dkk3b (LOC106561478)


Basic Information

Item Value
gene id dkk3b
gene name LOC106561478
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 87267934 ~ 87276184 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575509.2
TTTTCCCTTTTGAGTTTCCAAATAAAACAGCTGTGCTTTGTGTGCGTCAGCGTCTTTGCATGCTGTTGGTACAAGTATGTCTGGTCCCACCACGAGGATGATGCAGGTTGCAGCGCTTACtttttgtttgtgtttagtgaatgGAATCTCGAGCCCGAAGACCATCCCGGACATCTCGATAACTGGTGTTAGTTTCGAGGACCATTTGAATGGAGGTCATGCGACTCTAAACGAAATGTTCCGAGAGGTGGAGATGTTGATGGAGGACACGCAGCACGTACTGGAGGAAGCTGTGGATCAGATGGTCAATGAGAGTGCCAAATCATTGCTTAATATACAGGATTTGCTTCCAAACTACCACAATGAGACCAGTACATATAGGGACAACAGGAACCACACTGTTTACATGGCGGAGAGGATTGACAAGGAaatggacaacagaacaggggggACTCACTTCCAGACCCATATCGAGATCAATGGCCAATGGAACGAAGTTGATCATGAATGCATGCTTGATGAAGATTGTGGTAAGAACAGTTACTGCCTATATGAGATAGTAAACTCCAAGTGCCTCCCCTGCAAAGATGTTGATATGacctgcACAAAGGATGAAGAGTGTTGTTCAGAccagatgtgtgtgtggggacaGTGCACTAAGAATGCCACCAAGGGCAATGCAGGCAGCATCTGTCAGTACCAGAGTGACTGTAAGCCAAAACACTGCTGTGCCGTTCTCAAAGAGCTGCTCTTCCCAGTGTGCCAGCCCAGGCCGGATAAGGGTGAAGCGTGCAACAGCCACCCTAACTTGCTGATGGACATGCTGTCCTGGGACGTGGAGGGGCCGAGGGAATACTGCCTCTGTGCTGGTGGACTCCACTGCCAACCCCATGGaCGCGGATCCCTGTGTGTGAACTAGGTGACCATCAGATACAGTGAAGAGGACTCATTCCTTTAGATGAGACATGGTTGTGTGTTTTCTGGAAACTTCTGACTGGGCTCTAGTATCGGTCTGGCAATGTTAGACAGACAATGGCCGAACCAGATGAAAATGGGGCTGACAGATGTGTTCTCAACCACATCAACTAACCAAGCAAAGCACTCATGATGTAATTtgaataaataaacatttttctTGTA

Function

NR:

description
dickkopf-related protein 3-like

GO:      GO:0044699

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575509.2 True 1140 mRNA 0.48 7 87267934 87276184

Neighbor

gene id symbol gene type direction distance location
si:ch211-266k8.4 LOC106561457 coding upstream 240381 86973327 ~ 87027553 (+)
LOC110498720 LOC106561456 coding upstream 330717 86910470 ~ 86937217 (+)
LOC118942939 NA coding upstream 379908 86887279 ~ 86888026 (+)
zgc:162634 NA coding upstream 382562 86884172 ~ 86898082 (+)
LOC110498682 LOC106561452 coding upstream 394669 86787804 ~ 86873265 (+)
far1 LOC106561480 coding downstream 12578 87288762 ~ 87323586 (+)
LOC118937298 ovch2 coding downstream 59613 87335797 ~ 87338557 (+)
LOC118942946 ovch2 coding downstream 64726 87340910 ~ 87341891 (+)
LOC110498866 ovch2 coding downstream 69414 87345598 ~ 87351199 (+)
LOC118942948 ovch2 coding downstream 75256 87351440 ~ 87353703 (+)
G198651 NA non-coding upstream 2313 87265261 ~ 87265621 (+)
G198650 LOC107575789 non-coding upstream 2949 87264754 ~ 87264985 (+)
G198589 NA non-coding upstream 98286 87169341 ~ 87169648 (+)
G198587 NA non-coding upstream 99978 87167753 ~ 87167956 (+)
G198586 NA non-coding upstream 100395 87167307 ~ 87167539 (+)
G198717 NA non-coding downstream 27877 87304061 ~ 87304260 (+)
G198721 NA non-coding downstream 43404 87319588 ~ 87319880 (+)
G198710 NA non-coding downstream 48309 87324493 ~ 87325503 (+)
G198711 NA non-coding downstream 49396 87325580 ~ 87326445 (+)
G198728 NA non-coding downstream 63798 87339982 ~ 87340238 (+)
G198575 NA other upstream 117444 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 228698 87037511 ~ 87039236 (+)
G197069 NA other upstream 1131326 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 2247900 85010068 ~ 85054392 (+)
G195155 NA other upstream 2667610 84596410 ~ 84600324 (+)
G198784 NA other downstream 217439 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 259752 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 590693 87866877 ~ 87867967 (+)
LOC110499234 rbl2 other downstream 2143585 89395057 ~ 89422438 (+)
G202039 NA other downstream 3170934 90447118 ~ 90447573 (+)

Expression


Co-expression Network