LOC118942946 (ovch2)


Basic Information

Item Value
gene id LOC118942946
gene name ovch2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 87340910 ~ 87341891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038646.1
CCCAGGGAGGACGGCCACTGGGTCGTGGTGGGGGTCACCTCCTGGGGGAAAGGTTGTGGCCGTAGCTGGATCAACAACAAGGCCAAGTCGTCGGCCAAGAGAGGATCCCCGGGGGTATTCACTGACGTCAAGATGCTCCTGCCCTGGATCAAGATGAAACTCAGAGAAGCAGATGCTAACCCAAACCAAAGGCCCAACTCAAGACTGTGCAGTGTGAGGGATGGGCTTGTGAGCGGTAGTGAGGGTCTCATCAGAAACCCAAGCCTCTCAGGCCATCTCTACAACAACAATGAGTGGGTGTAATCCAGTGACAGTGCACAGGCCCGTTGCAGACGGGGAGTGAGGGAGAGCTGTGCTGAACTGAATGCGCTCATTGAATGCCCTTGAATTAAGTATGCTTTTAGGACTATTTATTTTCCGACCAATTTGCCCTCACCACTCCCCGGCTGGCACAGAACATTCTAAccaccatatgtttcttagagcttggtgagagggGGAGTGGTTATGGTTATTTAGCagacaaccttcccacaactttctggaaATGTTGAAGCATAGTttcttggctttggaacattctcagcacatttttATGAACTTGACAAAAAACATAATTGTCCTGctatttaaagggatacttcaggattttggcaatgaggcccttaatcta

Function

symbol description
ovch2 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be active in plasma membrane.

NR:

description
PREDICTED: ovochymase-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038646.1 True 673 mRNA 0.49 3 87340910 87341891

Neighbor

gene id symbol gene type direction distance location
LOC118937298 ovch2 coding upstream 2353 87335797 ~ 87338557 (+)
far1 LOC106561480 coding upstream 17324 87288762 ~ 87323586 (+)
dkk3b LOC106561478 coding upstream 64726 87267934 ~ 87276184 (+)
si:ch211-266k8.4 LOC106561457 coding upstream 313357 86973327 ~ 87027553 (+)
LOC110498720 LOC106561456 coding upstream 403693 86910470 ~ 86937217 (+)
LOC110498866 ovch2 coding downstream 3707 87345598 ~ 87351199 (+)
LOC118942948 ovch2 coding downstream 9549 87351440 ~ 87353703 (+)
LOC110498941 ccdc73 coding downstream 570641 87912532 ~ 87931639 (+)
wt-t1b wt1 coding downstream 604582 87946473 ~ 87966277 (+)
LOC110498955 LOC105030318 coding downstream 708207 88050098 ~ 88070895 (+)
G198728 NA non-coding upstream 672 87339982 ~ 87340238 (+)
G198711 NA non-coding upstream 14465 87325580 ~ 87326445 (+)
G198710 NA non-coding upstream 15407 87324493 ~ 87325503 (+)
G198721 NA non-coding upstream 21030 87319588 ~ 87319880 (+)
G198717 NA non-coding upstream 36650 87304061 ~ 87304260 (+)
G198737 NA non-coding downstream 17633 87359524 ~ 87360204 (+)
G198739 NA non-coding downstream 28656 87370547 ~ 87372391 (+)
G198782 NA non-coding downstream 156403 87498294 ~ 87499092 (+)
G198783 NA non-coding downstream 157956 87499847 ~ 87500124 (+)
G198820 NA non-coding downstream 202488 87544379 ~ 87544579 (+)
G198575 NA other upstream 190420 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 301674 87037511 ~ 87039236 (+)
G197069 NA other upstream 1204302 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 2320876 85010068 ~ 85054392 (+)
G195155 NA other upstream 2740586 84596410 ~ 84600324 (+)
G198784 NA other downstream 151732 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 194045 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 524986 87866877 ~ 87867967 (+)
LOC110499234 rbl2 other downstream 2077878 89395057 ~ 89422438 (+)
G202039 NA other downstream 3105227 90447118 ~ 90447573 (+)

Expression


Co-expression Network