XLOC_020725


Basic Information

Item Value
gene id XLOC_020725
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 2520932 ~ 2539642 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042284
agagtttgctctctatagaacaaaaattattggttttatttaatttaatattttcacacttATGGTGAAAAAGTGTCGTTACGGATGTGAcgaatgtgaaattgccacttgtgtgacgtTGGTAAagcaaatagaatagtttgaaaacactaaCAGATGAATTTGAGTGTTTCTAAAGTACTGTCAAATACTtgctacacaaaaaaaaaaacaagaaacgatttccgtattttggtaaaaacgtattttttttttatggcaagacTGACATATGCACAgaatttttcaaatatattctcGTCTGCAAATAGTCTTAAAACTTGATTTTGTGGTATAACAGAGgagtatttttctaattttgaGAATTTCCCCGTTCACCATTAACTGTCCTCATCTATTTCGAACTGTAATCGGAACTGGCTGGAACTGTTTTCactctagtgtggatcctcatgtgttgatgaaAATGTGATGATTgtttgaaactctttccacacgtagtacatgtgtacggtttctctccagtgtgaatcctcttatGTGATTTCAGAGTGTGTAACCGATTGAATGCCTtgctgcagtgtgaacacttgtacggtttctctccagtgtggatcatcttATGTGATTTAAAAGCGTGTAACTGACTGAatgtcttgtcgcagtgtgaacacttgtacggtttttctccagtgtgaatacTCTGATGTGATTTCAGGTTTTGTAACTTACTGAatgtcttgtcgcagtgtgaacacttgtaaggtctCTCTCCACTGTGAGTCCTCTGATGTGATTTCAGGTTTTGTAACTGATTGAatgtcttgtcgcagtgtgaacacttgtaaggtttctctccagtgtggatcctctggTGTTGTTTCAGGTTTTGTAAGTAAATGaagctcttgtcgcagtgtgaacacttg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042284 True 929 lncRNA 0.37 2 2520932 2539642

Neighbor

gene id symbol gene type direction distance location
XLOC_020723 NA coding downstream 24075 2466339 ~ 2496857 (-)
XLOC_020722 NA coding downstream 38443 2466273 ~ 2482489 (-)
XLOC_020716 NA coding downstream 87056 2209935 ~ 2433876 (-)
XLOC_020715 NA coding downstream 121888 2193464 ~ 2399044 (-)
XLOC_020721 NA coding downstream 172896 2266206 ~ 2348036 (-)
XLOC_020728 NA coding upstream 29535 2569177 ~ 2646010 (-)
XLOC_020729 NA coding upstream 59377 2599019 ~ 2623874 (-)
XLOC_020730 NA coding upstream 62575 2602217 ~ 2611809 (-)
XLOC_020731 NA coding upstream 163160 2702802 ~ 2791490 (-)
XLOC_020732 NA coding upstream 222448 2762090 ~ 2783884 (-)

Expression


Co-expression Network