far1 (LOC106561480)


Basic Information

Item Value
gene id far1
gene name LOC106561480
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 87288762 ~ 87323586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575520.2
CTAATGAATACGCCCGTTCTCTCAGCCCGCAAAAATTGAGCTGTTGCGGCACTTACAACCGGCAGATACTTCTGATTTAACGCAGGAAAACTCAGCCCCCTCGAAATTGCAGGTGGCGTTGTTGAGGAAGGTTGGAGCACACATACAAAATGGTGACCATTCCTGAGTACTATGAGGGGAAGAATGTGCTGATCACAGGGGCCACAGGCTTTATGGGAAAAGTCCTGCTGGAGAAGCTGATGCGGTCCTGCCCTGGAGTCAAGGCTGTGTACGTCCTTGTCCGGCACAAAGCGGGCCACGCTCCCCTGGCCCGCATCGCAGACATGTTCAACTGCAAGCTTTTTGACAGGTTACGAGATGAGCAGCCAGACTTTGCTGAGAAGATAGTGGCTGTGAACAGTGACCTCACCCTGCCAGAACTGGACCTGAGCAAAGTGGACCAGGAAACGCTTGCTGACTGCATCAACATAGTCTTCCACTGTGCTGCAACCATCCGATTCAATGAGCCTCTAAAAGATGCTATGCTACTGAATGTTCTAGCCACCCAGAAGATGGTGGCTCTTGCCCACAAAATGAAGCACTTGGAGGTGTTCCTCCACGTATCTACAGCCTACGCCAACTGTGACCGGACACTCATTGAGGAAGTGGTTTACCCACCTCCTGTTGACTACAAGAAGCTCATTGACAGCCTAGAATGGATGGATGAGAAGCTGGTCTCTGCGATGACCCCAGGGCTGATAGGAAAAAGGCCCAACACGTACACCTACACCAAGGCCATAGCTGAGTACTTGGTCCAGCAGGAGTGTGGAAACCTCAACGTGGCTATAATCAGGCCTTCTATAGTAGGGGCCAGTTGGAAAGAGCCGTTCCCAGGCTGGATTGATAATTTCAATGGACCTAGTGGAATATTCATTGCAGCAGGAAAGGGGATCCTTCGCACCATGAGAGCGTCCAACAACGCGGTGGCTGACCTGGTGCCTGTGGACGCGGTCATCAATACCACACTGGCTGCTGCCTGGTACTCAGGCTCCCAGAGACACACCAgGCCTAAGAGCATATTGGTGTACAATTGCACGACTGGCAGCATCAACCCGTTCCACTGGGGTGAAGTTGAGTACCATGTTATATCCACTTTCAAGAGGAACCCCCTCGAGCAGGCCTTCAGACGGCCCAATGTAAATCTCACAACCAATCACCTTATCAATCAGTACTGGATCGCTGTAAGCCACAAGGCACCAGCCTTCCTTTATGATCTCTGCCTCAGGATGACGGGAAGAGAGCCCAGGATGATGAAGACCATTACGAGGCTGCACAGGGCCATGATGGTGCTGGAGTACTTCACGAGCCATTCGTGGGTGTGGAAAAATGACAACGTCACCATGCTCATGAACCAGATGGGTGCTGATGACAAGAGGACATTCAACTTTGACGTGCGACAGCTGAACTGGGCAGAGTACATGGAGAACTACTGCATGGGGACTAAGAAGTATGTCCTGAACGAGGCTGAGTCCGGCCTGCCAGCAGCACGCAAACACCTCAACAAGTTGAGGAACATCCGCTACACGTTCAACACGGTCCTGGTCGTGTTCATCTGGCGAGTGTTCATCGCTCGGTCCCAGATGGCCAGGAACATCTGGTACATTGTGGTCAGCCTCTGCTTTAAGTTCCTGTCCTATTTCCGAGCATCCAGCACCATGAAATACTGAGTCCACGTGGTGTACTCACCTTGACCCCATCCACTCTCCTCAATCCAGCAGCCCCAGTCCgccttctctccctcctgcccagCCCCCCTTCAGATAGCTATGTATTCGACAAGGCTCTGCAAATCCTATAATATTTTGAGTTACTTAAGTGTCTGACATACTATTAATCTACTGTATGTGAAATGTCCCCTTTTCTTTGCAGTGTGATCCCTGATGTGGGGGGTAGAACTGCATTTGACTAAGCATGAATCTAATCAGACCCCTGGTCTTATGATGCTCACCTTGTACATTGATAGTCAGCCAAACAGAGTTATTGATGCCTAGTTTGGTTGTCATGGAGATGGAGCATTGCTTTGCTGACAGCCCCCAGGGTGGTCAGGCGGTGGTTTTGATTAACAGTTTACATTTTCCTGCTTGAATAGGGGTAAAGGCACCCATATACTGTATGCTTGATGGTGGCAATGACTATTACACAATGACATGATCAAGCACAAGGTAGATGGTAATATATAGGCTTTTTACAGTGCCTAACAGGTATGATTATCTTGCATCAGCTGACCTTGCAGAGCTATGTATTTTTGAATTGTTTTAAAACAATTTTCAAACCATTTCTGACTGGACTGTCCGCTTATGATTCTGGCCCAAATACCTCATAGCTCATGTAGCTCAGATCAGGCAACTGCTCAGAGGACTTGATTTTGGAGAGTTTGGGTAGGTAGTCTAAGGGCTCTTTACACTGCTTTCACTGATGACAGCTATCAGAAATTTGCATCtatgtccattttaaaataatgAGTAACTGTCTTTccccatgttggtcatttatttAACTGTCTGAAATGGGAGCGTTGTGTTCTGCTTATGCATCTCACGTGTTTTGCCTGTTGTCGAGTTTGGGATATTCCATGCATGGGGAGAGGCCTCTTCTCTTCCGAacacctttatctctgtctcatgCTATAATAACTTTCAAAGGTGGTCTTTAACCAATGTTTGCCTGGGTTGTTGGGCACTTGTAAAAATTTTTACTTGTTTTTACTTGTCCCTTTTCCATGTTGTCTTGTACATATTGTCTTAAGATGTTGGACTTACTGTGCACTTTCCTGTGGTTGTATGCTGCATGATATTCATTCGGAATGTCCAATTGTCATAGTCACttatacctacagttgaagtcggaagtttacatacaccttagccaaatacatttaaactcatttaatcctagtaaaaattctgtctttggtcagttaggatcacacctttgttttaagaacgtgaaatgtcagaataatagtag
>XM_021575528.2
CTAATGAATACGCCCGTTCTCTCAGCCCGCAAAAATTGAGCTGTTGCGGCACTTACAACCGGCAGATACTTCTGATTTAACGCAGGAAAACTCAGCCCCCTCGAAATTGCAGGTGGCGTTGTTGAGGAAGGTTGGAGCACACATACAAAATGGTGACCATTCCTGAGTACTATGAGGGGAAGAATGTGCTGATCACAGGGGCCACAGGCTTTATGGGAAAAGTCCTGCTGGAGAAGCTGATGCGGTCCTGCCCTGGAGTCAAGGCTGTGTACGTCCTTGTCCGGCACAAAGCGGGCCACGCTCCCCTGGCCCGCATCGCAGACATGTTCAACTGCAAGCTTTTTGACAGGTTACGAGATGAGCAGCCAGACTTTGCTGAGAAGATAGTGGCTGTGAACAGTGACCTCACCCTGCCAGAACTGGACCTGAGCAAAGTGGACCAGGAAACGCTTGCTGACTGCATCAACATAGTCTTCCACTGTGCTGCAACCATCCGATTCAATGAGCCTCTAAAAGATGCTATGCTACTGAATGTTCTAGCCACCCAGAAGATGGTGGCTCTTGCCCACAAAATGAAGCACTTGGAGGTGTTCCTCCACGTATCTACAGCCTACGCCAACTGTGACCGGACACTCATTGAGGAAGTGGTTTACCCACCTCCTGTTGACTACAAGAAGCTCATTGACAGCCTAGAATGGATGGATGAGAAGCTGGTCTCTGCGATGACCCCAGGGCTGATAGGAAAAAGGCCCAACACGTACACCTACACCAAGGCCATAGCTGAGTACTTGGTCCAGCAGGAGTGTGGAAACCTCAACGTGGCTATAATCAGGCCTTCTATAGTAGGGGCCAGTTGGAAAGAGCCGTTCCCAGGCTGGATTGATAATTTCAATGGACCTAGTGGAATATTCATTGCAGCAGGAAAGGGGATCCTTCGCACCATGAGAGCGTCCAACAACGCGGTGGCTGACCTGGTGCCTGTGGACGCGGTCATCAATACCACACTGGCTGCTGCCTGGTACTCAGGCTCCCAGAGACACACCAgGATGATGAAGACCATTACGAGGCTGCACAGGGCCATGATGGTGCTGGAGTACTTCACGAGCCATTCGTGGGTGTGGAAAAATGACAACGTCACCATGCTCATGAACCAGATGGGTGCTGATGACAAGAGGACATTCAACTTTGACGTGCGACAGCTGAACTGGGCAGAGTACATGGAGAACTACTGCATGGGGACTAAGAAGTATGTCCTGAACGAGGCTGAGTCCGGCCTGCCAGCAGCACGCAAACACCTCAACAAGTTGAGGAACATCCGCTACACGTTCAACACGGTCCTGGTCGTGTTCATCTGGCGAGTGTTCATCGCTCGGTCCCAGATGGCCAGGAACATCTGGTACATTGTGGTCAGCCTCTGCTTTAAGTTCCTGTCCTATTTCCGAGCATCCAGCACCATGAAATACTGAGTCCACGTGGTGTACTCACCTTGACCCCATCCACTCTCCTCAATCCAGCAGCCCCAGTCCgccttctctccctcctgcccagCCCCCCTTCAGATAGCTATGTATTCGACAAGGCTCTGCAAATCCTATAATATTTTGAGTTACTTAAGTGTCTGACATACTATTAATCTACTGTATGTGAAATGTCCCCTTTTCTTTGCAGTGTGATCCCTGATGTGGGGGGTAGAACTGCATTTGACTAAGCATGAATCTAATCAGACCCCTGGTCTTATGATGCTCACCTTGTACATTGATAGTCAGCCAAACAGAGTTATTGATGCCTAGTTTGGTTGTCATGGAGATGGAGCATTGCTTTGCTGACAGCCCCCAGGGTGGTCAGGCGGTGGTTTTGATTAACAGTTTACATTTTCCTGCTTGAATAGGGGTAAAGGCACCCATATACTGTATGCTTGATGGTGGCAATGACTATTACACAATGACATGATCAAGCACAAGGTAGATGGTAATATATAGGCTTTTTACAGTGCCTAACAGGTATGATTATCTTGCATCAGCTGACCTTGCAGAGCTATGTATTTTTGAATTGTTTTAAAACAATTTTCAAACCATTTCTGACTGGACTGTCCGCTTATGATTCTGGCCCAAATACCTCATAGCTCATGTAGCTCAGATCAGGCAACTGCTCAGAGGACTTGATTTTGGAGAGTTTGGGTAGGTAGTCTAAGGGCTCTTTACACTGCTTTCACTGATGACAGCTATCAGAAATTTGCATCtatgtccattttaaaataatgAGTAACTGTCTTTccccatgttggtcatttatttAACTGTCTGAAATGGGAGCGTTGTGTTCTGCTTATGCATCTCACGTGTTTTGCCTGTTGTCGAGTTTGGGATATTCCATGCATGGGGAGAGGCCTCTTCTCTTCCGAacacctttatctctgtctcatgCTATAATAACTTTCAAAGGTGGTCTTTAACCAATGTTTGCCTGGGTTGTTGGGCACTTGTAAAAATTTTTACTTGTTTTTACTTGTCCCTTTTCCATGTTGTCTTGTACATATTGTCTTAAGATGTTGGACTTACTGTGCACTTTCCTGTGGTTGTATGCTGCATGATATTCATTCGGAATGTCCAATTGTCATAGTCACttatacctacagttgaagtcggaagtttacatacaccttagccaaatacatttaaactcatttaatcctagtaaaaattctgtctttggtcagttaggatcacacctttgttttaagaacgtgaaatgtcagaataatagtag

Function

NR:

description
fatty acyl-CoA reductase 1-like isoform X2

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575520.2 False 3006 mRNA 0.47 12 87288762 87323586
XM_021575528.2 True 2766 mRNA 0.47 10 87288762 87323586

Neighbor

gene id symbol gene type direction distance location
dkk3b LOC106561478 coding upstream 12578 87267934 ~ 87276184 (+)
si:ch211-266k8.4 LOC106561457 coding upstream 261209 86973327 ~ 87027553 (+)
LOC110498720 LOC106561456 coding upstream 351545 86910470 ~ 86937217 (+)
LOC118942939 NA coding upstream 400736 86887279 ~ 86888026 (+)
zgc:162634 NA coding upstream 403390 86884172 ~ 86898082 (+)
LOC118937298 ovch2 coding downstream 12211 87335797 ~ 87338557 (+)
LOC118942946 ovch2 coding downstream 17324 87340910 ~ 87341891 (+)
LOC110498866 ovch2 coding downstream 22012 87345598 ~ 87351199 (+)
LOC118942948 ovch2 coding downstream 27854 87351440 ~ 87353703 (+)
LOC110498941 ccdc73 coding downstream 588946 87912532 ~ 87931639 (+)
G198651 NA non-coding upstream 23141 87265261 ~ 87265621 (+)
G198650 LOC107575789 non-coding upstream 23777 87264754 ~ 87264985 (+)
G198589 NA non-coding upstream 119114 87169341 ~ 87169648 (+)
G198587 NA non-coding upstream 120806 87167753 ~ 87167956 (+)
G198586 NA non-coding upstream 121223 87167307 ~ 87167539 (+)
G198710 NA non-coding downstream 907 87324493 ~ 87325503 (+)
G198711 NA non-coding downstream 1994 87325580 ~ 87326445 (+)
G198728 NA non-coding downstream 16396 87339982 ~ 87340238 (+)
G198737 NA non-coding downstream 35938 87359524 ~ 87360204 (+)
G198739 NA non-coding downstream 46961 87370547 ~ 87372391 (+)
G198575 NA other upstream 138272 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 249526 87037511 ~ 87039236 (+)
G197069 NA other upstream 1152154 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 2268728 85010068 ~ 85054392 (+)
G195155 NA other upstream 2688438 84596410 ~ 84600324 (+)
G198784 NA other downstream 170037 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 212350 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 543291 87866877 ~ 87867967 (+)
LOC110499234 rbl2 other downstream 2096183 89395057 ~ 89422438 (+)
G202039 NA other downstream 3123532 90447118 ~ 90447573 (+)

Expression


Co-expression Network