hsd17b2 (hsd17b2)


Basic Information

Item Value
gene id hsd17b2
gene name hsd17b2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 89502075 ~ 89505985 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576291.2
GCAGTGACCGAGGGGTGGGGTTAATGTTTCTTTAAAGGTTACAGGGTTTTTCAGTTGAGGATACACTTGATATGCACATGTCAAAGAGCCAAGGGGATATCCAACAAAGGGGACAGGATATTGATACCTCTGATATCAGGAAAGAAAGAGCAAGACCAACCTGCCAGTGGATAGAATGGAGAGTGTTGACATTGAATTCTGGTatttctcttctctgtatacaatAGTTACAGCCCTATACATTGGGGCAATTATAACTAAGGCGAGAGGGAGTCATGATAGGGAATACTGGACCTTTGCACTTTTGGCTCTTGGGGGGCCTCTGTGCTTTTTGGCCCTTCCAGGCTACCGCAGTCTGCTCTTTCTGACCTGCAGCCTCTGGTTGTGCTATGTGGTTCTGGGCAGACGAGTGGACATGCTGACGATGCATGGAAGAGCTGTGCTGATTACAGGTTGTGATACAGGTTTTGGTCATGCCCTAGCGAGAAGGATTAGTGACTTGGGAGTGACTGTGTTTGCTGGGGTTCTGGATGAGACCAGCCCAGGAGCAGTGGAGCTGAAGAGACTGGGGTCTGAGGGGCTACAAGTCCTTCAGCTAGATGTGACAGACGCTGCGCAGATAGAGCGGGCTCACCACTACATTTGCACTCAGGTTGGGGACGCAGGTCTTTGGGGGATTGTGAATAATGCGGGAGTCCTGGGCTATGTGGCAGATGGAGAGATTCTTCCTGTGAGAGTATACAGGAACTGCTTGGCAGTGAACTTCCTTGCTGCAGTAGAGGTCTCTCAGGTGTTTCTTCCACTGCTCCGACACTCCAGGGGCAGGCTAGTCAACGTCTGCAGTATGGCAGGTGATGTGCCCGTTCCTGGGTTTGTGGCCTATGGAGCATCCAAAGCAGCCCTGAAcaccttctctggagtgatgagacTAGAGTTGGCCAGATGGGGCGTCAATGTATCCACAATTCAACCTGCAGGCTTCAAGACAAATATTTTCGGTAGCAGTGATGACTGGAGCCGTTACCAAGAGGAGATCTTCACCTCTCTATCCCAGGATGTCCGGAAGGACTACGGCGAGGCCTACATCTCCTCACTCCAGGCACGCTTTGCCAAGATGGCCGTCATGTCCTCAGAGGACCTGCGTCCCGTGCTAGATGACATGTGCCACGCCCTAATGTCAGTGGCTCCCAGACCCGTCTACACCCCTGGCCAGTCGGCCTGGCTCATTCCCTGCCTCCACCGCCTCTGCCCCACACGGTTCTATGACATGATTATTACAAGTCTGTTTCAGTTCAATAGCAGTCTGCCAGCTGGGCTCCAGGCAGGAGCCTCAGTGGGTTCGAAGACTTGATAACATGTGAGATAACTGATATGTGATGTCGGGCTATTCTTTCCCAAGGTTGTTTACGGGAATGCTTCCATAGATTagtatctctccatcttcccTCATGCTTGGTTGGCAGAGAAATGTGACTGTTGGCTTTGTACTTTTTTGGCAGCTTCATAAGCAAGGCTATTGAAAACCCTTGTTATTGTTTGAATGTAGTATGTTTTTGTCAATTTCTCACAAAACAAGACAAGCCACCACATTGGGTAACAGTTTTAATTCAACTATACCCTGGTCCATGGTACAAGGATGTGGGCTTCATTTCCTGTGTTCATAACCCTCAATGCATCTTGAAGAAATGTACTTTTAAAAAGAGGATATATAACATCCATTCAACTTTAAAATATATGTCTAACATCTTTGGAAGTTACCTACGGATCATGAAAACacagcagtaaaaataaaataaaaattgttgcACATAAAAACATTGTACAGTCCTGACATACTTCATTTAAATAAAAAGGCATCCCCTCA
>XM_021576309.2
GGCAGTGACCGAGGGGTGGGGTTAATGTTTCTTTAAAGGTTACAGGGTTTTTCAGTTGAGGATACACTTGATATGCACATGTCAAAGAGCCAAGGGGATATCCAACAAAGGGGACAGGATATTGATACCTCTGATATCAGGAAAGAAAGAGCAAGACCAACCTGCCAGTGGATAGAATGGAGAGTGTTGACATTGAATTCTGGTatttctcttctctgtatacaatAGTTACAGCCCTATACATTGGGGCAATTATAACTAAGGCGAGAGGGAGTCATGATAGGGAATACTGGACCTTTGCACTTTTGGCTCTTGGGGGGCCTCTGTGCTTTTTGGCCCTTCCAGGCTACCGCAGTCTGCTCTTTCTGACCTGCAGCCTCTGGTTGTGCTATGTGGTTCTGGGCAGACGAGTGGACATGCTGACGATGCATGGAAGAGCTGTGCTGATTACAGGTTGTGATACAGGTTTTGGTCATGCCCTAGCGAGAAGGATTAGTGACTTGGGAGTGACTGTGTTTGCTGGGGTTCTGGATGAGACCAGCCCAGGAGCAGTGGAGCTGAAGAGACTGGGGTCTGAGGGGCTACAAGTCCTTCAGCTAGATGTGACAGACGCTGCGCAGATAGAGCGGGCTCACCACTACATTTGCACTCAGGTTGGGGACGCAGGTGATGTGCCCGTTCCTGGGTTTGTGGCCTATGGAGCATCCAAAGCAGCCCTGAAcaccttctctggagtgatgagacTAGAGTTGGCCAGATGGGGCGTCAATGTATCCACAATTCAACCTGCAGGCTTCAAGACAAATATTTTCGGTAGCAGTGATGACTGGAGCCGTTACCAAGAGGAGATCTTCACCTCTCTATCCCAGGATGTCCGGAAGGACTACGGCGAGGCCTACATCTCCTCACTCCAGGCACGCTTTGCCAAGATGGCCGTCATGTCCTCAGAGGACCTGCGTCCCGTGCTAGATGACATGTGCCACGCCCTAATGTCAGTGGCTCCCAGACCCGTCTACACCCCTGGCCAGTCGGCCTGGCTCATTCCCTGCCTCCACCGCCTCTGCCCCACACGGTTCTATGACATGATTATTACAAGTCTGTTTCAGTTCAATAGCAGTCTGCCAGCTGGGCTCCAGGCAGGAGCCTCAGTGGGTTCGAAGACTTGATAACATGTGAGATAACTGATATGTGATGTCGGGCTATTCTTTCCCAAGGTTGTTTACGGGAATGCTTCCATAGATTagtatctctccatcttcccTCATGCTTGGTTGGCAGAGAAATGTGACTGTTGGCTTTGTACTTTTTTGGCAGCTTCATAAGCAAGGCTATTGAAAACCCTTGTTATTGTTTGAATGTAGTATGTTTTTGTCAATTTCTCACAAAACAAGACAAGCCACCACATTGGGTAACAGTTTTAATTCAACTATACCCTGGTCCATGGTACAAGGATGTGGGCTTCATTTCCTGTGTTCATAACCCTCAATGCATCTTGAAGAAATGTACTTTTAAAAAGAGGATATATAACATCCATTCAACTTTAAAATATATGTCTAACATCTTTGGAAGTTACCTACGGATCATGAAAACacagcagtaaaaataaaataaaaattgttgcACATAAAAACATTGTACAGTCCTGACATACTTCATTTAAATAAAAAGGCATCCCCTCA

Function

symbol description
hsd17b2 Predicted to enable steroid dehydrogenase activity. Is expressed in brain; heart; integument; pleuroperitoneal region; and trunk musculature. Orthologous to human HSD17B2 (hydroxysteroid 17-beta dehydrogenase 2).

NR:

description
estradiol 17-beta-dehydrogenase 2 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576291.2 False 1864 mRNA 0.48 5 89502075 89505984
XM_021576309.2 True 1679 mRNA 0.47 4 89502075 89505985

Neighbor

gene id symbol gene type direction distance location
LOC110499252 papd5 coding downstream 8905 89477010 ~ 89493170 (-)
LOC110502285 sall1 coding downstream 58431 89437266 ~ 89443782 (-)
LOC110499228 LOC106561526 coding downstream 293490 89205876 ~ 89208585 (-)
LOC110499212 faap24 coding downstream 374896 89124306 ~ 89127179 (-)
slc7a10b LOC106561521 coding downstream 377910 89106985 ~ 89124165 (-)
gpia LOC100196524 coding upstream 639 89506624 ~ 89528804 (-)
lsm14aa LOC106561533 coding upstream 32513 89538498 ~ 89555355 (-)
LOC110499327 LOC106561534 coding upstream 71809 89577794 ~ 89587145 (-)
LOC110499346 vps4a coding upstream 101269 89606837 ~ 89609890 (-)
LOC110499336 LOC106561536 coding upstream 104252 89610237 ~ 89709230 (-)
G201515 NA non-coding downstream 33927 89463194 ~ 89468148 (-)
G201506 NA non-coding downstream 50424 89451242 ~ 89451651 (-)
G201489 NA non-coding downstream 70784 89431061 ~ 89431291 (-)
G201485 NA non-coding downstream 79703 89420497 ~ 89422372 (-)
G201540 LOC106561532 non-coding upstream 52314 89558299 ~ 89559038 (-)
G201544 NA non-coding upstream 67969 89573954 ~ 89577425 (-)
G201561 NA non-coding upstream 88607 89594592 ~ 89595015 (-)
G201627 NA non-coding upstream 170046 89676031 ~ 89677465 (-)
G201667 LOC106561542 non-coding upstream 269514 89775499 ~ 89777092 (-)
G198912 NA other downstream 2175606 87322139 ~ 87326469 (-)
G198342 LOC100194703 other downstream 2598119 86903036 ~ 86903956 (-)
G197554 NA other downstream 3538410 85959845 ~ 85963665 (-)
G197498 slc25a18 other downstream 3658582 85831239 ~ 85843493 (-)
LOC110498022 LOC106561385 other downstream 4862319 84596433 ~ 84910878 (-)
G202279 NA other upstream 871572 90377557 ~ 90441425 (-)
G203915 rassf9 other upstream 2083227 91589212 ~ 91591049 (-)
G204024 NA other upstream 2281202 91787187 ~ 91788103 (-)
LOC110499897 LOC106573100 other upstream 2892075 92398054 ~ 92443838 (-)

Expression


Co-expression Network