAATTCCAGAAGCTGTAATGAACATTTGTGATTATCTAATGGCAGACCAAAGAATGGACATTACCTCTACGATGAATGAGTTCATGTCCCCCAGCTCCACCGAGCTGATCAGCAGCTCCATCAACACCCAAGGCATGGACTACACCCGCAAGAGGAAGGGCAGCACCTCCGACTACCAAATTGATGGATTTTCTTTTGACGAGAGCAGTATGGATACAGACAAGGATAAGCTTAGGGATTGTGGTGATCATCAGGGGCGGATCAAAAATGCCAGGGAGGCACACAGTCAGATTGAGAAGAGGCGCAGAGACAAGATGAACAGCTTTATAGACGAGCTGGCAGCGCTAGTGCCTACTTGCAACGCTATGTCCCGCAAGCTGGACAAACTCACAGTTCTACGCATGGCTGTTCAGCATATGAAGACATTACGAGGCGCAGCGAACCCATACACAGAGGCGAACTACAAGCCGTCTTTCCTGTCCGATGATGAATTGAAGCACTTAATATTGAGGGCTGCTGATGGCTTTCTGTTCGTCGTCGGATGCGATCGTGGGAAGATCCTCTTCGTCTCTGAGTCTGTTTACAAGATCCTCAACTATAGCCAGaATGACCTAATTGGCCAGAGTCTGTTTGATTACCTGCATCCTAaagacatcgccaaagtcaaggagcAACTGTCGTCATCGGATACAGCACCCCGGGAGCGACTCATCGACGCCAAAACTGGCCTGCCAGTGAAGACTGACATTACCCCTGGGCCGTCTAGACTGTGCTCCGGAGCCAGACGTTCTTTCTTCTGCCGTATGAAATGTAACCGGCCCTACGTCAAAACGGAGGACAAGGACTTCCCCTCCACCTGCTCAAAAAAGAAAGCTGACCGCAAGAGCTTCTGCACGATCCACAGTACTGGCTACCtgaagagctggccgcccagcaaGATGGGTTTGGACGATGACAACGAGCCCGACAACGAGCCCGACAACGAGGGCTGTAACCTCAGCTGCCTGGTGGCCATCGGCCGGCTGCACCCCCACATCATACCCCAGCCCTCCCATGAGGACATCCGCGTCAAACCCACCGAATACGTCTCCCGCCACGCCATCGACGGGAAGTTCGTCTTTGTTGACCAGAGGGCCACAGCCATTCTTGCGTACTTACCCCAGGAGCTTCTAGGCACCTCCTTCTACGAGTATTTTCATCAGGATGATATTGGCCACCTGGCAGAATGTCACAGACAAGTGCTGCAAATGAGAGAAAAGATCAACACAAACTGTTACAAGTTCAAGATTAAAGATGGCTCCTTCATCACGCTGAGAAGCTGCTGGTTTAGTTTCATGAATCCCTGGACAAAAGAGGTGGAGTACATTGTCTCCACAAACACAGTGGTCTCATGCAGTATGCTAGACGGTGCAGACCCCTATCCTCAGTCTGCTGCTTCCCCCACAGCCTCTATGGACAGTGTGCTGACGTCAGAAGGTGGAGGGAGACGGGCTATTCAGACGGTGCCAGGCATCCCTGGCGGAACACGGGCAGGTGCCGGCAAGATCGGCCGTATGATCGCAGAGGAGGTGATGGAGATTCAGAGGACCAGAGGCTCAACACCCTCTAGCTGTGGCTCCAGCCCCCTGAACATCAGCACCCCCCCTCCAGACTGCTCTCCAGGGAGCAAGAGGATTCAAAATGGTGGGACACCAGACCTTCCGTCGGCAGGAACACTACCAGGAGGACCTGACTCCATTGGATACCCATACTCCAACCAGTCCATTATGAGTGACAACTCTCATCTCAGCATTGACATCATGGACGAGCCAGGCTCCAGCAGCCCCAGTAACGATGAGGCAGCCATGGCTGTGATCATGAGTCTCCTGGAGGCTGACGCAGGCCTTGGGGGCCCCGTGGACTTTAGTGACTTACCCTGGCCCTTGTGATGACGGCCCAAGAGGAACGAGGCATAGCAGGACTGTTGGAACTCTTGGGCTAAGTCCCACAGAACTATGTCAAAACCCTGAATTGATGATGCAGTGGCATCATCAGGAACCATGGCACTGTGGGACTTATTGGAGCCGAGACCTCCATGTTGGGACTGAGACAGGTCATTTCAAAGTATACCTGTATGTGCCCTCCTTAGCTTGCTGCTGGACATTCTTCACCACAGGATAATTCAGCATTTTTCAATGGCTATTTTCCTGCATTATCCTACCAGGGATTTCTATTGAAAACCTGTTTGTGTTTGGATGTttttacactacagtacacattgGTTTTCCTTGTTGGATAACCCCATTTGAAAATGTCTTTAAATAGTATAATGTACAAAATACTTTATGCAAAATATATGGTGTGTGTATTGTATCCGCAGTGAAATATTAATTGTATCAGcagttaaatattttttattaaaagtTTGTTTTGTATCTCTTTCCAGAAGACTTTGAGCTATAAACAGAATTTGATGCAGTATGTTATTGACGCTAATGAATAAATTGTATCCATATTTACAATGTTCAAATGTCACTCTCATACTACCAGAAGCATTCTGAACATGAATCCAAGGGTGGGTGAGTGAATCATTCAGGGAATTGCATGTAACGGAAGCAattaaattaatttatttcacaGA
>XM_021575334.2
AAACTAGGTTAGTGGTGCAGCACTGGTCATGACGGAGGGAGAAAGTAGGTCACAGACAGAGTAACGTTACCGTTTTATATCACAGTTCACGTAACATTAGACAGAGGGGTCCATTAGATGGAGATGTCCTAGCTAGTTCATCTCATGTAAGTAGATACATAATATTTTCAGCATGTGTCGTGATGACTAATGGCTAGTTGCATAGCTAGCTATATATCGCGGTTCTAGTTGGCTAACGTCAGCTAACTAACGTTACCTTAGATAACAAGATTAATTTAGGGCTAGCCAAGTTAGGACAATGTAAACTTAACGTTTCGCTGTGGCTAGAAGTGTCTTAGATGAAAGTGTATTTTAGCTGTGGACTAAAATATCCAAGCCTAGTAATGTTAACGTTAGTTAGGGTCTgtagctttttttttttgctggaCAGGGGTATCATCCAACGTTAGTTGGATACGTCATTAGTTGGAGCTAGCTGGGCTCGTTAATAATAGTGTGGAACTGCAGCCCGTAATTCGTTGCGTTCCTGCATGTGAGCGCTCCCCCATGTGGGCGTTCCTGCAATTCGGGGCAATCCTGCATGTGGGCATTGGAGGCaaccatagctgtatggatctgtgcaaAACTGCAACAAAAGCAGCAGTTGACTACTccattgtatttgaaaataccgTGTAGCGCACCTATCCCAGTGTCCCAGAGGAGGAATAGAAGCCAGGCCAACCAACCAGgaggtgtttctctctcttcatctcaaaCCACGAGCAGAGCAATTGCAAATGGATGGAAGAAAATTCCAGAAGCTGTAATGAACATTTGTGATTATCTAATGGCAGACCAAAGAATGGACATTACCTCTACGATGAATGAGTTCATGTCCCCCAGCTCCACCGAGCTGATCAGCAGCTCCATCAACACCCAAGGCATGGACTACACCCGCAAGAGGAAGGGCAGCACCTCCGACTACCAAATTGATGGATTTTCTTTTGACGAGAGCAGTATGGATACAGACAAGGATAAGCTTAGGGATTGTGGTGATCATCAGGGGCGGATCAAAAATGCCAGGGAGGCACACAGTCAGATTGAGAAGAGGCGCAGAGACAAGATGAACAGCTTTATAGACGAGCTGGCAGCGCTAGTGCCTACTTGCAACGCTATGTCCCGCAAGCTGGACAAACTCACAGTTCTACGCATGGCTGTTCAGCATATGAAGACATTACGAGGCGCAGCGAACCCATACACAGAGGCGAACTACAAGCCGTCTTTCCTGTCCGATGATGAATTGAAGCACTTAATATTGAGGGCTGCTGATGGCTTTCTGTTCGTCGTCGGATGCGATCGTGGGAAGATCCTCTTCGTCTCTGAGTCTGTTTACAAGATCCTCAACTATAGCCAGaATGACCTAATTGGCCAGAGTCTGTTTGATTACCTGCATCCTAaagacatcgccaaagtcaaggagcAACTGTCGTCATCGGATACAGCACCCCGGGAGCGACTCATCGACGCCAAAACTGGCCTGCCAGTGAAGACTGACATTACCCCTGGGCCGTCTAGACTGTGCTCCGGAGCCAGACGTTCTTTCTTCTGCCGTATGAAATGTAACCGGCCCTACGTCAAAACGGAGGACAAGGACTTCCCCTCCACCTGCTCAAAAAAGAAAGCTGACCGCAAGAGCTTCTGCACGATCCACAGTACTGGCTACCtgaagagctggccgcccagcaaGATGGGTTTGGACGATGACAACGAGCCCGACAACGAGCCCGACAACGAGGGCTGTAACCTCAGCTGCCTGGTGGCCATCGGCCGGCTGCACCCCCACATCATACCCCAGCCCTCCCATGAGGACATCCGCGTCAAACCCACCGAATACGTCTCCCGCCACGCCATCGACGGGAAGTTCGTCTTTGTTGACCAGAGGGCCACAGCCATTCTTGCGTACTTACCCCAGGAGCTTCTAGGCACCTCCTTCTACGAGTATTTTCATCAGGATGATATTGGCCACCTGGCAGAATGTCACAGACAAGTGCTGCAAATGAGAGAAAAGATCAACACAAACTGTTACAAGTTCAAGATTAAAGATGGCTCCTTCATCACGCTGAGAAGCTGCTGGTTTAGTTTCATGAATCCCTGGACAAAAGAGGTGGAGTACATTGTCTCCACAAACACAGTGGTCTCATGCAGTATGCTAGACGGTGCAGACCCCTATCCTCAGTCTGCTGCTTCCCCCACAGCCTCTATGGACAGTGTGCTGACGTCAGAAGGTGGAGGGAGACGGGCTATTCAGACGGTGCCAGGCATCCCTGGCGGAACACGGGCAGGTGCCGGCAAGATCGGCCGTATGATCGCAGAGGAGGTGATGGAGATTCAGAGGACCAGAGGCTCAACACCCTCTAGCTGTGGCTCCAGCCCCCTGAACATCAGCACCCCCCCTCCAGACTGCTCTCCAGGGAGCAAGAGGATTCAAAATGGTGGGACACCAGACCTTCCGTCGGCAGGAACACTACCAGGAGGACCTGACTCCATTGGATACCCATACTCCAACCAGTCCATTATGAGTGACAACTCTCATCTCAGCATTGACATCATGGACGAGCCAGGCTCCAGCAGCCCCAGTAACGATGAGGCAGCCATGGCTGTGATCATGAGTCTCCTGGAGGCTGACGCAGGCCTTGGGGGCCCCGTGGACTTTAGTGACTTACCCTGGCCCTTGTGATGACGGCCCAAGAGGAACGAGGCATAGCAGGACTGTTGGAACTCTTGGGCTAAGTCCCACAGAACTATGTCAAAACCCTGAATTGATGATGCAGTGGCATCATCAGGAACCATGGCACTGTGGGACTTATTGGAGCCGAGACCTCCATGTTGGGACTGAGACAGGTCATTTCAAAGTATACCTGTATGTGCCCTCCTTAGCTTGCTGCTGGACATTCTTCACCACAGGATAATTCAGCATTTTTCAATGGCTATTTTCCTGCATTATCCTACCAGGGATTTCTATTGAAAACCTGTTTGTGTTTGGATGTttttacactacagtacacattgGTTTTCCTTGTTGGATAACCCCATTTGAAAATGTCTTTAAATAGTATAATGTACAAAATACTTTATGCAAAATATATGGTGTGTGTATTGTATCCGCAGTGAAATATTAATTGTATCAGcagttaaatattttttattaaaagtTTGTTTTGTATCTCTTTCCAGAAGACTTTGAGCTATAAACAGAATTTGATGCAGTATGTTATTGACGCTAATGAATAAATTGTATCCATATTTACAATGTTCAAATGTCACTCTCATACTACCAGAAGCATTCTGAACATGAATCCAAGGGTGGGTGAGTGAATCATTCAGGGAATTGCATGTAACGGAAGCAattaaattaatttatttcacaGA
>XM_021575344.2
TTTAGAAAAACTAGGTTAGTGGTGCAGCACTGGTCATGACGGAGGGAGAAAGTAGGTCACAGACAGAGTAACGTTACCGTTTTATATCACAGTTCACGTAACATTAGACAGAGGGGTCCATTAGATGGAGATGTCCTAGCTAGTTCATCTCATGTAGCGCACCTATCCCAGTGTCCCAGAGGAGGAATAGAAGCCAGGCCAACCAACCAGgaggtgtttctctctcttcatctcaaaCCACGAGCAGAGCAATTGCAAATGGATGGAAGAAAATTCCAGAAGCTGTAATGAACATTTGTGATTATCTAATGGCAGACCAAAGAATGGACATTACCTCTACGATGAATGAGTTCATGTCCCCCAGCTCCACCGAGCTGATCAGCAGCTCCATCAACACCCAAGGCATGGACTACACCCGCAAGAGGAAGGGCAGCACCTCCGACTACCAAATTGATGGATTTTCTTTTGACGAGAGCAGTATGGATACAGACAAGGATAAGCTTAGGGATTGTGGTGATCATCAGGGGCGGATCAAAAATGCCAGGGAGGCACACAGTCAGATTGAGAAGAGGCGCAGAGACAAGATGAACAGCTTTATAGACGAGCTGGCAGCGCTAGTGCCTACTTGCAACGCTATGTCCCGCAAGCTGGACAAACTCACAGTTCTACGCATGGCTGTTCAGCATATGAAGACATTACGAGGCGCAGCGAACCCATACACAGAGGCGAACTACAAGCCGTCTTTCCTGTCCGATGATGAATTGAAGCACTTAATATTGAGGGCTGCTGATGGCTTTCTGTTCGTCGTCGGATGCGATCGTGGGAAGATCCTCTTCGTCTCTGAGTCTGTTTACAAGATCCTCAACTATAGCCAGaATGACCTAATTGGCCAGAGTCTGTTTGATTACCTGCATCCTAaagacatcgccaaagtcaaggagcAACTGTCGTCATCGGATACAGCACCCCGGGAGCGACTCATCGACGCCAAAACTGGCCTGCCAGTGAAGACTGACATTACCCCTGGGCCGTCTAGACTGTGCTCCGGAGCCAGACGTTCTTTCTTCTGCCGTATGAAATGTAACCGGCCCTACGTCAAAACGGAGGACAAGGACTTCCCCTCCACCTGCTCAAAAAAGAAAGCTGACCGCAAGAGCTTCTGCACGATCCACAGTACTGGCTACCtgaagagctggccgcccagcaaGATGGGTTTGGACGATGACAACGAGCCCGACAACGAGCCCGACAACGAGGGCTGTAACCTCAGCTGCCTGGTGGCCATCGGCCGGCTGCACCCCCACATCATACCCCAGCCCTCCCATGAGGACATCCGCGTCAAACCCACCGAATACGTCTCCCGCCACGCCATCGACGGGAAGTTCGTCTTTGTTGACCAGAGGGCCACAGCCATTCTTGCGTACTTACCCCAGGAGCTTCTAGGCACCTCCTTCTACGAGTATTTTCATCAGGATGATATTGGCCACCTGGCAGAATGTCACAGACAAGTGCTGCAAATGAGAGAAAAGATCAACACAAACTGTTACAAGTTCAAGATTAAAGATGGCTCCTTCATCACGCTGAGAAGCTGCTGGTTTAGTTTCATGAATCCCTGGACAAAAGAGGTGGAGTACATTGTCTCCACAAACACAGTGGTCTCATGCAGTATGCTAGACGGTGCAGACCCCTATCCTCAGTCTGCTGCTTCCCCCACAGCCTCTATGGACAGTGTGCTGACGTCAGAAGGTGGAGGGAGACGGGCTATTCAGACGGTGCCAGGCATCCCTGGCGGAACACGGGCAGGTGCCGGCAAGATCGGCCGTATGATCGCAGAGGAGGTGATGGAGATTCAGAGGACCAGAGGCTCAACACCCTCTAGCTGTGGCTCCAGCCCCCTGAACATCAGCACCCCCCCTCCAGACTGCTCTCCAGGGAGCAAGAGGATTCAAAATGGTGGGACACCAGACCTTCCGTCGGCAGGAACACTACCAGGAGGACCTGACTCCATTGGATACCCATACTCCAACCAGTCCATTATGAGTGACAACTCTCATCTCAGCATTGACATCATGGACGAGCCAGGCTCCAGCAGCCCCAGTAACGATGAGGCAGCCATGGCTGTGATCATGAGTCTCCTGGAGGCTGACGCAGGCCTTGGGGGCCCCGTGGACTTTAGTGACTTACCCTGGCCCTTGTGATGACGGCCCAAGAGGAACGAGGCATAGCAGGACTGTTGGAACTCTTGGGCTAAGTCCCACAGAACTATGTCAAAACCCTGAATTGATGATGCAGTGGCATCATCAGGAACCATGGCACTGTGGGACTTATTGGAGCCGAGACCTCCATGTTGGGACTGAGACAGGTCATTTCAAAGTATACCTGTATGTGCCCTCCTTAGCTTGCTGCTGGACATTCTTCACCACAGGATAATTCAGCATTTTTCAATGGCTATTTTCCTGCATTATCCTACCAGGGATTTCTATTGAAAACCTGTTTGTGTTTGGATGTttttacactacagtacacattgGTTTTCCTTGTTGGATAACCCCATTTGAAAATGTCTTTAAATAGTATAATGTACAAAATACTTTATGCAAAATATATGGTGTGTGTATTGTATCCGCAGTGAAATATTAATTGTATCAGcagttaaatattttttattaaaagtTTGTTTTGTATCTCTTTCCAGAAGACTTTGAGCTATAAACAGAATTTGATGCAGTATGTTATTGACGCTAATGAATAAATTGTATCCATATTTACAATGTTCAAATGTCACTCTCATACTACCAGAAGCATTCTGAACATGAATCCAAGGGTGGGTGAGTGAATCATTCAGGGAATTGCATGTAACGGAAGCAattaaattaatttatttcacaGA

Function

NR:

description
aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1

GO:

id name namespace
GO:0009648 photoperiodism biological_process
GO:0007623 circadian rhythm biological_process
GO:0045892 negative regulation of transcription, DNA-templated biological_process
GO:0045893 positive regulation of transcription, DNA-templated biological_process
GO:0007165 signal transduction biological_process
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003677 DNA binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
K02296 ARNTL, BMAL1, CYC; aryl hydrocarbon receptor nuclear translocator-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575350.2 False 2919 mRNA 0.49 21 86938295 86967493
XM_036958066.1 False 3145 mRNA 0.49 22 86938295 86967495
XM_021575336.2 False 3062 mRNA 0.49 22 86938295 86967497
XM_021575339.2 False 3369 mRNA 0.48 20 86938295 86967497
XM_021575334.2 False 3411 mRNA 0.48 21 86938295 86967498
XM_021575344.2 True 2890 mRNA 0.49 20 86938295 86967505

Neighbor

gene id symbol gene type direction distance location
LOC118942938 LOC106561453 coding downstream 50956 86885163 ~ 86887339 (-)
LOC110533876 NA coding downstream 190981 86743932 ~ 86747314 (-)
zpd LOC106594968 coding downstream 219123 86715060 ~ 86719172 (-)
LOC110498636 LOC106561446 coding downstream 223299 86707476 ~ 86714996 (-)
LOC118942936 LOC106611498 coding downstream 237044 86699341 ~ 86701251 (-)
rassf10a LOC106561459 coding upstream 69789 87037294 ~ 87039516 (-)
LOC110498779 LOC106561460 coding upstream 76384 87043889 ~ 87138769 (-)
LOC110498811 NA coding upstream 177218 87144723 ~ 87150107 (-)
mical2b LOC106573205 coding upstream 202605 87170110 ~ 87259603 (-)
LOC110498882 NA coding upstream 396745 87364250 ~ 87366299 (-)
G198334 LOC106561456 non-coding downstream 1114 86935403 ~ 86937181 (-)
G198231 NA non-coding downstream 65095 86871246 ~ 86873200 (-)
G198230 NA non-coding downstream 67660 86870424 ~ 86870635 (-)
G198224 NA non-coding downstream 75034 86862908 ~ 86863261 (-)
G198074 NA non-coding downstream 177363 86760709 ~ 86760932 (-)
G198543 NA non-coding upstream 143016 87110521 ~ 87110780 (-)
G198547 NA non-coding upstream 145917 87113422 ~ 87113621 (-)
G198552 NA non-coding upstream 155238 87122743 ~ 87123099 (-)
G198562 NA non-coding upstream 165514 87133019 ~ 87133236 (-)
G198676 NA non-coding upstream 254947 87222452 ~ 87223378 (-)
G198342 LOC100194703 other downstream 34339 86903036 ~ 86903956 (-)
G197554 NA other downstream 974630 85959845 ~ 85963665 (-)
G197498 slc25a18 other downstream 1094802 85831239 ~ 85843493 (-)
LOC110498022 LOC106561385 other downstream 2298539 84596433 ~ 84910878 (-)
G195486 LOC106573171 other downstream 2956128 83977965 ~ 83982167 (-)
G198912 NA other upstream 354634 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 2639332 89606837 ~ 89609890 (-)
G202279 NA other upstream 3410052 90377557 ~ 90441425 (-)
G203915 rassf9 other upstream 4621707 91589212 ~ 91591049 (-)
G204024 NA other upstream 4819682 91787187 ~ 91788103 (-)

Expression


Co-expression Network