LOC110498866 (ovch2)


Basic Information

Item Value
gene id LOC110498866
gene name ovch2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 87345598 ~ 87351199 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958218.1
TACTTCAActttatatcctaatctgactttgatGCAGGCCATTAAGGCTAAGCGTCCCGCTAGTGGGACAACTTCTGATGAGTCTGGAGAgcacgcaattcaaataaataatcataacaattatggattttaaacatttatgtacCTACAAATATtttatatcggttgaaagcttaaattacattacagtaaacatctttctctctctctcgtaggaTATGTTCCTGGTCCATCAGCGTTCCTATAGGGAGGAGTATTCTGCTGGAATTCTTGGAATTCGACATGGAGAATGACACCCTCTGTCACAGTGACCAACTCACGGTATCTGTGGGTGCAGACTCAGGGAGGCCTATTGGGAGGTTCTGTGGCAGCGCCCCGCCGCCCCCAGTGCTCATCAACTCCCACAGTGCTTCTCTCCAATTTGTGTCTGATGTCAGTGGAACAGGAAGCGGATTTGTTGTTAGATTCCGAGGTGTCGAGGGAAATTCTGTGCCTGCGTCGGGATGTGGCACCGTGGCTCTGGTCCAGGATCAGAGGGCCGTACACAGTCTCAACTACCCACAATCCTACAGCAACAACTCTGTCTGCCACTGGGTCATCTACGCCCCCAAGGGTCACGTTGTCAAGCTTGACTTTGATGACTTTGAACTGGAGCAATCGGATGACTGCGAGTATGACTCGCTGATTGTTCTTGGAGATGTGTATACAAAAGAGGAGATAGCGGTGCTGTGTGGTAGGAATGTGCCTCCCCCCGTTCTGAGCTATGACAACGTGATGGTCCTCCAGTTCACCTCTGATAGCACAGTCACCTACCGAGGCTTCCACGCCACTGTGTCATTCATCAGTAAGATCGACCTGCTGGATGGGGAGTCAGAGGATGACACTGTTCACTTTCAACACTCACTGCCAGACTCGTGTGGAATGCCTCATGTCCGTGCTGCCTCGACCTCCAGTGAGTCTCTGGAAGGAGCGGGGGAGTCGCGACACGCCTGGCCCTGGGACGTTCGGCTCAGCAAGGACACTAACAACATCTGCTATGGGGCCATCATCCAGCCTGCCTGGGTCCTCACTGCTGCACACTGCCTTCTAGGCCTGGAGGACCAATCATTAAGGTCACTGTTGGTGGAGACGGGAGGCCCGAAGAACCAGGTAGGATGAAGCATCCTCAGGCAGTCTAcccatctctcactctgtctctcactctgtctctcactctgtctctcac

Function

symbol description
ovch2 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be active in plasma membrane.

NR:

description
ovochymase-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958218.1 True 1225 mRNA 0.51 8 87345598 87351199

Neighbor

gene id symbol gene type direction distance location
LOC118942946 ovch2 coding upstream 3707 87340910 ~ 87341891 (+)
LOC118937298 ovch2 coding upstream 7041 87335797 ~ 87338557 (+)
far1 LOC106561480 coding upstream 22012 87288762 ~ 87323586 (+)
dkk3b LOC106561478 coding upstream 69414 87267934 ~ 87276184 (+)
si:ch211-266k8.4 LOC106561457 coding upstream 318045 86973327 ~ 87027553 (+)
LOC118942948 ovch2 coding downstream 241 87351440 ~ 87353703 (+)
LOC110498941 ccdc73 coding downstream 561333 87912532 ~ 87931639 (+)
wt-t1b wt1 coding downstream 595274 87946473 ~ 87966277 (+)
LOC110498955 LOC105030318 coding downstream 698899 88050098 ~ 88070895 (+)
mpped2 mppd2 coding downstream 1012112 88363311 ~ 88389495 (+)
G198728 NA non-coding upstream 5360 87339982 ~ 87340238 (+)
G198711 NA non-coding upstream 19153 87325580 ~ 87326445 (+)
G198710 NA non-coding upstream 20095 87324493 ~ 87325503 (+)
G198721 NA non-coding upstream 25718 87319588 ~ 87319880 (+)
G198717 NA non-coding upstream 41338 87304061 ~ 87304260 (+)
G198737 NA non-coding downstream 8325 87359524 ~ 87360204 (+)
G198739 NA non-coding downstream 19348 87370547 ~ 87372391 (+)
G198782 NA non-coding downstream 147095 87498294 ~ 87499092 (+)
G198783 NA non-coding downstream 148648 87499847 ~ 87500124 (+)
G198820 NA non-coding downstream 193180 87544379 ~ 87544579 (+)
G198575 NA other upstream 195108 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 306362 87037511 ~ 87039236 (+)
G197069 NA other upstream 1208990 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 2325564 85010068 ~ 85054392 (+)
G195155 NA other upstream 2745274 84596410 ~ 84600324 (+)
G198784 NA other downstream 142424 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 184737 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 515678 87866877 ~ 87867967 (+)
LOC110499234 rbl2 other downstream 2068570 89395057 ~ 89422438 (+)
G202039 NA other downstream 3095919 90447118 ~ 90447573 (+)

Expression


Co-expression Network