znf277 (znf277)


Basic Information

Item Value
gene id znf277
gene name znf277
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 88763558 ~ 88770972 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576089.2
AGGCGGGGGCTAAGGAAATGATATGGGCACTGGTGGTGCAGAACTGGCAGGAGCAGTGGAACAGCAACACTAAGGACAGGCATCTATATTCCCTGTTCAGAGTAAAGTCGGGGAGGATGGTATgaagggacagaagagaggaggccatTTTTACAAGGCTACGGGTGGGACACAGCCGGTTTAATAAGTAATTAATTATATGTGATAGGAAAGCGTCCAACAGGAAGGTGTGATTACCGCAAGACATTGGAgaggtgggtataatttgtggaacgttccaacaggaatccgTTCCAAAAACGTCTTAAagtacaaggttgccaacaaacgCATACAATGTAACATGATCAATTCACCTAACTTTTGCTAAATAACTATCGAGGCATCAACTCACCACGTAGCTTATTCTTAATGTTTGTCAATAGGTTACCAGagtgaggacagacatttttCGGAATAAACATGGTGAGTGAAAAACGTTATTAATTAGCCCACTCCCAACCCGGTTTCGTATTATGCCACTATACGACTTTGTATGCGTTATTTGTGGGCAACCTTGTTATTTACGAAGTTTTTGGATCAGATTCATGTTGGAACGTTGCAAAAATTATACCTACCAACATTGGAACATGTGCTGATACTGTGTGGGCAGTAtgatagggagagagactgagaatggGATCCAGTAATTGAGTTTAAGTAGCATACTGAGTTGAACATAGTTAGATACAATCACAAATATGTTGTTATATTTTTTTAAGAGAAACTTAGCTGGCAGATAGGATTCAGTTCCTCCCAGTACAGTGGGTGGCGCTAATGCACCATAACGTTGGATACCAACTGCCGATAAACGCCAAAGAAGAAGAACAGCCGTACGGCCGATAAACCGAACAGAAGAACGTCAGCTGTATTGACCACGTGACATTTGAAAATGGCTGCCTGCGTGGAGAAAAAAATAAATTCAGATGAACAGGAGTGGATACTGGAGCCTCTGTGTTTCCCTGAGCAGCCTGCTACAGACATCGGCACCAACTCATCCTCTCATCATGACATGGAGGTGGTGACCTGTGTGCTCTGCTCTCACTCCGCCCCTTTGTCAGAGAAGGACCGCCTCCTAAAGCACCTAGTACTGGTGCACAAGCTGGTCATCGCTGATGTCAAACTCATCGCTGACTTTCCTAAATACATGGAATACTGGAAGAACAGAATCTCTGAGCAACCCATCACAGATTTCTGCAGTGTGATCAAGACTAACTCGCAGGGCCCTGTTGAAAAACAGGAGCACTACTTCCTTCTGTGTGATGTCCTGCCAGAGGACAGGGTCCTCAGAGAACATCTCCAACAGAAACGACTGGAGGAGATCCTGGAGCagcagcagagggagagggatgacGACAGCTTCCAGCGCATCTGCATGTTCTGCAATGACGAGTTCAATGGGAACAGATCGTCACTGCTCAACCACATGGCCAGGGAGCACTCGTTCAGCGTGGGACTGCCTGACAACATAGTGTACTGCGTAGAGTTCCTTGACCACCTGCAGAGCAAACTGGATAAtcTGCAGTGCCTGTATTGTGAGAAAACATTCAGAGACAAGACGACACTGAAGGATCACATGAGAAAGAAACAGCACCGCAGAATCAATGGCAACAACAGCGAGTATGACTGCTTCTACATTATCAACTACCTGGAGCTGGGGAAAACATGGGAAGAGGTCCAATCTGAGGATGATCGGGAgatggaggatgaagatgaTGATTGGTCAGACTGGCAGGCTCACCCAGTGTGTGCTGTGTGCCTGTTCTGTGAGCAGCAGTCAGAGAGCATGGAGAAGATCTACACACACATGGAGGAAACCCACGGATTTGATCTGCACAAGTTGAAGACCGAACTCAATCTGCGGTTCTACCAGCAGGTCAAACTGGTAAACTACATCAGACGAGAGATCCACCAGTGCCGTTGCTACGGTTGCCAGGAAAAGTTTGGGTCCAAACCTGAGGTTATACGTCATGTAATGGAGGCAGGTCACGTGATGCAGCTACCAGAGACGTCAACCTGGGACCAACCACAGTATTACTTCCCCACCTATGAGAACGACGCCCTCCTCTGTGCCTTGTCGGACAGTGACAGTGAATCAGAACACACAGGCCCTTGGAGAGACGTCCCTGTCATAGCTGAGGACATCTCTAACCTGAAAGTCCTGAAGCAGACCAGCGTCCTCAGCCACCTTCTGAAGAACACAGACAGCTCTAGTTAAAAAGCTGGATGGATGGACCAATGATGTTATAAACTCAGTGGAGGATGCtcaggggagaacggctcatagaGGGACACAGTGCAACAACTTCTCGCTTCGCTGTATCTCCAACAAGACGGTGATGCTCATCAGACACTGTGCACTTAGCAGACCAGCACACATGTGCAGAAATGAACATGGCCTGTTTCATAAGAATTTCCTGAGCCTGGACTACATTTATGTATGATTTAATGTCATACTTGGTACAAATCACCATGTACAACATACCTGCAGGTGGATTTGTTTCATATAGTATGATTGCTGACAAAACGTGACCTCACTGCAGAGATGTGACAATTGCTAAATGTAAATAAACATTATGAATATACTATAACT
>XM_036958484.1
AGGCGGGGGCTAAGGAAATGATATGGGCACTGGTGGTGCAGAACTGGCAGGAGCAGTGGAACAGCAACACTAAGGACAGGCATCTATATTCCCTGTTCAGAGTAAAGTCGGGGAGGATGGTATgaagggacagaagagaggaggccatTTTTACAAGGCTACGGGTGGGACACAGCCGGTTTAATAAGTAATTAATTATATGTGATAGGAAAGCGTCCAACAGGAAGGTGTGATTACCGCAAGACATTGGAgagAGAAACTTAGCTGGCAGATAGGATTCAGTTCCTCCCAGTACAGTGGGTGGCGCTAATGCACCATAACGTTGGATACCAACTGCCGATAAACGCCAAAGAAGAAGAACAGCCGTACGGCCGATAAACCGAACAGAAGAACGTCAGCTGTATTGACCACGTGACATTTGAAAATGGCTGCCTGCGTGGAGAAAAAAATAAATTCAGATGAACAGGAGTGGATACTGGAGCCTCTGTGTTTCCCTGAGCAGCCTGCTACAGACATCGGCACCAACTCATCCTCTCATCATGACATGGAGGTGGTGACCTGTGTGCTCTGCTCTCACTCCGCCCCTTTGTCAGAGAAGGACCGCCTCCTAAAGCACCTAGTACTGGTGCACAAGCTGGTCATCGCTGATGTCAAACTCATCGCTGACTTTCCTAAATACATGGAATACTGGAAGAACAGAATCTCTGAGCAACCCATCACAGATTTCTGCAGTGTGATCAAGACTAACTCGCAGGGCCCTGTTGAAAAACAGGAGCACTACTTCCTTCTGTGTGATGTCCTGCCAGAGGACAGGGTCCTCAGAGAACATCTCCAACAGAAACGACTGGAGGAGATCCTGGAGCagcagcagagggagagggatgacGACAGCTTCCAGCGCATCTGCATGTTCTGCAATGACGAGTTCAATGGGAACAGATCGTCACTGCTCAACCACATGGCCAGGGAGCACTCGTTCAGCGTGGGACTGCCTGACAACATAGTGTACTGCGTAGAGTTCCTTGACCACCTGCAGAGCAAACTGGATAAtcTGCAGTGCCTGTATTGTGAGAAAACATTCAGAGACAAGACGACACTGAAGGATCACATGAGAAAGAAACAGCACCGCAGAATCAATGGCAACAACAGCGAGTATGACTGCTTCTACATTATCAACTACCTGGAGCTGGGGAAAACATGGGAAGAGGTCCAATCTGAGGATGATCGGGAgatggaggatgaagatgaTGATTGGTCAGACTGGCAGGCTCACCCAGTGTGTGCTGTGTGCCTGTTCTGTGAGCAGCAGTCAGAGAGCATGGAGAAGATCTACACACACATGGAGGAAACCCACGGATTTGATCTGCACAAGTTGAAGACCGAACTCAATCTGCGGTTCTACCAGCAGGTCAAACTGGTAAACTACATCAGACGAGAGATCCACCAGTGCCGTTGCTACGGTTGCCAGGAAAAGTTTGGGTCCAAACCTGAGGTTATACGTCATGTAATGGAGGCAGGTCACGTGATGCAGCTACCAGAGACGTCAACCTGGGACCAACCACAGTATTACTTCCCCACCTATGAGAACGACGCCCTCCTCTGTGCCTTGTCGGACAGTGACAGTGAATCAGAACACACAGGCCCTTGGAGAGACGTCCCTGTCATAGCTGAGGACATCTCTAACCTGAAAGTCCTGAAGCAGACCAGCGTCCTCAGCCACCTTCTGAAGAACACAGACAGCTCTAGTTAAAAAGCTGGATGGATGGACCAATGATGTTATAAACTCAGTGGAGGATGCtcaggggagaacggctcatagaGGGACACAGTGCAACAACTTCTCGCTTCGCTGTATCTCCAACAAGACGGTGATGCTCATCAGACACTGTGCACTTAGCAGACCAGCACACATGTGCAGAAATGAACATGGCCTGTTTCATAAGAATTTCCTGAGCCTGGACTACATTTATGTATGATTTAATGTCATACTTGGTACAAATCACCATGTACAACATACCTGCAGGTGGATTTGTTTCATATAGTATGATTGCTGACAAAACGTGACCTCACTGCAGAGATGTGACAATTGCTAAATGTAAATAAACATTATGAATATACTATAACT

Function

symbol description
znf277 Predicted to enable metal ion binding activity. Orthologous to human ZNF277 (zinc finger protein 277).

NR:

description
zinc finger protein 277 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576089.2 False 2632 mRNA 0.46 11 88763558 88770972
XM_036958484.1 True 2125 mRNA 0.48 12 88763558 88770972

Neighbor

gene id symbol gene type direction distance location
LOC110499075 LOC106561496 coding downstream 106606 88630479 ~ 88656952 (-)
LOC110499068 LOC106561495 coding downstream 189355 88569351 ~ 88574203 (-)
dnajc24 dnajc24 coding downstream 558085 88185028 ~ 88205473 (-)
LOC110498933 depdc7 coding downstream 852143 87907499 ~ 87911415 (-)
LOC110498926 hipk3 coding downstream 863133 87859357 ~ 87900425 (-)
LOC110533889 NA coding upstream 35116 88806088 ~ 88807501 (-)
LOC110499152 lrrn3 coding upstream 188400 88959372 ~ 88971921 (-)
amfra LOC106561518 coding upstream 281798 89052770 ~ 89069349 (-)
nfatc3b LOC106561519 coding upstream 308953 89079925 ~ 89100055 (-)
dus2 dus2 coding upstream 329285 89100257 ~ 89106727 (-)
G200253 NA non-coding downstream 52070 88655772 ~ 88711488 (-)
G200285 NA non-coding downstream 55099 88706620 ~ 88708459 (-)
G200240 NA non-coding downstream 137316 88623394 ~ 88626242 (-)
G200109 NA non-coding downstream 194843 88565870 ~ 88568715 (-)
G200041 NA non-coding downstream 284378 88478834 ~ 88479180 (-)
G200492 NA non-coding upstream 8010 88778982 ~ 88781586 (-)
G200496 NA non-coding upstream 13059 88784031 ~ 88784251 (-)
G200714 NA non-coding upstream 272279 89043251 ~ 89044998 (-)
G200716 NA non-coding upstream 275412 89046384 ~ 89048900 (-)
G200724 NA non-coding upstream 300120 89071092 ~ 89071566 (-)
G198912 NA other downstream 1437089 87322139 ~ 87326469 (-)
G198342 LOC100194703 other downstream 1859602 86903036 ~ 86903956 (-)
G197554 NA other downstream 2799893 85959845 ~ 85963665 (-)
G197498 slc25a18 other downstream 2920065 85831239 ~ 85843493 (-)
LOC110498022 LOC106561385 other downstream 4123802 84596433 ~ 84910878 (-)
LOC110499346 vps4a other upstream 835865 89606837 ~ 89609890 (-)
G202279 NA other upstream 1606585 90377557 ~ 90441425 (-)
G203915 rassf9 other upstream 2818240 91589212 ~ 91591049 (-)
G204024 NA other upstream 3016215 91787187 ~ 91788103 (-)
LOC110499897 LOC106573100 other upstream 3627088 92398054 ~ 92443838 (-)

Expression


Co-expression Network